Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02860.t01
CDS Infomation

cds chromosome:12X:3:2025302:2028933:-1 gene:VIT_03s0038g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCGGAATGCTGAATATGTGGGTTTGGAGGACGATGCTTCTCCCAAGTATGATAACTTC
AAGAAGGTTTCCATTATACCTCTTGTTTTCCTTATCTTCTATGAGGTCTCTGGGGGTCCG
TTCGGTGTTGAAGACACTGTCCAGGCAGCTGGCCCCCTTTTAGCTCTTCTTGGCTTTCTG
CTTTTCCCAGTTATATGGAGCATCCCAGAAGCCTTAATAACTGCAGAAATGGGTACAATG
TTCCCGGAGAATGGTGGATATGTGGTTTGGGTTTCTTCGGCTTTGGGCCCCTATTGGGGT
TTTCAGCAAGGTTGGATGAAGTGGTTGAGTGGAGTCATTGATAATGCGCTATACCCAGTT
CTGTTTCTAGATTATCTGAAATCAGCAATCCCAGGTTTAGAAGGTGGGTTGCCTAGGATA
ATAGCGGTTCTAGCTTTGACTCTGGCTCTCACTTACATGAACTACAGAGGTTTGACCATT
GTGGGATGGGTTGCTGTGCTATTAGGAGTGTTCTCAATTCTTCCTTTTGTCGTTATGGGA
CTGGTGGCAATTCCTGAACTGGAGCCTTCAAGATGGTTTGTTATAGACCTGCACAATGTA
AACTGGGGTTTGTATTTAAACACTCTCTTCTGGAATCTGAACTACTGGGACTCAATCAGT
ACTCTTGCAGGAGAGGTGGAGAACCCCAATAAAACTCTACCAAAAGCTCTTTTTTATGCT
CTTATTTTGGTTGTTCTAGGGTATTTTGTTCCTCTTCTGGTTGGTACAGGAGCTATACCA
CTTGATCGGGAGATGTGGGTTGATGGGTATTTCGCAGATATTGCTAAGATTCTAGGAGGT
ATATGGTTACGAAGTTGGATCCAAGGGGCCTCAGCTCTGTCAAACATGGGGATGTTTGTG
GCCGAGATGAGCAGTGACTCCTTTCAGCTTTTGGGGATGGCAGAACGTGGGATGCTCCCG
GATTTCTTTGCCAAGAGGTCTCGCTATGGGACCCCTCTTACTGGGATTTTATTTTCTGCA
TCTGGTGTGATTTTGCTCTCATGGTTGAGCTTTCAAGAGATTGTAGCTGCAGAGAACTTC
TTATACTGTTTTGGAATGATTATGGAATTCATAGCATTTGTAAAGTTAAGGATGAGATAC
CCAGCAGCATCCCGGCCTTATATGATACCTGTTGGTACAACTGGAGCAATTTTGATGTGT
ATACCCCCAACCTTATTGATTTGTGTGGTATTAGCTCTTGCTTCTTTCAAAGTCATGGTT
ATTAGTCTCTTGGCTGTGATGATTGGGCTTGTTATGCAGCCTTGTCTCCTTTATGCTGAG
AAAAAGAGATGGCTCAGGTTCTCCATGAGTTCTGACCTTCCAGATTTTCATTCTGCCTAC
CATGGAGATACCGAATCAGGGAAACAAAGAAGAGAAGAAGAAGAAGAAGAAGAAGACGGT
TTTGCTTCTCAATAA

Peptide Sequence

PEP ID

VIT_03s0038g02860.t01
PEP Infomation

pep chromosome:12X:3:2025302:2028933:-1 gene:VIT_03s0038g02860 transcript:VIT_03s0038g02860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRNAEYVGLEDDASPKYDNFKKVSIIPLVFLIFYEVSGGPFGVEDTVQAAGPLLALLGFL
LFPVIWSIPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPV
LFLDYLKSAIPGLEGGLPRIIAVLALTLALTYMNYRGLTIVGWVAVLLGVFSILPFVVMG
LVAIPELEPSRWFVIDLHNVNWGLYLNTLFWNLNYWDSISTLAGEVENPNKTLPKALFYA
LILVVLGYFVPLLVGTGAIPLDREMWVDGYFADIAKILGGIWLRSWIQGASALSNMGMFV
AEMSSDSFQLLGMAERGMLPDFFAKRSRYGTPLTGILFSASGVILLSWLSFQEIVAAENF
LYCFGMIMEFIAFVKLRMRYPAASRPYMIPVGTTGAILMCIPPTLLICVVLALASFKVMV
ISLLAVMIGLVMQPCLLYAEKKRWLRFSMSSDLPDFHSAYHGDTESGKQRREEEEEEEDG
FASQ

Transcript Sequence

Transcript ID

VIT_03s0038g02860.t01
Transcript Infomation

cdna chromosome:12X:3:2025302:2028933:-1 gene:VIT_03s0038g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTACCCCTTTAATGGTTAGCTGTTAGCACCACTATCTTGTTTTTCTTGTAGTCCGGAGCC
CCTTCTCCTCAAATTTGGTTGTTGGGTTTGTAAATTGTGTATCAAATTTGTGGGTTTGGT
GGTTTGACGACGAGAAACAGAGGAATTTAACAAATCAGCAAACTTCTGTCCAAATGCGGA
ATGCTGAATATGTGGGTTTGGAGGACGATGCTTCTCCCAAGTATGATAACTTCAAGAAGG
TTTCCATTATACCTCTTGTTTTCCTTATCTTCTATGAGGTCTCTGGGGGTCCGTTCGGTG
TTGAAGACACTGTCCAGGCAGCTGGCCCCCTTTTAGCTCTTCTTGGCTTTCTGCTTTTCC
CAGTTATATGGAGCATCCCAGAAGCCTTAATAACTGCAGAAATGGGTACAATGTTCCCGG
AGAATGGTGGATATGTGGTTTGGGTTTCTTCGGCTTTGGGCCCCTATTGGGGTTTTCAGC
AAGGTTGGATGAAGTGGTTGAGTGGAGTCATTGATAATGCGCTATACCCAGTTCTGTTTC
TAGATTATCTGAAATCAGCAATCCCAGGTTTAGAAGGTGGGTTGCCTAGGATAATAGCGG
TTCTAGCTTTGACTCTGGCTCTCACTTACATGAACTACAGAGGTTTGACCATTGTGGGAT
GGGTTGCTGTGCTATTAGGAGTGTTCTCAATTCTTCCTTTTGTCGTTATGGGACTGGTGG
CAATTCCTGAACTGGAGCCTTCAAGATGGTTTGTTATAGACCTGCACAATGTAAACTGGG
GTTTGTATTTAAACACTCTCTTCTGGAATCTGAACTACTGGGACTCAATCAGTACTCTTG
CAGGAGAGGTGGAGAACCCCAATAAAACTCTACCAAAAGCTCTTTTTTATGCTCTTATTT
TGGTTGTTCTAGGGTATTTTGTTCCTCTTCTGGTTGGTACAGGAGCTATACCACTTGATC
GGGAGATGTGGGTTGATGGGTATTTCGCAGATATTGCTAAGATTCTAGGAGGTATATGGT
TACGAAGTTGGATCCAAGGGGCCTCAGCTCTGTCAAACATGGGGATGTTTGTGGCCGAGA
TGAGCAGTGACTCCTTTCAGCTTTTGGGGATGGCAGAACGTGGGATGCTCCCGGATTTCT
TTGCCAAGAGGTCTCGCTATGGGACCCCTCTTACTGGGATTTTATTTTCTGCATCTGGTG
TGATTTTGCTCTCATGGTTGAGCTTTCAAGAGATTGTAGCTGCAGAGAACTTCTTATACT
GTTTTGGAATGATTATGGAATTCATAGCATTTGTAAAGTTAAGGATGAGATACCCAGCAG
CATCCCGGCCTTATATGATACCTGTTGGTACAACTGGAGCAATTTTGATGTGTATACCCC
CAACCTTATTGATTTGTGTGGTATTAGCTCTTGCTTCTTTCAAAGTCATGGTTATTAGTC
TCTTGGCTGTGATGATTGGGCTTGTTATGCAGCCTTGTCTCCTTTATGCTGAGAAAAAGA
GATGGCTCAGGTTCTCCATGAGTTCTGACCTTCCAGATTTTCATTCTGCCTACCATGGAG
ATACCGAATCAGGGAAACAAAGAAGAGAAGAAGAAGAAGAAGAAGAAGACGGTTTTGCTT
CTCAATAA