Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02680.t01
CDS Infomation

cds chromosome:12X:3:1897723:1903139:1 gene:VIT_03s0038g02680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGGCTGTTGGAGGGTAACGCCTTGCCTCTCCAGTGAGTACACAAGTGGGTTTTGC
TGCAGGGCAAATAATCTGCAGACCCATGTCAATGGAGTCGAGAACAAGAAGAAGAAGAAG
GTGGTTGTAGTTGGGTCTGGCTGGGCTGGACTTGGTGCTGCTCATCACCTCTGTAAGCAG
GGCTTTGAAGTCACAGTCCTTGAAGGTGGCAATGATCCTGAATCCAGGAAAATGCTGATT
CCTGATGATGTCGGTATTCATGGTTTCTGGTACCCCTATCGTAATATATTTAGCCTGGTT
GATGAGCTGGATATCAAGCCCTTCACAAACTGGACAAGTTCTGCCCACTATTCAGGAGAG
GGATTGGAGGTTGAATTTCCAATATTCCAAGATCTAACTCAACTACCGACTCCATTAGGA
ACGTTATTCTACACCCAATTTGTCCGGCTTCCATTACTGGATCGATTATCATCCCTTCCT
CTAATGGCTGCAGTTGTTGACTTCGACAACACTGACACTGCTTGGAGGAAATATGATTCA
ATTACTGCAAGGGAGCTTTTCAGACAGTTTGGCTTCTCACAGAGGCTCTATCAGGACGTT
TTTGATCCATTACTTCAAGTAGGTCTCTTTGCTCCAGCAGAGCAATGCAGTGCAGCTGCT
ACTCTGGGAATACTATACTATATTGTTCTTGCACACCAGAAAGATTTCGATTTTGTATGG
TGTCGTGGAACAGTCAGAGACAAGATTTTCAAGCCATGGATGGACTACATGAGAGCTAAT
GGTTGTGAATTTCTAGAGAGCAGAAGAGTGACAGATTTCTTATTTAATGAGGAAACAGGA
TGCATTTCAGAAGTAGTTTGTGGCAGAGAGAAGTACACAGCCGATGCAGTTGTATTAGCC
GTTGGGATCTCTACACTTCAGGATATCATTAAGAACAGTGCAGCATTAAGTACAAGGGAG
GAGTTTTTGAAAGTTCTAAACTTGGCTGGAATTGATGTTCTCACTGTTAAGCTCCAGTTT
GATCGAAAGGTTAACATTCCAAAAGCAGTTAATACTTGCTCTGGTTTTGATGATTCATGT
GGCTGGACTTACTTTGACCTGAATGCAATCCATGACGAGTATAAAGATGATCCAGTGACA
GTCTTACAAGCTAATTTTTATCATGCAAATGAGTTGCTGCTGCTGAAAGATGAGCTCATA
GCTGCAAAAGTGATGCATCAGCTTTCAAAGTACATCAAGGACTTGGAGAACGCTTCAGTT
GTTGGTCAGGAGATTGAAAGATTTCCAAAGTCTTTGACTCACTTTTTTCCAGGTTCATAC
AAATACATGATGCGTGGATCGACATCTTTTCCAAACTTGTTCATGGCGGGGGATTGGATC
GTAACCCGACATGGTTCATGGCTTCAGGAGAAATCATATGTGACCGGACTTGAAGCAGCT
AACAGGGTTGTGGACTACCTGGAGGAAGGGAGTTTTGCTAAGATAATACCGGTGGAAGAA
GACGAACCCCACATTCAAGCTCTTCGAAACCTTAACAGAAACCTTAATGATGTAAAAGCT
CAGCTGCCATGGTCTGATTATTTCCTCCCTTGA

Peptide Sequence

PEP ID

VIT_03s0038g02680.t01
PEP Infomation

pep chromosome:12X:3:1897723:1903139:1 gene:VIT_03s0038g02680 transcript:VIT_03s0038g02680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLGCWRVTPCLSSEYTSGFCCRANNLQTHVNGVENKKKKKVVVVGSGWAGLGAAHHLCKQ
GFEVTVLEGGNDPESRKMLIPDDVGIHGFWYPYRNIFSLVDELDIKPFTNWTSSAHYSGE
GLEVEFPIFQDLTQLPTPLGTLFYTQFVRLPLLDRLSSLPLMAAVVDFDNTDTAWRKYDS
ITARELFRQFGFSQRLYQDVFDPLLQVGLFAPAEQCSAAATLGILYYIVLAHQKDFDFVW
CRGTVRDKIFKPWMDYMRANGCEFLESRRVTDFLFNEETGCISEVVCGREKYTADAVVLA
VGISTLQDIIKNSAALSTREEFLKVLNLAGIDVLTVKLQFDRKVNIPKAVNTCSGFDDSC
GWTYFDLNAIHDEYKDDPVTVLQANFYHANELLLLKDELIAAKVMHQLSKYIKDLENASV
VGQEIERFPKSLTHFFPGSYKYMMRGSTSFPNLFMAGDWIVTRHGSWLQEKSYVTGLEAA
NRVVDYLEEGSFAKIIPVEEDEPHIQALRNLNRNLNDVKAQLPWSDYFLP

Transcript Sequence

Transcript ID

VIT_03s0038g02680.t01
Transcript Infomation

cdna chromosome:12X:3:1897723:1903139:1 gene:VIT_03s0038g02680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAGTTGAAAGCCGTTAGAGAGGAGATAAAGATGTTGGGCTGTTGGAGGGTAACGCCTT
GCCTCTCCAGTGAGTACACAAGTGGGTTTTGCTGCAGGGCAAATAATCTGCAGACCCATG
TCAATGGAGTCGAGAACAAGAAGAAGAAGAAGGTGGTTGTAGTTGGGTCTGGCTGGGCTG
GACTTGGTGCTGCTCATCACCTCTGTAAGCAGGGCTTTGAAGTCACAGTCCTTGAAGGTG
GCAATGATCCTGAATCCAGGAAAATGCTGATTCCTGATGATGTCGGTATTCATGGTTTCT
GGTACCCCTATCGTAATATATTTAGCCTGGTTGATGAGCTGGATATCAAGCCCTTCACAA
ACTGGACAAGTTCTGCCCACTATTCAGGAGAGGGATTGGAGGTTGAATTTCCAATATTCC
AAGATCTAACTCAACTACCGACTCCATTAGGAACGTTATTCTACACCCAATTTGTCCGGC
TTCCATTACTGGATCGATTATCATCCCTTCCTCTAATGGCTGCAGTTGTTGACTTCGACA
ACACTGACACTGCTTGGAGGAAATATGATTCAATTACTGCAAGGGAGCTTTTCAGACAGT
TTGGCTTCTCACAGAGGCTCTATCAGGACGTTTTTGATCCATTACTTCAAGTAGGTCTCT
TTGCTCCAGCAGAGCAATGCAGTGCAGCTGCTACTCTGGGAATACTATACTATATTGTTC
TTGCACACCAGAAAGATTTCGATTTTGTATGGTGTCGTGGAACAGTCAGAGACAAGATTT
TCAAGCCATGGATGGACTACATGAGAGCTAATGGTTGTGAATTTCTAGAGAGCAGAAGAG
TGACAGATTTCTTATTTAATGAGGAAACAGGATGCATTTCAGAAGTAGTTTGTGGCAGAG
AGAAGTACACAGCCGATGCAGTTGTATTAGCCGTTGGGATCTCTACACTTCAGGATATCA
TTAAGAACAGTGCAGCATTAAGTACAAGGGAGGAGTTTTTGAAAGTTCTAAACTTGGCTG
GAATTGATGTTCTCACTGTTAAGCTCCAGTTTGATCGAAAGGTTAACATTCCAAAAGCAG
TTAATACTTGCTCTGGTTTTGATGATTCATGTGGCTGGACTTACTTTGACCTGAATGCAA
TCCATGACGAGTATAAAGATGATCCAGTGACAGTCTTACAAGCTAATTTTTATCATGCAA
ATGAGTTGCTGCTGCTGAAAGATGAGCTCATAGCTGCAAAAGTGATGCATCAGCTTTCAA
AGTACATCAAGGACTTGGAGAACGCTTCAGTTGTTGGTCAGGAGATTGAAAGATTTCCAA
AGTCTTTGACTCACTTTTTTCCAGGTTCATACAAATACATGATGCGTGGATCGACATCTT
TTCCAAACTTGTTCATGGCGGGGGATTGGATCGTAACCCGACATGGTTCATGGCTTCAGG
AGAAATCATATGTGACCGGACTTGAAGCAGCTAACAGGGTTGTGGACTACCTGGAGGAAG
GGAGTTTTGCTAAGATAATACCGGTGGAAGAAGACGAACCCCACATTCAAGCTCTTCGAA
ACCTTAACAGAAACCTTAATGATGTAAAAGCTCAGCTGCCATGGTCTGATTATTTCCTCC
CTTGAGGCCATTCTTTGATCATCAGCTCATGTCATATTTGAATTTGTATTTATACTAATG
ATTTTGTGTTTGTTTTCTTGGAGTGGAGAGGAAATAGATGATAGAAGGAATGACTAAAAT
TTTACTGTATCGAGATCTTAATATCAGTCATTAGATTTTAATATACAATGCAACTCTTTG
TGTATCA