Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02590.t01
CDS Infomation

cds chromosome:12X:3:1801880:1806519:-1 gene:VIT_03s0038g02590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTCAAGATGTGGAAATGAAAGAGCTTCCAGCTCCTTCAAATTCTGTTACTTCTACT
ACTCCTTCAACACTGCAGCATTTGAAGGAGATAGCGTCACTCATCGAGAGCAGCGCGTAT
GCTCGGGAGGTTCGCCGCATTGTGCGCGCCATTCGGCTTACCATGATATTGAGGCGGAAG
CTGAAGGCGACTGTGCTCTCTGGATTCCTAAATTATGCCCTTAACCCAGGATCGGAGGTG
CACACCCGGTTGTCCTCGTATCTTCCCAAGGAAGATGAACATGACATGGAAGTTGATACT
GCAACATCTGCAACTCAAACTCCTGCAAAACACCCCTTGCCAGAACTTGAGATTTACTGC
TACTTGCTAGTTCTGATTTTTCTGATTGATCAGAAGAAGTACAAAGAGGCTAAAGCTTGT
TCCGCAGCAAGCATCACACGGCTGAAGAATCTGAATCGGAGAACCATTGATGTTCTGGCA
TCCAGGCTTTATTCTTATTACTCTCTTAGCTATGAACTCACAGGTGATCTTGCTGAGATT
CGAGGTAACCTCCTTGCCTTGCATCGGATTGCAACATTGCGCCATGATGAGCTGGGTCAG
GAAACACTTCTAAACCTGCTTCTGCGTAATTACCTCCATTACAACTTGTATGATCAGGCT
GAGAAACTGAGGTCAAAGGCACCTCGTTTTGAAGCTCATTCAAATCAGCAGTTTTGTCGC
TACCTCTTCTACCTAGGAAAGATTAGGACAATTCAGTTGGAGTACACAGATGCAAAAGAG
TCCCTCCTGCAAGCTGCTCGGAAAGCCCCTGTTTCAGCCCTTGGTTTTCGAGTTCAATGC
AACAAGTGGGCTGTGATAGTCCGCCTCCTGCTGGGCGAAATCCCTGAAAGGACTGTTTTT
ATGCAGAAGGGCATGGAGAAGGCTTTGAGGCCCTACTTTGAGCTTACAAATGCTGTGCGA
ATTGGAGATCTGGAGCTCTTCAAGTCTGTTGCTGAGAAGTTCTCAACTACTTTCAGTTCA
GATCGCACACACAATTTGATTGTTAGGCTGCGGCATAATGTCATAAGGACTGGGCTACGC
AATATCAGTATCTCGTATTCTCGAATCTCACTGGCGGATGTTGCCCAGAAGCTGAGATTG
GACTCTGCAAATCCTATTGCTGATGCTGAGAGCATTGTAGCCAAGGCAATACGAGATGGT
GCAATTGACGCCACATTGGATCATGCAAATGGGTGGATGGTATCCAAGGAGACAGGGGAC
ATCTACTCCACCAACGAACCTCAATTTGCATTTAACTCAAGAATTGCCTTTTGCCTTAAC
ATGCACAACGATGCAGTGCGTGCCCTTCGGTTTCCCCCTAATTCCCACAAGGAGAAAGAA
AGTGCTGAGAAGAGGAGAGAGAGACAACAGCAGGAGCAAGAGCTTGCAAAGCATATTGCT
GAGGAGGACGACGATGAGTTCTAA

Peptide Sequence

PEP ID

VIT_03s0038g02590.t01
PEP Infomation

pep chromosome:12X:3:1801880:1806519:-1 gene:VIT_03s0038g02590 transcript:VIT_03s0038g02590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTQDVEMKELPAPSNSVTSTTPSTLQHLKEIASLIESSAYAREVRRIVRAIRLTMILRRK
LKATVLSGFLNYALNPGSEVHTRLSSYLPKEDEHDMEVDTATSATQTPAKHPLPELEIYC
YLLVLIFLIDQKKYKEAKACSAASITRLKNLNRRTIDVLASRLYSYYSLSYELTGDLAEI
RGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCR
YLFYLGKIRTIQLEYTDAKESLLQAARKAPVSALGFRVQCNKWAVIVRLLLGEIPERTVF
MQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSTTFSSDRTHNLIVRLRHNVIRTGLR
NISISYSRISLADVAQKLRLDSANPIADAESIVAKAIRDGAIDATLDHANGWMVSKETGD
IYSTNEPQFAFNSRIAFCLNMHNDAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHIA
EEDDDEF

Transcript Sequence

Transcript ID

VIT_03s0038g02590.t01
Transcript Infomation

cdna chromosome:12X:3:1801880:1806519:-1 gene:VIT_03s0038g02590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCAATCAACGAATCTGAGTGCAAGAAACTGGCTGAAACCCTAGTTTCTTCATCAGATCA
TCGCTAATTTTGGCCAATTTATTTGGAAATTCAAGGAGCAATTTTGGAAGATGACTCAAG
ATGTGGAAATGAAAGAGCTTCCAGCTCCTTCAAATTCTGTTACTTCTACTACTCCTTCAA
CACTGCAGCATTTGAAGGAGATAGCGTCACTCATCGAGAGCAGCGCGTATGCTCGGGAGG
TTCGCCGCATTGTGCGCGCCATTCGGCTTACCATGATATTGAGGCGGAAGCTGAAGGCGA
CTGTGCTCTCTGGATTCCTAAATTATGCCCTTAACCCAGGATCGGAGGTGCACACCCGGT
TGTCCTCGTATCTTCCCAAGGAAGATGAACATGACATGGAAGTTGATACTGCAACATCTG
CAACTCAAACTCCTGCAAAACACCCCTTGCCAGAACTTGAGATTTACTGCTACTTGCTAG
TTCTGATTTTTCTGATTGATCAGAAGAAGTACAAAGAGGCTAAAGCTTGTTCCGCAGCAA
GCATCACACGGCTGAAGAATCTGAATCGGAGAACCATTGATGTTCTGGCATCCAGGCTTT
ATTCTTATTACTCTCTTAGCTATGAACTCACAGGTGATCTTGCTGAGATTCGAGGTAACC
TCCTTGCCTTGCATCGGATTGCAACATTGCGCCATGATGAGCTGGGTCAGGAAACACTTC
TAAACCTGCTTCTGCGTAATTACCTCCATTACAACTTGTATGATCAGGCTGAGAAACTGA
GGTCAAAGGCACCTCGTTTTGAAGCTCATTCAAATCAGCAGTTTTGTCGCTACCTCTTCT
ACCTAGGAAAGATTAGGACAATTCAGTTGGAGTACACAGATGCAAAAGAGTCCCTCCTGC
AAGCTGCTCGGAAAGCCCCTGTTTCAGCCCTTGGTTTTCGAGTTCAATGCAACAAGTGGG
CTGTGATAGTCCGCCTCCTGCTGGGCGAAATCCCTGAAAGGACTGTTTTTATGCAGAAGG
GCATGGAGAAGGCTTTGAGGCCCTACTTTGAGCTTACAAATGCTGTGCGAATTGGAGATC
TGGAGCTCTTCAAGTCTGTTGCTGAGAAGTTCTCAACTACTTTCAGTTCAGATCGCACAC
ACAATTTGATTGTTAGGCTGCGGCATAATGTCATAAGGACTGGGCTACGCAATATCAGTA
TCTCGTATTCTCGAATCTCACTGGCGGATGTTGCCCAGAAGCTGAGATTGGACTCTGCAA
ATCCTATTGCTGATGCTGAGAGCATTGTAGCCAAGGCAATACGAGATGGTGCAATTGACG
CCACATTGGATCATGCAAATGGGTGGATGGTATCCAAGGAGACAGGGGACATCTACTCCA
CCAACGAACCTCAATTTGCATTTAACTCAAGAATTGCCTTTTGCCTTAACATGCACAACG
ATGCAGTGCGTGCCCTTCGGTTTCCCCCTAATTCCCACAAGGAGAAAGAAAGTGCTGAGA
AGAGGAGAGAGAGACAACAGCAGGAGCAAGAGCTTGCAAAGCATATTGCTGAGGAGGACG
ACGATGAGTTCTAATGGAGTCCTTAAGGGCAATGCACTTTATGGTGGTGTAGCTTCCTTG
GAAATTCCTTAACAAGGGTGGATGGCTATCACCTTTTTTAGCTGTTGCTTTCAACTTTGT
GAGTTACATTGTTTTAGGCCTTTGTGCTAACTGTTTCTCTATTCTGAATTACATCCTGGG
TTGTCATCTGGATTCAGATTT