Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02530.t01
CDS Infomation

cds chromosome:12X:3:1764693:1767496:-1 gene:VIT_03s0038g02530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAAACCTGAATATATGGTCTTTTGAGTTTCATATGCAATTGGGTGGTGGTATACAA
GAAAGTGAACTCAGCAAAAAGATGGCTGGAGAAAGAAGAGTGCATCCAGATTGCATAAAT
GCATCTAATCCCTATCATGAGTGTGTTGAATATTGCTTTAGAAAAATTGCCGAAGCCAAG
GCACAGATGGATAAAAAGGAGTCAGAAGTCATGGAAGCTGGTAGTGGCAGTGGTGGCGGC
AATGATCAATACATTTCAGGTGTCCCTGATCAGGATAAAAATACACATGATGAAGGAACG
GATCCTGAAGAACGGTCTGATGACGACAATGATCAACCTGTTGAGGAGATTGAGGAAGTA
GACTTCACACAACTCACGGGGAGGCAGAAAAAGTTGTTTGAGTTAAGACTTAAGATGAAT
GAGGCAAGAAAAGCCAATCAGACAGCCATGGTGGCTGAGAAGAAAAAAATGGAAGCTCCA
CCAGAGTCAAGGGGCATTTCTAAACAAAAATGGATCGAGGAGAGGAAGAAAAAAATTGGC
AAACTTCTAGATGTTAATGGTCTGGATATGAAAAAGGCATATATGCTAGATACACAAGAA
ATGGCAGAGACAAAATATAAGAAATGGGAAAAGGATCCTGCTCCATTTGGTTGGGATGTT
TTCAATCAGAAAACATTGTACAATGCATACAAGAAGCGAACAAAGAATATTGAGGTTGAC
ATCGATGAATATAATAAGATGAAAGAAGCCGACCCAGAATTCTATCGCGAAGCTTCAAGC
CTTCAATATGGGAAGGCACCAAAGTGCTCAGAAGATAAGATTGACAAGATGGTTAAGGAA
CTCAAGGACCGGGACGAGAAGCGCCAGTCATTTAGCAGGAGGAGGAAGTTCCATGAAGAG
AAGGACATCGACTCCATCAATGACCGTAACGAGCATTTCAACAAGAAGATCGAGCGAGCA
TTTGGTAAATATACACTGGAGATCAAAAACAATCTTGAGAGAGGAACTGCCCTTCCTGAC
TAA

Peptide Sequence

PEP ID

VIT_03s0038g02530.t01
PEP Infomation

pep chromosome:12X:3:1764693:1767496:-1 gene:VIT_03s0038g02530 transcript:VIT_03s0038g02530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKNLNIWSFEFHMQLGGGIQESELSKKMAGERRVHPDCINASNPYHECVEYCFRKIAEAK
AQMDKKESEVMEAGSGSGGGNDQYISGVPDQDKNTHDEGTDPEERSDDDNDQPVEEIEEV
DFTQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIG
KLLDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNIEVD
IDEYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKELKDRDEKRQSFSRRRKFHEE
KDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD

Transcript Sequence

Transcript ID

VIT_03s0038g02530.t01
Transcript Infomation

cdna chromosome:12X:3:1764693:1767496:-1 gene:VIT_03s0038g02530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAAACCTGAATATATGGTCTTTTGAGTTTCATATGCAATTGGGTGGTGGTATACAA
GAAAGTGAACTCAGCAAAAAGATGGCTGGAGAAAGAAGAGTGCATCCAGATTGCATAAAT
GCATCTAATCCCTATCATGAGTGTGTTGAATATTGCTTTAGAAAAATTGCCGAAGCCAAG
GCACAGATGGATAAAAAGGAGTCAGAAGTCATGGAAGCTGGTAGTGGCAGTGGTGGCGGC
AATGATCAATACATTTCAGGTGTCCCTGATCAGGATAAAAATACACATGATGAAGGAACG
GATCCTGAAGAACGGTCTGATGACGACAATGATCAACCTGTTGAGGAGATTGAGGAAGTA
GACTTCACACAACTCACGGGGAGGCAGAAAAAGTTGTTTGAGTTAAGACTTAAGATGAAT
GAGGCAAGAAAAGCCAATCAGACAGCCATGGTGGCTGAGAAGAAAAAAATGGAAGCTCCA
CCAGAGTCAAGGGGCATTTCTAAACAAAAATGGATCGAGGAGAGGAAGAAAAAAATTGGC
AAACTTCTAGATGTTAATGGTCTGGATATGAAAAAGGCATATATGCTAGATACACAAGAA
ATGGCAGAGACAAAATATAAGAAATGGGAAAAGGATCCTGCTCCATTTGGTTGGGATGTT
TTCAATCAGAAAACATTGTACAATGCATACAAGAAGCGAACAAAGAATATTGAGGTTGAC
ATCGATGAATATAATAAGATGAAAGAAGCCGACCCAGAATTCTATCGCGAAGCTTCAAGC
CTTCAATATGGGAAGGCACCAAAGTGCTCAGAAGATAAGATTGACAAGATGGTTAAGGAA
CTCAAGGACCGGGACGAGAAGCGCCAGTCATTTAGCAGGAGGAGGAAGTTCCATGAAGAG
AAGGACATCGACTCCATCAATGACCGTAACGAGCATTTCAACAAGAAGATCGAGCGAGCA
TTTGGTAAATATACACTGGAGATCAAAAACAATCTTGAGAGAGGAACTGCCCTTCCTGAC
TAAGGTCTTTGCTCATTTTAGTGCAGTATGTGTGAAACTCTTTGGTCTCTAATTGTACAA
GTTATCTGTCCAACAATGGCATATTCCACCCTGGTCTTTCTGTACTTTTTTGGAGTATAC
ATGTATGGGATAGATTTGATGTAACAGAG