Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02510.t01
CDS Infomation

cds chromosome:12X:3:1749658:1752878:-1 gene:VIT_03s0038g02510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAAGCCAGTTTCAATTGAGGTTTGGAACCCCTGTGGGAAATACAGAGTTGTCAGC
ACAAAACCGATGCCGGGAACCCGCTGGATCGATCTATTAGTCCAACAAGATTGTAGAGTT
GAAATATGTACCCAGAAGAAAACAATCTTGTCTGTTGAAGATATCATTGCTCTTATTGGT
GATAAGTGTGATGGAGTGATTGGACAGTTGACAGAAGATTGGGGGGAGACGCTGTTTTCG
GCTTTGAGCAGGGCTGGAGGCAGGGCTTTTAGCAACATGGCTGTTGGATACAACAATGTT
GATGTGAATGCTGCTAATAAGTACGGTGTTGCTGTTGGGAACACTCCAGGAGTACTTACA
GAGACTACAGCAGAGCTAGCAGCCTCACTTTCTATGGCAGCTGCTCGAAGAATAGTTGAA
GCAGATGAGTTCATGAGGGCAGGCTTATACGATGGATGGCTTCCTCATCTGTTTGTGGGG
AATTTGCTCAGAGGACAGACTGTTGGTGTGATTGGAGCAGGTCGTATTGGATCTGCGTAT
GCTAGAATGATGGTAGAAGGGTTCAAAATGAACCTGATTTACTATGATCTGTACCAAGCC
ACACGCCTGGAGAAGTTTGTTACAGCTTATGGTCAGTTCCTGAAAGCCAGTGGTGAACAA
CCAGTGACCTGGAAAAGAGCTGCAAGTATGGATGAGGTGCTCCGAGAGGCTGATCTTATT
AGTCTCCATCCAGTATTGGATAAGACCACTTATCATCTAGTCAACAAGGAAAGGCTCTCA
ATGATGAAGAAGGAAGCGATCCTTATAAACTGCAGCAGAGGGCCTGTGATTGATGAAGTA
GCTTTGGTGGCACATCTGAAAGAGAACCCCATGTTTCGAGTTGGACTTGATGTCTTTGAG
GATGAACCTTACATGAAACCTGGTCTTGCTGAAATGAAGAACGCGATCGTGGTACCTCAC
ATTGCTTCTGCTTCCAAGTGGACTCGCGAAGGAATGGCTACATTGGCTGCTCTGAATGTC
CTGGGAAAGATCAAAGGATACCCAATTTGGCATGATCCAAATAAGGTTGAACCATTCCTC
AACGAGAACTCCCTGCCCCCAGCTGCATCTCCAAGTATAGTCAATGCAAAAGCCTTAGGT
TTGCCTGTTTCAAAGCTATGA

Peptide Sequence

PEP ID

VIT_03s0038g02510.t01
PEP Infomation

pep chromosome:12X:3:1749658:1752878:-1 gene:VIT_03s0038g02510 transcript:VIT_03s0038g02510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKPVSIEVWNPCGKYRVVSTKPMPGTRWIDLLVQQDCRVEICTQKKTILSVEDIIALIG
DKCDGVIGQLTEDWGETLFSALSRAGGRAFSNMAVGYNNVDVNAANKYGVAVGNTPGVLT
ETTAELAASLSMAAARRIVEADEFMRAGLYDGWLPHLFVGNLLRGQTVGVIGAGRIGSAY
ARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKASGEQPVTWKRAASMDEVLREADLI
SLHPVLDKTTYHLVNKERLSMMKKEAILINCSRGPVIDEVALVAHLKENPMFRVGLDVFE
DEPYMKPGLAEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPIWHDPNKVEPFL
NENSLPPAASPSIVNAKALGLPVSKL

Transcript Sequence

Transcript ID

VIT_03s0038g02510.t01
Transcript Infomation

cdna chromosome:12X:3:1749658:1752878:-1 gene:VIT_03s0038g02510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTCCAATTCCTGAGCTGCTTCTAGCTTCCATGGCCAAGCCAGTTTCAATTGAGGTTTG
GAACCCCTGTGGGAAATACAGAGTTGTCAGCACAAAACCGATGCCGGGAACCCGCTGGAT
CGATCTATTAGTCCAACAAGATTGTAGAGTTGAAATATGTACCCAGAAGAAAACAATCTT
GTCTGTTGAAGATATCATTGCTCTTATTGGTGATAAGTGTGATGGAGTGATTGGACAGTT
GACAGAAGATTGGGGGGAGACGCTGTTTTCGGCTTTGAGCAGGGCTGGAGGCAGGGCTTT
TAGCAACATGGCTGTTGGATACAACAATGTTGATGTGAATGCTGCTAATAAGTACGGTGT
TGCTGTTGGGAACACTCCAGGAGTACTTACAGAGACTACAGCAGAGCTAGCAGCCTCACT
TTCTATGGCAGCTGCTCGAAGAATAGTTGAAGCAGATGAGTTCATGAGGGCAGGCTTATA
CGATGGATGGCTTCCTCATCTGTTTGTGGGGAATTTGCTCAGAGGACAGACTGTTGGTGT
GATTGGAGCAGGTCGTATTGGATCTGCGTATGCTAGAATGATGGTAGAAGGGTTCAAAAT
GAACCTGATTTACTATGATCTGTACCAAGCCACACGCCTGGAGAAGTTTGTTACAGCTTA
TGGTCAGTTCCTGAAAGCCAGTGGTGAACAACCAGTGACCTGGAAAAGAGCTGCAAGTAT
GGATGAGGTGCTCCGAGAGGCTGATCTTATTAGTCTCCATCCAGTATTGGATAAGACCAC
TTATCATCTAGTCAACAAGGAAAGGCTCTCAATGATGAAGAAGGAAGCGATCCTTATAAA
CTGCAGCAGAGGGCCTGTGATTGATGAAGTAGCTTTGGTGGCACATCTGAAAGAGAACCC
CATGTTTCGAGTTGGACTTGATGTCTTTGAGGATGAACCTTACATGAAACCTGGTCTTGC
TGAAATGAAGAACGCGATCGTGGTACCTCACATTGCTTCTGCTTCCAAGTGGACTCGCGA
AGGAATGGCTACATTGGCTGCTCTGAATGTCCTGGGAAAGATCAAAGGATACCCAATTTG
GCATGATCCAAATAAGGTTGAACCATTCCTCAACGAGAACTCCCTGCCCCCAGCTGCATC
TCCAAGTATAGTCAATGCAAAAGCCTTAGGTTTGCCTGTTTCAAAGCTATGAGCAGGAGG
GGTTGAACACAAATGGCCTAGTTGCTGCAAAGAGAGTGTTTTGGAGGAGTGGTGATAATA
GGCTATTTGCTCCATCTTGTTCACACTGGCTTTTCATCTAATGTAAGCATAATTATATAT
AGGTTTATCAGTTGAATTGGGAACTCAATCCTCTTGGTTTCTTTGGTAATGAGACTCAAA
GTTGTTGATGAATTGGTAGCATGTCTACTACTTTAGTTCTTCCATGCAGTCATTCCTAGA
AACA