Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02330.t01
CDS Infomation

cds chromosome:12X:3:1595396:1600087:-1 gene:VIT_03s0038g02330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGATTCGTCAGTAGTATATTGGGACTTTTTGGGTTCGGAGTGGGGATTTCTATTGGG
CTTTTGGTTGGGTATTTTTTCTTTATCTACTTCGAATCCAGCGATGTCAAGGACCCCGAT
ATTCGCCCATTAGCCGAGCAGGACTCAGAAAGCTTGCAGCGGTTGCTTCCAGAGCTACCC
CTTTGGGTGAAAAATCCCGATTTTGATCGTGTTGACTGGCTGAACAAGTTTATTGAATAC
ATGTGGCCTTATCTGGATAAGGCAATTTGCAAGACTGTAAAAGATACCGCAGCACCGATC
ATTGCTGAGCAAATTCTAAAGTATAAGATCGATGCAGTCGAATTTAAAACACTTACATTA
GGATCCCTACCACCAACTTTTCAAGGGATAAAAGTCTATTCTACTGATGAGAAGGAGTTG
ATCATGGAGCCATGCTTGAAATGGGCAGCAAATCCAAATGTGACTGTTGCTGTTAAAGCT
TTTGGGTTGAAAGCAACTGCTCAGGTGGTGGATTTGCAAGTCTTTGCTCTACCACGTATT
ACCATGAAGCCGTTGGTTCCTAGTTTTCCCTGCTTTGCCAACATCTTCGTGTCTCTAATG
GAGAAGCCTCATGTTGATTTTGGACTAAAGCTTCTAGGGGCTGATCTTATGTCAATCCCT
GGGCTCTACCGGTTTGTTCAGGAGCTTATCAAGGAACAGGTTGCCAACATGTATCTCTGG
CCAAGAACCCTTGACGTACAAATTTTAGACATAGCCAACGCAATGAAGAGGCCTGTAGGA
ATTCTCACTGTTAAGGTTCTGAGGGCGATGAAACTCAAAAAGAAAGATCTCTTGGGAGCA
TCAGACCCCTATGTAAAACTAAGACTTACTGAAGACAAGCTTCCATCGAAGAAGACTACT
GTGAAGCACAAAAACTTGAATCCTGAATGGAATGAAGAGTTTAACTTAGTTGTCAGAGTT
CCCGGGGTGCAAGCTTTAGAGCTTTGTGTTTATGACTGGGAGCAGGTTGGGAAACATGAC
AAGATGGGAATGAACGTCGTGCCTTTGAAAGAACTTCCTCCGGATGAGCCAAAGATGATG
ACTCTTGACCTCCTTAAGAGCCTGGATCCAAACGATTCTCAAAATGACAAAGGCCGTGGA
CAGCTTGAGGTGGAATTGACATACAAACCTTTCAAGGAGGAGGACATGGTGAAGGAGAGT
GATGATTTAGGTACACTGGAGAAGGCTCCTGAAGGAACACCACCTGGTGGAGGTCTGCTT
GTGGTCATAGTCCATGAAGCACAAGATTTGGAAGGAAAGCACCATACTAATCCACTTGTC
CGGATTCTTTTCAGAGGGGAGGAGAGAAAAACTAAGCCAATAAAGAAGAGCAGAGATCCA
AGATGGCAAGAGGAGTTCCAGTTTATGCTGGAGGAACCTCCCATTAACGATAAACTGCAT
GTGGAAGTCATCAGTACCTCCAAGAGGATCGGCCTGCTGCATCCTAAGGAATCTCTGGGG
TACATAGTTGTCAATCTTGCTGATGTCGTGACCAACAAACGGATCAACGAGAAGTACCAC
CTGATAGACTCAAAGAATGGGCAGATTCAGATTGAGCTGCAGTGGAGAACTAGTTCCTGA

Peptide Sequence

PEP ID

VIT_03s0038g02330.t01
PEP Infomation

pep chromosome:12X:3:1595396:1600087:-1 gene:VIT_03s0038g02330 transcript:VIT_03s0038g02330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFVSSILGLFGFGVGISIGLLVGYFFFIYFESSDVKDPDIRPLAEQDSESLQRLLPELP
LWVKNPDFDRVDWLNKFIEYMWPYLDKAICKTVKDTAAPIIAEQILKYKIDAVEFKTLTL
GSLPPTFQGIKVYSTDEKELIMEPCLKWAANPNVTVAVKAFGLKATAQVVDLQVFALPRI
TMKPLVPSFPCFANIFVSLMEKPHVDFGLKLLGADLMSIPGLYRFVQELIKEQVANMYLW
PRTLDVQILDIANAMKRPVGILTVKVLRAMKLKKKDLLGASDPYVKLRLTEDKLPSKKTT
VKHKNLNPEWNEEFNLVVRVPGVQALELCVYDWEQVGKHDKMGMNVVPLKELPPDEPKMM
TLDLLKSLDPNDSQNDKGRGQLEVELTYKPFKEEDMVKESDDLGTLEKAPEGTPPGGGLL
VVIVHEAQDLEGKHHTNPLVRILFRGEERKTKPIKKSRDPRWQEEFQFMLEEPPINDKLH
VEVISTSKRIGLLHPKESLGYIVVNLADVVTNKRINEKYHLIDSKNGQIQIELQWRTSS

Transcript Sequence

Transcript ID

VIT_03s0038g02330.t01
Transcript Infomation

cdna chromosome:12X:3:1595396:1600087:-1 gene:VIT_03s0038g02330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGATTTGTGATGGGATTCGTCAGTAGTATATTGGGACTTTTTGGGTTCGGAGTGGGGAT
TTCTATTGGGCTTTTGGTTGGGTATTTTTTCTTTATCTACTTCGAATCCAGCGATGTCAA
GGACCCCGATATTCGCCCATTAGCCGAGCAGGACTCAGAAAGCTTGCAGCGGTTGCTTCC
AGAGCTACCCCTTTGGGTGAAAAATCCCGATTTTGATCGTGTTGACTGGCTGAACAAGTT
TATTGAATACATGTGGCCTTATCTGGATAAGGCAATTTGCAAGACTGTAAAAGATACCGC
AGCACCGATCATTGCTGAGCAAATTCTAAAGTATAAGATCGATGCAGTCGAATTTAAAAC
ACTTACATTAGGATCCCTACCACCAACTTTTCAAGGGATAAAAGTCTATTCTACTGATGA
GAAGGAGTTGATCATGGAGCCATGCTTGAAATGGGCAGCAAATCCAAATGTGACTGTTGC
TGTTAAAGCTTTTGGGTTGAAAGCAACTGCTCAGGTGGTGGATTTGCAAGTCTTTGCTCT
ACCACGTATTACCATGAAGCCGTTGGTTCCTAGTTTTCCCTGCTTTGCCAACATCTTCGT
GTCTCTAATGGAGAAGCCTCATGTTGATTTTGGACTAAAGCTTCTAGGGGCTGATCTTAT
GTCAATCCCTGGGCTCTACCGGTTTGTTCAGGAGCTTATCAAGGAACAGGTTGCCAACAT
GTATCTCTGGCCAAGAACCCTTGACGTACAAATTTTAGACATAGCCAACGCAATGAAGAG
GCCTGTAGGAATTCTCACTGTTAAGGTTCTGAGGGCGATGAAACTCAAAAAGAAAGATCT
CTTGGGAGCATCAGACCCCTATGTAAAACTAAGACTTACTGAAGACAAGCTTCCATCGAA
GAAGACTACTGTGAAGCACAAAAACTTGAATCCTGAATGGAATGAAGAGTTTAACTTAGT
TGTCAGAGTTCCCGGGGTGCAAGCTTTAGAGCTTTGTGTTTATGACTGGGAGCAGGTTGG
GAAACATGACAAGATGGGAATGAACGTCGTGCCTTTGAAAGAACTTCCTCCGGATGAGCC
AAAGATGATGACTCTTGACCTCCTTAAGAGCCTGGATCCAAACGATTCTCAAAATGACAA
AGGCCGTGGACAGCTTGAGGTGGAATTGACATACAAACCTTTCAAGGAGGAGGACATGGT
GAAGGAGAGTGATGATTTAGGTACACTGGAGAAGGCTCCTGAAGGAACACCACCTGGTGG
AGGTCTGCTTGTGGTCATAGTCCATGAAGCACAAGATTTGGAAGGAAAGCACCATACTAA
TCCACTTGTCCGGATTCTTTTCAGAGGGGAGGAGAGAAAAACTAAGCCAATAAAGAAGAG
CAGAGATCCAAGATGGCAAGAGGAGTTCCAGTTTATGCTGGAGGAACCTCCCATTAACGA
TAAACTGCATGTGGAAGTCATCAGTACCTCCAAGAGGATCGGCCTGCTGCATCCTAAGGA
ATCTCTGGGGTACATAGTTGTCAATCTTGCTGATGTCGTGACCAACAAACGGATCAACGA
GAAGTACCACCTGATAGACTCAAAGAATGGGCAGATTCAGATTGAGCTGCAGTGGAGAAC
TAGTTCCTGACCT