Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02290.t01
CDS Infomation

cds chromosome:12X:3:1565250:1567734:-1 gene:VIT_03s0038g02290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTACCAAGAAGTCGAACTCTTCCAAGCAGGATTTACAATGGAGTTGTGGAAGAGCGG
CAAGACATCAGGCACTACTTGCAGGTGGAAGTCCAGCCTAAACCCCATGGAGAGAGTGAA
GCAATAAACCCTCAGGCCAACTATTCCAAGTGTTTTGATGATGATGGCCGCCTCAAAAGA
ACAGGAACTTTCTGGACCGCTTCATCCCATATTATCACTGCTGTCATAGGCTCAGGGGTT
CTTTCACTGGCATGGGCAATAGGGCAGCTTGGTTGGGTTGCAGGGCCTATTGTAATGATC
CTTTTCGCCTTTGTCAATCTATACTCTTCCAACCTCCTGGCCCAGTGTTACAGGTCAGGT
GACCCTCTCACAGGACAAAGAAATTACACTTACATGGAAGCTGTCAAGGCTAACTTAGGA
GGGAAGAAGGTCCTGGCATGTGGGTGGATTCAGTACTTGAACTTATTTGGCACTGCAATT
GGGTACACAATTGCAGCATCAGTCAGCATGATGGCGATAAAGAGATCAAACTGTTTCCAC
AAAAGTGGGGGGAAAGATCCTTGTCACATGTCCAGCAATGGATACATGATCACCTTTGGA
ATCATAGAGATCATATTTTCTCAAATCCCAGACTTTGATCAAGTTTGGTGGCTCTCCATA
GTTGCTGCTATTATGTCTTTCACGTACTCTAGTGTTGGTCTAGGCCTTGGCGTCGCCAAA
GTTGCAGAAAATGGGAGCTTCAAAGGAAGCTTGACAGGCATAAGCATAGGGACAGTAACT
CATGCAGGAGTAGTGACTTCAACACAGAAGTTGTGGAGGAGTTTGCAGGCACTTGGAGCT
ATTGCCTTTGCTTATTCTTTCTCACTCATTCTCATCGAAATTCAGGATACAATAAAATCT
CCTCCTGCAGAGTACAAAACCATGAGGAAGGCAACGGTGCTGAGCATCGCTGTGACAACA
GCATTCTATATGCTGTGTGGATGCTTTGGCTATGCTGCCTTTGGAGATCTAGCTCCGGGA
AATCTTCTCACTGGCTTTGGATTCTATGACCCCTACTGGCTGTTAGACATAGCCAATATT
GCAATCATCGTTCATCTTGTCGGGGCATATCAGGTCTATTGCCAGCCCTTATTCGCATTT
GTGGAAAAATGGAGTGCACATAAGTGGCCGAAGAGCGACTTTGTGACTGAAGAATACGAC
TTGCCAATCCCTTGCTATGGGGTGTACCAGCTCAACTTCTTCCGTTTAGTATGGAGGACA
ATTTTTGTTGTGTTGACAACCCTTATAGCTATGCTCTTGCCCTTCTTCAATGATGTTGTG
GGCATACTTGGAGCATTTGGGTTCTGGCCCTTGACAGTTTATTTCCCAGTTGAGATGTAT
ATTTCCCAGAAGAAGATTGGACGGTGGACAAGCCGGTGGGTTGCCCTGCAGATACTAAGC
TTTGCTTGTCTGCTTATTTCTCTAGCTGCGGCAGTTGGGTCTGTGGCTGGAGTTGTCCTA
GATCTCAAGACTTACAAGCCATTCAAAACTAGTTATTAA

Peptide Sequence

PEP ID

VIT_03s0038g02290.t01
PEP Infomation

pep chromosome:12X:3:1565250:1567734:-1 gene:VIT_03s0038g02290 transcript:VIT_03s0038g02290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLPRSRTLPSRIYNGVVEERQDIRHYLQVEVQPKPHGESEAINPQANYSKCFDDDGRLKR
TGTFWTASSHIITAVIGSGVLSLAWAIGQLGWVAGPIVMILFAFVNLYSSNLLAQCYRSG
DPLTGQRNYTYMEAVKANLGGKKVLACGWIQYLNLFGTAIGYTIAASVSMMAIKRSNCFH
KSGGKDPCHMSSNGYMITFGIIEIIFSQIPDFDQVWWLSIVAAIMSFTYSSVGLGLGVAK
VAENGSFKGSLTGISIGTVTHAGVVTSTQKLWRSLQALGAIAFAYSFSLILIEIQDTIKS
PPAEYKTMRKATVLSIAVTTAFYMLCGCFGYAAFGDLAPGNLLTGFGFYDPYWLLDIANI
AIIVHLVGAYQVYCQPLFAFVEKWSAHKWPKSDFVTEEYDLPIPCYGVYQLNFFRLVWRT
IFVVLTTLIAMLLPFFNDVVGILGAFGFWPLTVYFPVEMYISQKKIGRWTSRWVALQILS
FACLLISLAAAVGSVAGVVLDLKTYKPFKTSY

Transcript Sequence

Transcript ID

VIT_03s0038g02290.t01
Transcript Infomation

cdna chromosome:12X:3:1565250:1567734:-1 gene:VIT_03s0038g02290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTCACAACCATGTTACCAAGAAGTCGAACTCTTCCAAGCAGGATTTACAATGGAGTTGT
GGAAGAGCGGCAAGACATCAGGCACTACTTGCAGGTGGAAGTCCAGCCTAAACCCCATGG
AGAGAGTGAAGCAATAAACCCTCAGGCCAACTATTCCAAGTGTTTTGATGATGATGGCCG
CCTCAAAAGAACAGGAACTTTCTGGACCGCTTCATCCCATATTATCACTGCTGTCATAGG
CTCAGGGGTTCTTTCACTGGCATGGGCAATAGGGCAGCTTGGTTGGGTTGCAGGGCCTAT
TGTAATGATCCTTTTCGCCTTTGTCAATCTATACTCTTCCAACCTCCTGGCCCAGTGTTA
CAGGTCAGGTGACCCTCTCACAGGACAAAGAAATTACACTTACATGGAAGCTGTCAAGGC
TAACTTAGGAGGGAAGAAGGTCCTGGCATGTGGGTGGATTCAGTACTTGAACTTATTTGG
CACTGCAATTGGGTACACAATTGCAGCATCAGTCAGCATGATGGCGATAAAGAGATCAAA
CTGTTTCCACAAAAGTGGGGGGAAAGATCCTTGTCACATGTCCAGCAATGGATACATGAT
CACCTTTGGAATCATAGAGATCATATTTTCTCAAATCCCAGACTTTGATCAAGTTTGGTG
GCTCTCCATAGTTGCTGCTATTATGTCTTTCACGTACTCTAGTGTTGGTCTAGGCCTTGG
CGTCGCCAAAGTTGCAGAAAATGGGAGCTTCAAAGGAAGCTTGACAGGCATAAGCATAGG
GACAGTAACTCATGCAGGAGTAGTGACTTCAACACAGAAGTTGTGGAGGAGTTTGCAGGC
ACTTGGAGCTATTGCCTTTGCTTATTCTTTCTCACTCATTCTCATCGAAATTCAGGATAC
AATAAAATCTCCTCCTGCAGAGTACAAAACCATGAGGAAGGCAACGGTGCTGAGCATCGC
TGTGACAACAGCATTCTATATGCTGTGTGGATGCTTTGGCTATGCTGCCTTTGGAGATCT
AGCTCCGGGAAATCTTCTCACTGGCTTTGGATTCTATGACCCCTACTGGCTGTTAGACAT
AGCCAATATTGCAATCATCGTTCATCTTGTCGGGGCATATCAGGTCTATTGCCAGCCCTT
ATTCGCATTTGTGGAAAAATGGAGTGCACATAAGTGGCCGAAGAGCGACTTTGTGACTGA
AGAATACGACTTGCCAATCCCTTGCTATGGGGTGTACCAGCTCAACTTCTTCCGTTTAGT
ATGGAGGACAATTTTTGTTGTGTTGACAACCCTTATAGCTATGCTCTTGCCCTTCTTCAA
TGATGTTGTGGGCATACTTGGAGCATTTGGGTTCTGGCCCTTGACAGTTTATTTCCCAGT
TGAGATGTATATTTCCCAGAAGAAGATTGGACGGTGGACAAGCCGGTGGGTTGCCCTGCA
GATACTAAGCTTTGCTTGTCTGCTTATTTCTCTAGCTGCGGCAGTTGGGTCTGTGGCTGG
AGTTGTCCTAGATCTCAAGACTTACAAGCCATTCAAAACTAGTTATTAAG