Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02280.t01
CDS Infomation

cds chromosome:12X:3:1560125:1564783:1 gene:VIT_03s0038g02280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTCGAATCCTTATAGAAACCCTAATTCTCTCTACCCGGAAGTTGATCTCTCAAAC
CCAGAAGCCACTTCTCCTCTTATCTCAAACCCAACTTCTGCTTCATCTTCGTCGCTGTAC
CCTTCTCTTGAAGTGAAAGAGCTCGCTGAGAATCTTTTCCCGGACGAAAACGATGCCGTT
TTACAAAACCCCAGTTCCCAACCATTCGAAGAAGTCCTCGTCAGAGTCTCCGGCGCCATC
GTCCATCTCATCGACAAGCAACACAGCGTCGAGCTCGCTTCCGGAGTGCTTACCATAGTT
CGGCTCCGGCAAGGCGAGAACGTGGTCGCTGTTCTTGCACGAATCGGCGATGAGATCCAG
TGGCCATTGGCGAAAGATGAGGCAGCGGTGAAGCTCGATGAATCGCATTATTTCTTCAGT
CTTCGCGTGCCCGAATCTGGGTCCGGCTCGGCTTCGAGCGATGATGATGGTGAGAGTGAG
AATTTGTTGAACTATGGATTAACTATCGCGTCGAAGGGGCAAGAGGGATTGTTGAAGGAA
TTGGATGCGGTTTTGGAGAAGTACAGTTGTTTTTCGGTGCAGAAGGTGAAGGGGACGGTT
GGGTGGGAGGTTTTAGATGGATCGGTTGCGAGAGAGACTTCTCCGGAGGATTTGGGATCG
AAGAAGAAGAAGGAATTGATGGAGGAGAGGTCGGGGGCGTACTGGACGACACTGGCTCCT
AATGTGGAGGATTACAGTGGGTGCGTTGCGAGGATGATTGCCGCCGGATCAGGGCAGCTC
ATCAAGGGAATCCTGTGGTCGGGCAATGTAACGGTGGATGGATTGAATTGGGGGAATGAG
TTTCTGAAGAAAAGAATGGGGCCGGGTTCCAAATCCGAAATTAGTCCAGAGGCAATGAAG
AGGATGAAAAGGGTTAAGAAGCTGACAAAGATGTCCGAGAAGGTGGCAACTGGAGTTCTT
TCTGGGGTTGTTAAAGTCTCTGGATTCTTTACAAGTTCTATTGTGAACTCAAAAGTGGGC
AAGAAATTTTTTAGCCTGTTGCCTGGAGAAATTGTCCTTGCTTCATTAGATGGATTTAAT
AAAGTCTGTGATGCTGTTGAAGTTGCTGGAAAGAACGTCATGTCTACCACCTCAGTTGTG
ACAACTGGGCTTGTTTCACAGAGGTATGGAGAACAGGCAGCACATGTGACACACGAGGGG
CTTGGTGCTGCAGGGCATGCTATTGGGACTGCTTGGGCAGTGTTCAAGATACGAAAAGCT
CTCAACCCGAAGAGCGCATTTAAGCCCACAAAACTTGCAAAAGCTGCTGCTGAAGCAAAT
TCTGCTAAACTGAAGACTAAACAAGCAAAGTAA

Peptide Sequence

PEP ID

VIT_03s0038g02280.t01
PEP Infomation

pep chromosome:12X:3:1560125:1564783:1 gene:VIT_03s0038g02280 transcript:VIT_03s0038g02280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSNPYRNPNSLYPEVDLSNPEATSPLISNPTSASSSSLYPSLEVKELAENLFPDENDAV
LQNPSSQPFEEVLVRVSGAIVHLIDKQHSVELASGVLTIVRLRQGENVVAVLARIGDEIQ
WPLAKDEAAVKLDESHYFFSLRVPESGSGSASSDDDGESENLLNYGLTIASKGQEGLLKE
LDAVLEKYSCFSVQKVKGTVGWEVLDGSVARETSPEDLGSKKKKELMEERSGAYWTTLAP
NVEDYSGCVARMIAAGSGQLIKGILWSGNVTVDGLNWGNEFLKKRMGPGSKSEISPEAMK
RMKRVKKLTKMSEKVATGVLSGVVKVSGFFTSSIVNSKVGKKFFSLLPGEIVLASLDGFN
KVCDAVEVAGKNVMSTTSVVTTGLVSQRYGEQAAHVTHEGLGAAGHAIGTAWAVFKIRKA
LNPKSAFKPTKLAKAAAEANSAKLKTKQAK

Transcript Sequence

Transcript ID

VIT_03s0038g02280.t01
Transcript Infomation

cdna chromosome:12X:3:1560125:1564783:1 gene:VIT_03s0038g02280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTAAAACCCCAAACTTGCCCTTTTTATTTTCTTGGAATCCGAACTCCATTGCCACATGAA
ATATGTCTTCGAATCCTTATAGAAACCCTAATTCTCTCTACCCGGAAGTTGATCTCTCAA
ACCCAGAAGCCACTTCTCCTCTTATCTCAAACCCAACTTCTGCTTCATCTTCGTCGCTGT
ACCCTTCTCTTGAAGTGAAAGAGCTCGCTGAGAATCTTTTCCCGGACGAAAACGATGCCG
TTTTACAAAACCCCAGTTCCCAACCATTCGAAGAAGTCCTCGTCAGAGTCTCCGGCGCCA
TCGTCCATCTCATCGACAAGCAACACAGCGTCGAGCTCGCTTCCGGAGTGCTTACCATAG
TTCGGCTCCGGCAAGGCGAGAACGTGGTCGCTGTTCTTGCACGAATCGGCGATGAGATCC
AGTGGCCATTGGCGAAAGATGAGGCAGCGGTGAAGCTCGATGAATCGCATTATTTCTTCA
GTCTTCGCGTGCCCGAATCTGGGTCCGGCTCGGCTTCGAGCGATGATGATGGTGAGAGTG
AGAATTTGTTGAACTATGGATTAACTATCGCGTCGAAGGGGCAAGAGGGATTGTTGAAGG
AATTGGATGCGGTTTTGGAGAAGTACAGTTGTTTTTCGGTGCAGAAGGTGAAGGGGACGG
TTGGGTGGGAGGTTTTAGATGGATCGGTTGCGAGAGAGACTTCTCCGGAGGATTTGGGAT
CGAAGAAGAAGAAGGAATTGATGGAGGAGAGGTCGGGGGCGTACTGGACGACACTGGCTC
CTAATGTGGAGGATTACAGTGGGTGCGTTGCGAGGATGATTGCCGCCGGATCAGGGCAGC
TCATCAAGGGAATCCTGTGGTCGGGCAATGTAACGGTGGATGGATTGAATTGGGGGAATG
AGTTTCTGAAGAAAAGAATGGGGCCGGGTTCCAAATCCGAAATTAGTCCAGAGGCAATGA
AGAGGATGAAAAGGGTTAAGAAGCTGACAAAGATGTCCGAGAAGGTGGCAACTGGAGTTC
TTTCTGGGGTTGTTAAAGTCTCTGGATTCTTTACAAGTTCTATTGTGAACTCAAAAGTGG
GCAAGAAATTTTTTAGCCTGTTGCCTGGAGAAATTGTCCTTGCTTCATTAGATGGATTTA
ATAAAGTCTGTGATGCTGTTGAAGTTGCTGGAAAGAACGTCATGTCTACCACCTCAGTTG
TGACAACTGGGCTTGTTTCACAGAGGTATGGAGAACAGGCAGCACATGTGACACACGAGG
GGCTTGGTGCTGCAGGGCATGCTATTGGGACTGCTTGGGCAGTGTTCAAGATACGAAAAG
CTCTCAACCCGAAGAGCGCATTTAAGCCCACAAAACTTGCAAAAGCTGCTGCTGAAGCAA
ATTCTGCTAAACTGAAGACTAAACAAGCAAAGTAATGGCAGATGGTTTTGGGTTGGTTTT
ATATGAAACTCTTAGACACTTCCATTTTTTGTTCTTATACCAAGTGGTATCTACTACAGA
CAGTCGAATGTATTTATTTATTTTTGTTTCAATGGATGTTCTCAGAAAACCAGTGTGTGT
TTCAACAATCTTCTTGTATAAA