Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02210.t01
CDS Infomation

cds chromosome:12X:3:1519055:1524015:1 gene:VIT_03s0038g02210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTAGCTCTGAAGAACCCGACAGGACTAGTCTCCTCCATGACTCTTCATCTCCGACT
CACCCTCTCCTCTCCAAATCCTACCCTTCACCCTCAATTTCAGAACCTCAGCCTGAATCC
TCCGAACCTGACCAGACCCAGTTCCTCCAGATCTCCTACAATTACGGGCCTAGACCCTTC
AAGGACCTCCCCTTTCTCATCCTCTTTCTGGTCGTCGTTCTCTGCACTTTCGGCTTTGGC
ATCTTCGCAGTTGTGAATCGGAACCCCAATTCTTCCAGCGTTTCTTCTTATTCTTATGAC
TCCAGTTCCACTTCTTGTGTCAAGAACTCCACTGCCTCGCTGAAGCAACAACCCATTTCG
GATTACTTGAAACTTTCGTCGAGTTCGCATTTCTTGAAGGATTTGATATGGACCCTTGTA
GTTACTTTGATTTTGAGCATACCCTTTTCTTGGCTTCTTCTTTTGTCGCTCAAGAATTAC
ACCAAACAAGTGGTCTACGCCTCGCTTCCCTTCTTTGTTGTGATGCCCATTTTCTTTGAT
GTGTATTGGTTTGTGGCTTGTACTGTTAGCTCGAGTTGCAGCGAGGCGTTTCCTTTGGTG
TATAGGATTTTGTTGCTTGTGTTTGTGTTTTTGTTTATTGGGGTGATCGTGTGGATAATT
GTGGCCAACTGGCATAGAATTGAATTGACTGTGGATATAATTGGGATTGCCTCCCATTCG
CTATCGAGGAATTTGGGGCTGTTTGTGGTTCTTCCATGTTTGACTTTCAGTTTGGTGATT
TACTATGCTCCGATAGTTGTGTTTTTGGTGTTTGCGAGGTTGAATGGGAAGATTGTGCCG
CGGGAATCCAGTGGAGAGTATTATTGTGTTTGGAAGCAGGATAGTTGGGTGCCTGCATAT
TATACATTGGCAATTCTAACAATGTTGTGGTCTGCAACAGCTATGGTGGAGCTGCAGGTT
TATGTGATTAGTGGGACTATTGCACAGTGGTACTTTGCAAAGGATCACGATTCCACCCCA
AAGAGGAGTATAAGAAGTTCTTTGAGGAATGCCTTGGGTCCCTCTTCTGGCACAGTATGT
CTATCTGGATTACTTATTTGTGCTGTTCATGTGGTGCGTGCTGCTGTTGATAGTGCAAGA
CAAGAAGAACTTCAGGGAATAGTGAACCTTATGCTCCGATGCTGCGTTAATGCCTTGCTG
ACAGCTATTGATTTTCTTAACAAGTTCACCATCAATTTTGCAGCAATAACTGGTGAAGCT
TACTGTACATCTGCAAGGATGACATATGAGCTTCTAAAGCGTAATCTACTTTCTGCTGTT
TTTGTGGAGACTGTCTCCTCTCGAATATTAGGTGGCATTGTTTTTGTGTTCTCAGCAATA
TATGCAATTGTGGCTTGTGCTATCTTAAAGGCTGTAAGCAATCTTGGAGCTGATGCATAC
TTTGTGGCCGCTCTGGCATGGGTACTGCTGATCTTGGTGCTGGGTTTCTTTGTTCATGTG
CTCGACAATGTGATTGACACAGTTTATGTGTGCTATGCCATAGATAGGGACAGGGGGGAG
GTTTGTAAACAGGAGGTTCATGAAGTTTATGTTAACCTACCCATCCGAAGGAACCATAGA
TCATCTCTTGCCAACAGAACAGTAGGTGTATAG

Peptide Sequence

PEP ID

VIT_03s0038g02210.t01
PEP Infomation

pep chromosome:12X:3:1519055:1524015:1 gene:VIT_03s0038g02210 transcript:VIT_03s0038g02210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSSEEPDRTSLLHDSSSPTHPLLSKSYPSPSISEPQPESSEPDQTQFLQISYNYGPRPF
KDLPFLILFLVVVLCTFGFGIFAVVNRNPNSSSVSSYSYDSSSTSCVKNSTASLKQQPIS
DYLKLSSSSHFLKDLIWTLVVTLILSIPFSWLLLLSLKNYTKQVVYASLPFFVVMPIFFD
VYWFVACTVSSSCSEAFPLVYRILLLVFVFLFIGVIVWIIVANWHRIELTVDIIGIASHS
LSRNLGLFVVLPCLTFSLVIYYAPIVVFLVFARLNGKIVPRESSGEYYCVWKQDSWVPAY
YTLAILTMLWSATAMVELQVYVISGTIAQWYFAKDHDSTPKRSIRSSLRNALGPSSGTVC
LSGLLICAVHVVRAAVDSARQEELQGIVNLMLRCCVNALLTAIDFLNKFTINFAAITGEA
YCTSARMTYELLKRNLLSAVFVETVSSRILGGIVFVFSAIYAIVACAILKAVSNLGADAY
FVAALAWVLLILVLGFFVHVLDNVIDTVYVCYAIDRDRGEVCKQEVHEVYVNLPIRRNHR
SSLANRTVGV

Transcript Sequence

Transcript ID

VIT_03s0038g02210.t01
Transcript Infomation

cdna chromosome:12X:3:1519055:1524015:1 gene:VIT_03s0038g02210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATCTCCGCCACTGCGGCCCCAGAATCCCCTTTTGTTTCTTCTCTAAACCCACCTTTTT
CTCCCCTCGCTCTTCCTTTCTCTCTCTAGGATGGGTAGCTCTGAAGAACCCGACAGGACT
AGTCTCCTCCATGACTCTTCATCTCCGACTCACCCTCTCCTCTCCAAATCCTACCCTTCA
CCCTCAATTTCAGAACCTCAGCCTGAATCCTCCGAACCTGACCAGACCCAGTTCCTCCAG
ATCTCCTACAATTACGGGCCTAGACCCTTCAAGGACCTCCCCTTTCTCATCCTCTTTCTG
GTCGTCGTTCTCTGCACTTTCGGCTTTGGCATCTTCGCAGTTGTGAATCGGAACCCCAAT
TCTTCCAGCGTTTCTTCTTATTCTTATGACTCCAGTTCCACTTCTTGTGTCAAGAACTCC
ACTGCCTCGCTGAAGCAACAACCCATTTCGGATTACTTGAAACTTTCGTCGAGTTCGCAT
TTCTTGAAGGATTTGATATGGACCCTTGTAGTTACTTTGATTTTGAGCATACCCTTTTCT
TGGCTTCTTCTTTTGTCGCTCAAGAATTACACCAAACAAGTGGTCTACGCCTCGCTTCCC
TTCTTTGTTGTGATGCCCATTTTCTTTGATGTGTATTGGTTTGTGGCTTGTACTGTTAGC
TCGAGTTGCAGCGAGGCGTTTCCTTTGGTGTATAGGATTTTGTTGCTTGTGTTTGTGTTT
TTGTTTATTGGGGTGATCGTGTGGATAATTGTGGCCAACTGGCATAGAATTGAATTGACT
GTGGATATAATTGGGATTGCCTCCCATTCGCTATCGAGGAATTTGGGGCTGTTTGTGGTT
CTTCCATGTTTGACTTTCAGTTTGGTGATTTACTATGCTCCGATAGTTGTGTTTTTGGTG
TTTGCGAGGTTGAATGGGAAGATTGTGCCGCGGGAATCCAGTGGAGAGTATTATTGTGTT
TGGAAGCAGGATAGTTGGGTGCCTGCATATTATACATTGGCAATTCTAACAATGTTGTGG
TCTGCAACAGCTATGGTGGAGCTGCAGGTTTATGTGATTAGTGGGACTATTGCACAGTGG
TACTTTGCAAAGGATCACGATTCCACCCCAAAGAGGAGTATAAGAAGTTCTTTGAGGAAT
GCCTTGGGTCCCTCTTCTGGCACAGTATGTCTATCTGGATTACTTATTTGTGCTGTTCAT
GTGGTGCGTGCTGCTGTTGATAGTGCAAGACAAGAAGAACTTCAGGGAATAGTGAACCTT
ATGCTCCGATGCTGCGTTAATGCCTTGCTGACAGCTATTGATTTTCTTAACAAGTTCACC
ATCAATTTTGCAGCAATAACTGGTGAAGCTTACTGTACATCTGCAAGGATGACATATGAG
CTTCTAAAGCGTAATCTACTTTCTGCTGTTTTTGTGGAGACTGTCTCCTCTCGAATATTA
GGTGGCATTGTTTTTGTGTTCTCAGCAATATATGCAATTGTGGCTTGTGCTATCTTAAAG
GCTGTAAGCAATCTTGGAGCTGATGCATACTTTGTGGCCGCTCTGGCATGGGTACTGCTG
ATCTTGGTGCTGGGTTTCTTTGTTCATGTGCTCGACAATGTGATTGACACAGTTTATGTG
TGCTATGCCATAGATAGGGACAGGGGGGAGGTTTGTAAACAGGAGGTTCATGAAGTTTAT
GTTAACCTACCCATCCGAAGGAACCATAGATCATCTCTTGCCAACAGAACAGTAGGTGTA
TAGTTGACCATGAATTCAACTTGCGTGTTGGGGTTTTGCCTCTCACTTGTTGTCTGTATG
AAGTTAAAACTGCATCTCGATGAGTTGTGCATACCTTCGAATGTTGCATTGTACAATTTC
TAGGTTGGTTCAATAAAGAGGTAGTCCAGACAGCTTATTGGATCAATTCAGTTTGTTCTT
CTGTTGTGCAAGACAAATCACGTGAAGCACAAACAAACCCATTGGTGCTTGTCACCTATG
GAGGTGATCGGCTGGGGACTGATATTTTGGCCGAGTTGGTGAACCATGAGAAATGTGTTT
CTGCTACTCTTTTTTCTTTTGGCCTGCACACATTTGGATCAGGTGTCATCAGCCATGAAT
TCTGTTTCAGTCTTGCAGGTGTATCCTTTTCTATTAATGAAGGTGTCACTTCTACTTATT
GGGGAAATTTTCTTGTCTTTTCAGTTTTTATTGATGATACTGAATACTCAAGATCAATAT
GTTAAAATCCGACAGTTGTATTCATTTCGGTACAGGTACCTCATCAATGCTTAGATGGTG
TTATTTAATACATTCCCATCCTGTTCCTGTTCATAAA