Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02190.t01
CDS Infomation

cds chromosome:12X:3:1502133:1506299:-1 gene:VIT_03s0038g02190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCTTCCACCTATCTCCAGCGTCCTCCTCCAGAAAATGGCTGGGGTTTGTGACGGCC
GTTTGGGTTCAGTCCATCTCCGGCAACAACTACACTTTTTCCAACTACTCAGATGCTCTC
AAATCGTTAATGGCTCTCACCCAGTTGCAACTCAACAACCTCTCTGTTGCCAAGGATGTG
GGCAAGGCGTTTGGCCTCCTCTCCGGTCTCGCCTCCGACCGGTTGTCCACTCCGATGATG
CTTCTTATTGGGTCGATTGAAGGGCTTGTCGGGTATGGGGTTCAATGGCTGGTCGTCAGC
CGGAAAATCCAGCCGCTTCCCTATTGGCAGATGTGTATATTTCTATGCATGGGAGGCAAC
AGTACGACATGGATGAACACGGCGGTTCTGGTGACATGCATCCGAAACTTCCGGACGAAT
CGAGGTCCGGTCTCCGGAATATTGAAGGGTTACGTGGGTCTGAGCACCGCCATTTTCACT
GACCTCTGCACTGCTCTCTTTGCCGACGACCCCGCCATCTTCCTCCTCATGCTCGCCATC
ATCCCCCTTCTTGTCTGCCTCTCCGCTATTCTCTTCCTCCGCGAGGTCCCTTCGTCGTCC
ACCGCAGCCGGCGAGAAGGAAGAGACCAAATTCTTCAACCTCTTCAACATCGTCGCCGTC
GTCCTCGCCGTCTATCTCCTCACCTTCGACGTCACCGGCTCCCATAGCCGCATCCTCTCT
CAGGCATTCGCCGTCGTCCTGCTCTTCCTCCTGGCTTGCCCTCTCTCAATCCCTCTCTAT
TTCATGCTACAGGATTTTAACCGGTCCGGTTCAAAACCCAGTTCCGACATCGAGGGTCTA
ATCACCGAAACCCTCCTGAGTCAAAACAGTCAGCCGGAAATGGCGGCTCCGGCATCGGAG
GAAAAGGTGGAGCCTGTGGTGGAAATCAAACGACCCCGGCCGTCAATTGGGGAGGATCAC
ACAATTATTGAAGCAATCAGCACCACTGATTTCTGGATACTCTTTGCATCCTTCCTCTGT
GGAGTTGGCACTGGTTTGGCTGTTATGAATAACATGGGACAAATGGGTCTAGCTCTCGGC
TACGTGGATGTCTCCATTTTCGTCTCCCTCACAAGCATTTGGGGATTTTTCGGCCGAATT
TTATCCGGTTCAGTTTCAGAATACTTCATAGGAAAAGCTGGAACACCAAGACCTTTCTGG
AATGCAGCTTCTCAGATTCTGATGGCAGTTGGGTATGTTGTGATGGCCATGGCTTTGCCT
GGCTCACTATACATTGGTTCAGTCGTGGTAGGGATTTGCTATGGAGTTCGTCTCGCTGTC
ACAGTCCCCATTGCTTCTGAACTGTTTGGCCTGAAATATTATGGTCTCATCTACAACATT
CTAATCCTCAACCTCCCCCTTGGCTCCTTCCTCTTCTCCGGCCTGCTTGCTGGCTTGTTG
TATGACGCCCATGCTACCCGCACAGCAGGAGGTGGCACCACATGCATAGGCCCCCACTGT
TACAGGCTGGTGTTCGTGGTAATGGCCTTATCATGCATTATCGGGTTTGGCTTAGACGTC
CTACTGGCAATTAGAACAAAGAATGTTTACTCCAAGATTCGCGCGAGCAAGAGATCAAAG
AAGCCAGCGGCCCCATCCAACAGCCGATAA

Peptide Sequence

PEP ID

VIT_03s0038g02190.t01
PEP Infomation

pep chromosome:12X:3:1502133:1506299:-1 gene:VIT_03s0038g02190 transcript:VIT_03s0038g02190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGFHLSPASSSRKWLGFVTAVWVQSISGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDV
GKAFGLLSGLASDRLSTPMMLLIGSIEGLVGYGVQWLVVSRKIQPLPYWQMCIFLCMGGN
STTWMNTAVLVTCIRNFRTNRGPVSGILKGYVGLSTAIFTDLCTALFADDPAIFLLMLAI
IPLLVCLSAILFLREVPSSSTAAGEKEETKFFNLFNIVAVVLAVYLLTFDVTGSHSRILS
QAFAVVLLFLLACPLSIPLYFMLQDFNRSGSKPSSDIEGLITETLLSQNSQPEMAAPASE
EKVEPVVEIKRPRPSIGEDHTIIEAISTTDFWILFASFLCGVGTGLAVMNNMGQMGLALG
YVDVSIFVSLTSIWGFFGRILSGSVSEYFIGKAGTPRPFWNAASQILMAVGYVVMAMALP
GSLYIGSVVVGICYGVRLAVTVPIASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGLL
YDAHATRTAGGGTTCIGPHCYRLVFVVMALSCIIGFGLDVLLAIRTKNVYSKIRASKRSK
KPAAPSNSR

Transcript Sequence

Transcript ID

VIT_03s0038g02190.t01
Transcript Infomation

cdna chromosome:12X:3:1502133:1506299:-1 gene:VIT_03s0038g02190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTAGATTGTAGGAATCCGCAACAATGGGCTTCCACCTATCTCCAGCGTCCTCCTCCAGA
AAATGGCTGGGGTTTGTGACGGCCGTTTGGGTTCAGTCCATCTCCGGCAACAACTACACT
TTTTCCAACTACTCAGATGCTCTCAAATCGTTAATGGCTCTCACCCAGTTGCAACTCAAC
AACCTCTCTGTTGCCAAGGATGTGGGCAAGGCGTTTGGCCTCCTCTCCGGTCTCGCCTCC
GACCGGTTGTCCACTCCGATGATGCTTCTTATTGGGTCGATTGAAGGGCTTGTCGGGTAT
GGGGTTCAATGGCTGGTCGTCAGCCGGAAAATCCAGCCGCTTCCCTATTGGCAGATGTGT
ATATTTCTATGCATGGGAGGCAACAGTACGACATGGATGAACACGGCGGTTCTGGTGACA
TGCATCCGAAACTTCCGGACGAATCGAGGTCCGGTCTCCGGAATATTGAAGGGTTACGTG
GGTCTGAGCACCGCCATTTTCACTGACCTCTGCACTGCTCTCTTTGCCGACGACCCCGCC
ATCTTCCTCCTCATGCTCGCCATCATCCCCCTTCTTGTCTGCCTCTCCGCTATTCTCTTC
CTCCGCGAGGTCCCTTCGTCGTCCACCGCAGCCGGCGAGAAGGAAGAGACCAAATTCTTC
AACCTCTTCAACATCGTCGCCGTCGTCCTCGCCGTCTATCTCCTCACCTTCGACGTCACC
GGCTCCCATAGCCGCATCCTCTCTCAGGCATTCGCCGTCGTCCTGCTCTTCCTCCTGGCT
TGCCCTCTCTCAATCCCTCTCTATTTCATGCTACAGGATTTTAACCGGTCCGGTTCAAAA
CCCAGTTCCGACATCGAGGGTCTAATCACCGAAACCCTCCTGAGTCAAAACAGTCAGCCG
GAAATGGCGGCTCCGGCATCGGAGGAAAAGGTGGAGCCTGTGGTGGAAATCAAACGACCC
CGGCCGTCAATTGGGGAGGATCACACAATTATTGAAGCAATCAGCACCACTGATTTCTGG
ATACTCTTTGCATCCTTCCTCTGTGGAGTTGGCACTGGTTTGGCTGTTATGAATAACATG
GGACAAATGGGTCTAGCTCTCGGCTACGTGGATGTCTCCATTTTCGTCTCCCTCACAAGC
ATTTGGGGATTTTTCGGCCGAATTTTATCCGGTTCAGTTTCAGAATACTTCATAGGAAAA
GCTGGAACACCAAGACCTTTCTGGAATGCAGCTTCTCAGATTCTGATGGCAGTTGGGTAT
GTTGTGATGGCCATGGCTTTGCCTGGCTCACTATACATTGGTTCAGTCGTGGTAGGGATT
TGCTATGGAGTTCGTCTCGCTGTCACAGTCCCCATTGCTTCTGAACTGTTTGGCCTGAAA
TATTATGGTCTCATCTACAACATTCTAATCCTCAACCTCCCCCTTGGCTCCTTCCTCTTC
TCCGGCCTGCTTGCTGGCTTGTTGTATGACGCCCATGCTACCCGCACAGCAGGAGGTGGC
ACCACATGCATAGGCCCCCACTGTTACAGGCTGGTGTTCGTGGTAATGGCCTTATCATGC
ATTATCGGGTTTGGCTTAGACGTCCTACTGGCAATTAGAACAAAGAATGTTTACTCCAAG
ATTCGCGCGAGCAAGAGATCAAAGAAGCCAGCGGCCCCATCCAACAGCCGATAAATGCTC
ACAATCCCAAAGAGACGGGACGAGACCAGATGAGAAGAAACATAAGATTGACGGGCTTTT
GCCCAGTGATACTCTTATGTTGAACAACGATAGCTTGATGGGCATTTCTCAAGAGAAATG
TTCTAATCTGAAAAATAAATCATTCCCATATTATCAAAAAAGATCATATGGCCAGGTACT
TGTTCTAGATGCGCTGCCTTATGTAGGTTTTCTACATGATGTTGCTGAACATGCCATTTG
GTCATGAAGTACCATATGGTTTGATCTTCATTCTAGATTTGTACTATGGGGATTGATTGA
TTGTTTGTTGTATTTTTGGTC