Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02170.t01
CDS Infomation

cds chromosome:12X:3:1492918:1494778:1 gene:VIT_03s0038g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCGTCTCTCTTGCTGCTCTTCCATTTTCATCTTGAACATCTCACTCATGGCCTTT
TCCACTGGTGTTTTGGGTGCTACATTCACGTTTGTGAACAGGTGCGAGTACACTGTGTGG
CCGGGAATTCTCGCAAATGCCGGCAGTGCCAGGCTCGACAGCACTGGCTTCGAGCTACCA
AAGGACACTTCCCGTTCGTTTCTGGCTCCGACAGGTTGGTCCGGTAGGTTCTGGGGGCGA
ACAGGGTGCAACTTTGACGGATCTGGGTTGGGTTCTTGCGTCACTGGCGACTGTGGGTCG
GGGACCATCGAATGCAACGGCGCCGGTGCTGCCCCGCCGGCGACACTGGCGGAGTTCACT
CTCGGTACCGGCGGGCAGGACTTCTACGACGTGAGCCTCGTCGATGGCTACAACCTGCCG
ATGATAGTGGAAGGGAGTGGTGGGTCGGGAATGTGCGCGTCGACGGGCTGCACGGTGGAT
CTCAACCAGGGCTGTCCGGCGGAACTGAAGGTCGGAGACGGCAGCGCGTGCAGGAGCGCG
TGCGAAGCGTTTGGGAGCCCGGAGTACTGTTGCAGCGGCGCGTACAGTACGCCCGCCACC
TGCCGGCCGTCGGTGTACTCGGAGATGTTCAAGTCCGCTTGCCCCAGATCCTACAGCTAT
GCCTATGATGATGCCACCAGTACCTTCACATGTGCCGGCGCTGATTATACGGTGACGTTT
TGCCCCTCATCTCCAAGTCAGAAATCTTCAAGAGAGTCTTCACCAACGACCACAGGTACT
CCAACAGATGAGCCGGGAGTATCAGGGTCCGGAACCTATGAGCAAGGAGTATCAGGGTCC
GGAACCTATGAGCCAGGGGCATCAGGGTCCGGAACAATGGGATCAATGACAATCGGCTCA
GGGTCAGGCTCAGACTCTGGAGCAATGCTGGCAGATGGGTCATGGTTAGCTGGTTTAGCC
ATGGGAGACTCAGCCAGGGCTCACTCTCCATCATCATTCGCTGCCTCTTTAGCTCTCTCT
TTCCTCCTCTTCTCCTTTGTTTACTTGTAG

Peptide Sequence

PEP ID

VIT_03s0038g02170.t01
PEP Infomation

pep chromosome:12X:3:1492918:1494778:1 gene:VIT_03s0038g02170 transcript:VIT_03s0038g02170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRLSCCSSIFILNISLMAFSTGVLGATFTFVNRCEYTVWPGILANAGSARLDSTGFELP
KDTSRSFLAPTGWSGRFWGRTGCNFDGSGLGSCVTGDCGSGTIECNGAGAAPPATLAEFT
LGTGGQDFYDVSLVDGYNLPMIVEGSGGSGMCASTGCTVDLNQGCPAELKVGDGSACRSA
CEAFGSPEYCCSGAYSTPATCRPSVYSEMFKSACPRSYSYAYDDATSTFTCAGADYTVTF
CPSSPSQKSSRESSPTTTGTPTDEPGVSGSGTYEQGVSGSGTYEPGASGSGTMGSMTIGS
GSGSDSGAMLADGSWLAGLAMGDSARAHSPSSFAASLALSFLLFSFVYL

Transcript Sequence

Transcript ID

VIT_03s0038g02170.t01
Transcript Infomation

cdna chromosome:12X:3:1492918:1494778:1 gene:VIT_03s0038g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACATTATTAAATCTTCCATAGCATGGGTCTTGCAGTTTATTAATTTTTCTCCAACTCACT
CATAACTGATCTTCCTCTCTCTCTCCCTCTGTTCCTGTCAAGACAGCAGCTTTTCTGGGT
TCATGGGGGCTAAACGCTAGTCCCCGACAGTCTTCCCCAACACCCCATTCCTCTCTTTTG
CCACCTCTCACTTCCTAAACCCCTTCATTTTTACCGTCTAACTAGCTAAACCATCATGGG
TCGTCTCTCTTGCTGCTCTTCCATTTTCATCTTGAACATCTCACTCATGGCCTTTTCCAC
TGGTGTTTTGGGTGCTACATTCACGTTTGTGAACAGGTGCGAGTACACTGTGTGGCCGGG
AATTCTCGCAAATGCCGGCAGTGCCAGGCTCGACAGCACTGGCTTCGAGCTACCAAAGGA
CACTTCCCGTTCGTTTCTGGCTCCGACAGGTTGGTCCGGTAGGTTCTGGGGGCGAACAGG
GTGCAACTTTGACGGATCTGGGTTGGGTTCTTGCGTCACTGGCGACTGTGGGTCGGGGAC
CATCGAATGCAACGGCGCCGGTGCTGCCCCGCCGGCGACACTGGCGGAGTTCACTCTCGG
TACCGGCGGGCAGGACTTCTACGACGTGAGCCTCGTCGATGGCTACAACCTGCCGATGAT
AGTGGAAGGGAGTGGTGGGTCGGGAATGTGCGCGTCGACGGGCTGCACGGTGGATCTCAA
CCAGGGCTGTCCGGCGGAACTGAAGGTCGGAGACGGCAGCGCGTGCAGGAGCGCGTGCGA
AGCGTTTGGGAGCCCGGAGTACTGTTGCAGCGGCGCGTACAGTACGCCCGCCACCTGCCG
GCCGTCGGTGTACTCGGAGATGTTCAAGTCCGCTTGCCCCAGATCCTACAGCTATGCCTA
TGATGATGCCACCAGTACCTTCACATGTGCCGGCGCTGATTATACGGTGACGTTTTGCCC
CTCATCTCCAAGTCAGAAATCTTCAAGAGAGTCTTCACCAACGACCACAGGTACTCCAAC
AGATGAGCCGGGAGTATCAGGGTCCGGAACCTATGAGCAAGGAGTATCAGGGTCCGGAAC
CTATGAGCCAGGGGCATCAGGGTCCGGAACAATGGGATCAATGACAATCGGCTCAGGGTC
AGGCTCAGACTCTGGAGCAATGCTGGCAGATGGGTCATGGTTAGCTGGTTTAGCCATGGG
AGACTCAGCCAGGGCTCACTCTCCATCATCATTCGCTGCCTCTTTAGCTCTCTCTTTCCT
CCTCTTCTCCTTTGTTTACTTGTAGCCCATCGTTCTGTTAGCTTTCATGGTTTTGGGTTT
TCCATGTGAATTCAATTACATATTTTGCAGCCTTAATGGGCATTGTGGGGGGTTTTGCCT
TGTGTTTGGGAAAGAAGAAAGCTAACAAATTACTCCAGACTGTGAACCACCCACTTCAAG
ATTCCCCAGAAATATTCAATGTTAACGTACATACATTAAAAATATTGTCCAGTTTTCAAA
GTTCTGTCACTGTAGCCTTAAAGCAAGAAATGGGGATGTGGGGATTGGGGGGT