Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g02030.t01
CDS Infomation

cds chromosome:12X:3:1402181:1405517:1 gene:VIT_03s0038g02030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTCCAACAAAACAAACTCACCTCACGGAAGCTTGTTAGGTTCTACCTGGGTGAA
ATTCACAAACTCAACCCAATTCTTCGTGGGGTGATAGAGGTGAACCCAGATGCACTCCTC
CAAGCAGATAAGGCTGACAAAGAGAAGAAGGCTAAGTCACTTCGGTCGCTGGAGGGGCTG
CATGGCATTCCTATTCTGCTTAAGGATAATATTGCAACCAAGGACAAGATGAACACAACA
GCTGGGTCATTTGCACTGCTTAAATCGGTGGTGCCAAGGGATGCAGGCGTGGTGAGGAAG
TTGAGGAAGGCTGGGGCTATCATACTGGGAAAGGCTAGCCTGAGTGAGTGGACTGGTTTG
CGCTTTGTTTTTCCTTATGGCTGGTGTGCCAGAACTGGCCAAGGTCGGAACCCTTATGTT
CTGTCAGCAACTCCTTGTGGGTCAAGTAGTGGATCAGCTATATCAGTAGCAGCAAATTTA
GCAGCAGTTTCATTAGGGACGGAAACTATGGGATCCATCTTATGTCCATCCCATTTTAAT
TCAGTAGTGGGCATCAAACCAACAGTAGGTCTCACCAGCCGAGCTGGGGTGGTTCCAATC
TCTCCCAGGCAGGACACTGTTGGGCCCATCTGCAGGACAGTCTCCGACGCTGTAGAGGTA
CTGGATGTCATTGTAGGTTTTGACAAGAGGGATAAAGCAACCAGGACAGCATCCAAGTAC
ATACCAAGGGGTGGCTACAAGCAATTTCTCAATGCAAATGGGCTCAAGGGGAAGAGATTA
GGAATAGTGAGGAATCCTCCCTATATGTTTGAGAATGTCTCTGTCCAGCCTCAAGTTTTT
GAGCATCATTTCCACACACTAAGGCAAGGAGGTGCGGTTTTGGTAGACCACCTGAAAATA
GCAAACATCGATGTTTTCTTTGGCTCCACCGGAGTAGAAGCACTAGAGGCTGAGTTAAAA
ATATCCTTGAATGCTTACCTGAAAGAGCTGGTAGCATCCCCAGTAAGAACTTTGGCTGAT
GTGATAGCCTTCAACAACAAATTCTCACATTTAGAAAAGGTCAAGGAGTATGGACAAGAT
CTGTTTCTGCAAGCCCAAGCCACAAAAGGAATAAACAAGAAAACTTTGTTAAAATTAGCA
AGATTTTCAAGGAATGGATTCGAGAAGTTGATGAAGAAGCATAAGCTGGACGCAATGGTA
GCTCCTACTGCAGATATTATTCATGTTCTCGCCATTGGAGGATTCCCAGGAATTGATGTT
CCAGCTGGATATGATGGAAAAGGAGTACCATTTGGCATTTGTTTTGGGGGCCTAAAGGGC
TCTGAGCCAAAGCTGATCGAGATTGCATATAGCTTCGAGCAGGCAACTAAGATTAGGAAG
CCACCTTCATTTAAACCTTGA

Peptide Sequence

PEP ID

VIT_03s0038g02030.t01
PEP Infomation

pep chromosome:12X:3:1402181:1405517:1 gene:VIT_03s0038g02030 transcript:VIT_03s0038g02030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAFQQNKLTSRKLVRFYLGEIHKLNPILRGVIEVNPDALLQADKADKEKKAKSLRSLEGL
HGIPILLKDNIATKDKMNTTAGSFALLKSVVPRDAGVVRKLRKAGAIILGKASLSEWTGL
RFVFPYGWCARTGQGRNPYVLSATPCGSSSGSAISVAANLAAVSLGTETMGSILCPSHFN
SVVGIKPTVGLTSRAGVVPISPRQDTVGPICRTVSDAVEVLDVIVGFDKRDKATRTASKY
IPRGGYKQFLNANGLKGKRLGIVRNPPYMFENVSVQPQVFEHHFHTLRQGGAVLVDHLKI
ANIDVFFGSTGVEALEAELKISLNAYLKELVASPVRTLADVIAFNNKFSHLEKVKEYGQD
LFLQAQATKGINKKTLLKLARFSRNGFEKLMKKHKLDAMVAPTADIIHVLAIGGFPGIDV
PAGYDGKGVPFGICFGGLKGSEPKLIEIAYSFEQATKIRKPPSFKP

Transcript Sequence

Transcript ID

VIT_03s0038g02030.t01
Transcript Infomation

cdna chromosome:12X:3:1402181:1405517:1 gene:VIT_03s0038g02030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCCATCACAGGCCATGAATTCTCAATCAAAGAAGCAACTGTCCACGACTTTCGCATGGC
TTTCCAACAAAACAAACTCACCTCACGGAAGCTTGTTAGGTTCTACCTGGGTGAAATTCA
CAAACTCAACCCAATTCTTCGTGGGGTGATAGAGGTGAACCCAGATGCACTCCTCCAAGC
AGATAAGGCTGACAAAGAGAAGAAGGCTAAGTCACTTCGGTCGCTGGAGGGGCTGCATGG
CATTCCTATTCTGCTTAAGGATAATATTGCAACCAAGGACAAGATGAACACAACAGCTGG
GTCATTTGCACTGCTTAAATCGGTGGTGCCAAGGGATGCAGGCGTGGTGAGGAAGTTGAG
GAAGGCTGGGGCTATCATACTGGGAAAGGCTAGCCTGAGTGAGTGGACTGGTTTGCGCTT
TGTTTTTCCTTATGGCTGGTGTGCCAGAACTGGCCAAGGTCGGAACCCTTATGTTCTGTC
AGCAACTCCTTGTGGGTCAAGTAGTGGATCAGCTATATCAGTAGCAGCAAATTTAGCAGC
AGTTTCATTAGGGACGGAAACTATGGGATCCATCTTATGTCCATCCCATTTTAATTCAGT
AGTGGGCATCAAACCAACAGTAGGTCTCACCAGCCGAGCTGGGGTGGTTCCAATCTCTCC
CAGGCAGGACACTGTTGGGCCCATCTGCAGGACAGTCTCCGACGCTGTAGAGGTACTGGA
TGTCATTGTAGGTTTTGACAAGAGGGATAAAGCAACCAGGACAGCATCCAAGTACATACC
AAGGGGTGGCTACAAGCAATTTCTCAATGCAAATGGGCTCAAGGGGAAGAGATTAGGAAT
AGTGAGGAATCCTCCCTATATGTTTGAGAATGTCTCTGTCCAGCCTCAAGTTTTTGAGCA
TCATTTCCACACACTAAGGCAAGGAGGTGCGGTTTTGGTAGACCACCTGAAAATAGCAAA
CATCGATGTTTTCTTTGGCTCCACCGGAGTAGAAGCACTAGAGGCTGAGTTAAAAATATC
CTTGAATGCTTACCTGAAAGAGCTGGTAGCATCCCCAGTAAGAACTTTGGCTGATGTGAT
AGCCTTCAACAACAAATTCTCACATTTAGAAAAGGTCAAGGAGTATGGACAAGATCTGTT
TCTGCAAGCCCAAGCCACAAAAGGAATAAACAAGAAAACTTTGTTAAAATTAGCAAGATT
TTCAAGGAATGGATTCGAGAAGTTGATGAAGAAGCATAAGCTGGACGCAATGGTAGCTCC
TACTGCAGATATTATTCATGTTCTCGCCATTGGAGGATTCCCAGGAATTGATGTTCCAGC
TGGATATGATGGAAAAGGAGTACCATTTGGCATTTGTTTTGGGGGCCTAAAGGGCTCTGA
GCCAAAGCTGATCGAGATTGCATATAGCTTCGAGCAGGCAACTAAGATTAGGAAGCCACC
TTCATTTAAACCTTGA