Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g01960.t01
CDS Infomation

cds chromosome:12X:3:1362167:1363750:1 gene:VIT_03s0038g01960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGCCCCTCAACCTCCTATTCACAGCTTTTCTCATTCTTGCTGCAGCCATTGAT
GGGGCTCATGCAGATGCCATGGTCACGGGCACCGTCTTCTGCGACCAATGCAAGGATGGA
CAGAGATCCCTCTTCGATTATCCCCTCTATGGAATAAAGGTTACCATGGCATGTGCCAAC
AGTAATGGACAAATCACAATGTGGAGGGAAGAGACTACAAATTGGTTTGGAACCTATGCA
ATGAGGTTTGATGGTGCCCCAGATTTGACTGGTTGTTATGCACAAATTTCAGGCAGTGGA
CAGGGGTCAACAGGTTGTAGAGCAGCTGCTGGTCCTGCCCAGTCTGTTAGACTTATGTTC
AGGATGTTTGATATGGAGATGTATGCAGTGGATTCCTTGCTTTCTCAGCCTGCTCAGCCC
ATGTCCTTTTGCTCAAGATCCTCTACCCCAGTTCCTACTCCAGGAACTCCATCTAGGCCT
CCATCATTTCAGCTTCCGCCAGTTCCACGAATGCCACCAATGCCTCCATTGCCTCCATTG
CCTCCAGCACCACCAGTGCCCTTCCTGGAAGCCTCAGCCTGTTCACACGAGATATGGACA
GCTCCAGAGTACAAATGCTACTGGAAGGTGGTGAACCCAGATATGAAAGTAGCATCTGTG
TTTGGACTGCTAGCAGCACAGAAGTATGGGACAGACATGACCCTGCGGGAAGGCCTGCAA
GGGAGAGGAGACCCTTACAGGACCCTCCTCAGAGAGGCCATAACTTCACTGCTCAACTCC
TACAATAGTCTTCTCTTCCCATACCATACCCTTGGTGTCATCCAGCATATGAGTTTGGCC
TTGATGGGGTCCCAACAGAATGTCCTCCTCACAGCTCTACGCTTCAAGAGGGCAAATTCT
GGCTCCGGCAACCTCACCTGCAAGTTCACTGCCTGCAAGTGA

Peptide Sequence

PEP ID

VIT_03s0038g01960.t01
PEP Infomation

pep chromosome:12X:3:1362167:1363750:1 gene:VIT_03s0038g01960 transcript:VIT_03s0038g01960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLPLNLLFTAFLILAAAIDGAHADAMVTGTVFCDQCKDGQRSLFDYPLYGIKVTMACAN
SNGQITMWREETTNWFGTYAMRFDGAPDLTGCYAQISGSGQGSTGCRAAAGPAQSVRLMF
RMFDMEMYAVDSLLSQPAQPMSFCSRSSTPVPTPGTPSRPPSFQLPPVPRMPPMPPLPPL
PPAPPVPFLEASACSHEIWTAPEYKCYWKVVNPDMKVASVFGLLAAQKYGTDMTLREGLQ
GRGDPYRTLLREAITSLLNSYNSLLFPYHTLGVIQHMSLALMGSQQNVLLTALRFKRANS
GSGNLTCKFTACK

Transcript Sequence

Transcript ID

VIT_03s0038g01960.t01
Transcript Infomation

cdna chromosome:12X:3:1362167:1363750:1 gene:VIT_03s0038g01960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATGAATCTTGTTTGTGCTCATTCACATTCTGATCCACACCAGCTTTTCTCTCTTTTAGT
GTTCTACTTTCTTGCTTGGTTTTCCCACTGCTCCCAGGCCTCTCATGGATTTGCCCCTCA
ACCTCCTATTCACAGCTTTTCTCATTCTTGCTGCAGCCATTGATGGGGCTCATGCAGATG
CCATGGTCACGGGCACCGTCTTCTGCGACCAATGCAAGGATGGACAGAGATCCCTCTTCG
ATTATCCCCTCTATGGAATAAAGGTTACCATGGCATGTGCCAACAGTAATGGACAAATCA
CAATGTGGAGGGAAGAGACTACAAATTGGTTTGGAACCTATGCAATGAGGTTTGATGGTG
CCCCAGATTTGACTGGTTGTTATGCACAAATTTCAGGCAGTGGACAGGGGTCAACAGGTT
GTAGAGCAGCTGCTGGTCCTGCCCAGTCTGTTAGACTTATGTTCAGGATGTTTGATATGG
AGATGTATGCAGTGGATTCCTTGCTTTCTCAGCCTGCTCAGCCCATGTCCTTTTGCTCAA
GATCCTCTACCCCAGTTCCTACTCCAGGAACTCCATCTAGGCCTCCATCATTTCAGCTTC
CGCCAGTTCCACGAATGCCACCAATGCCTCCATTGCCTCCATTGCCTCCAGCACCACCAG
TGCCCTTCCTGGAAGCCTCAGCCTGTTCACACGAGATATGGACAGCTCCAGAGTACAAAT
GCTACTGGAAGGTGGTGAACCCAGATATGAAAGTAGCATCTGTGTTTGGACTGCTAGCAG
CACAGAAGTATGGGACAGACATGACCCTGCGGGAAGGCCTGCAAGGGAGAGGAGACCCTT
ACAGGACCCTCCTCAGAGAGGCCATAACTTCACTGCTCAACTCCTACAATAGTCTTCTCT
TCCCATACCATACCCTTGGTGTCATCCAGCATATGAGTTTGGCCTTGATGGGGTCCCAAC
AGAATGTCCTCCTCACAGCTCTACGCTTCAAGAGGGCAAATTCTGGCTCCGGCAACCTCA
CCTGCAAGTTCACTGCCTGCAAGTGATTCATCCATTGCTAGACCTATTTCAATCCTCTCT
CTATATTATATATATATATATATATATATATATGTATGCTATTTCCTTATTTCTACTTCT
TGGGTATACTAGTATTTGTATTGAATTGACTGACGTCTCCATATTATGATCAATTATTAT
AGTATTTGTAGGATTTTAGCAGTC