Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g01930.t01
CDS Infomation

cds chromosome:12X:3:1347905:1348611:1 gene:VIT_03s0038g01930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A5BQN6]
Sequence

ATGACGAACCCTAGGGTCTTCTTCGATGTCTCCATCGGCGGTGCTCCCGCCGGTAGGATT
GTGATGGAGTTGTACGCTGACACAACTCCACGAACCGCCGAGAACTTCCGCGCCCTCTGC
ACCGGCGAGAAAGGCGTCGGCCGGAGCGGCAAGCCTCTGCACTTCAAAGGCTCAATCTTC
CACAGAGTGATCCCAAGTTTCATGTGCCAGGGCGGCGACTTCACCAGGGGCGACGGCACC
GGCGGCGAGTCCATCTACGGTGCCAAGTTCGAGGACGAGAACTTCATCAAGAAGCACACC
GGTCCCGGCATACTGTCGATGGCGAACGCCGGTCCTGGAACAAACGGATCGCAGTTCTTC
ATATGTACGGATAAGACGGAGTGGCTGGATGGGAAGCACGTGGTGTTCGGCCAGGTGGTA
GAGGGGATGGATGTGGTGAAGGCCGTTGAGAAGGTAGGCTCAGGCTCCGGAAGGACCGCC
AAGACCGTGAAGATCGAGGACTGTGGTCAGCTCTCTTGA

Peptide Sequence

PEP ID

VIT_03s0038g01930.t01
PEP Infomation

pep chromosome:12X:3:1347905:1348611:1 gene:VIT_03s0038g01930 transcript:VIT_03s0038g01930.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A5BQN6]
Sequence

MTNPRVFFDVSIGGAPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHFKGSIF
HRVIPSFMCQGGDFTRGDGTGGESIYGAKFEDENFIKKHTGPGILSMANAGPGTNGSQFF
ICTDKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSGSGRTAKTVKIEDCGQLS

Transcript Sequence

Transcript ID

VIT_03s0038g01930.t01
Transcript Infomation

cdna chromosome:12X:3:1347905:1348611:1 gene:VIT_03s0038g01930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A5BQN6]
Sequence

AGGGAGAGAGAGAGAGAATCGTAGCTCAGCAAAAATGACGAACCCTAGGGTCTTCTTCGA
TGTCTCCATCGGCGGTGCTCCCGCCGGTAGGATTGTGATGGAGTTGTACGCTGACACAAC
TCCACGAACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCCGGAG
CGGCAAGCCTCTGCACTTCAAAGGCTCAATCTTCCACAGAGTGATCCCAAGTTTCATGTG
CCAGGGCGGCGACTTCACCAGGGGCGACGGCACCGGCGGCGAGTCCATCTACGGTGCCAA
GTTCGAGGACGAGAACTTCATCAAGAAGCACACCGGTCCCGGCATACTGTCGATGGCGAA
CGCCGGTCCTGGAACAAACGGATCGCAGTTCTTCATATGTACGGATAAGACGGAGTGGCT
GGATGGGAAGCACGTGGTGTTCGGCCAGGTGGTAGAGGGGATGGATGTGGTGAAGGCCGT
TGAGAAGGTAGGCTCAGGCTCCGGAAGGACCGCCAAGACCGTGAAGATCGAGGACTGTGG
TCAGCTCTCTTGAAATGCTGTTCCTCATCCCCTACTCTCTTTACTATTTCTGCGGTATTA
GCCTGTCTCGTCTAGCCTCTGAGTCCTGGTTGTCACCTTACGTTTCATGTGTCTGTCCCT
GTCGTTTGGTAGGTTGCACAAACCTCCATATCTCTATGTATTGCAGT