Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g01810.t01
CDS Infomation

cds chromosome:12X:3:1263090:1274110:1 gene:VIT_03s0038g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGGGCATGGGAGATGGGTACGTGGGCACGGCCCAGGATGCAGTGAGGATCCGGAGA
CTGGAGAAGCAGAGAGAGGTGGAGAGGAGGAAAATCCAAGAGCTCAAGAACAAGTCCGCT
TCTTCCAAAGGCCAGACCGGTCTCCTTCAGTTCGGCTCCGGCACCTCCGAGATCCTTGAT
ACTGCATTTAAGAAGGAAACTGTTGGTCTTGTGACTAGAGAGGAATATGTTGAGAAGAGG
GTTAATATCCGGAATAAAATTGAAGAGGAAGAAAAGGAGAAATTGCAGAAGCTGCAACAG
GAGGAGGAGGAGCTGCAATTACAAAAACGAAAAAAGAGGAAAATAAAGGGAAATTCTCGA
TTGTCTTTTTCTGATGATATTGAGAATGGAAGTGAAGAGGAAGATGGAGAAAACGAAGGC
AAAGAATCAAAGAAGTTTGGAAAATTTGGAAAAGATCCCACAGTAGAAACAAGCTTTCTA
CCAGACAGTGAGCGAGAGGCAGAGGAACAAGCTGAGAGGGAAAGGTTAAGGAAACTGTGG
CTTCGCGAGCAGGAACAGATTCGAAATGAGCCACTTGAGATCACTTACAGCTACTGGGAT
GGGGCAGGTCATAGGCGAGTAATCCAAGTACGCAAAGGTGATTCCATAGGGGAGTTTCTT
CGGGCTGTTCAGCAGCAACTTGCACCAGAGTTTAGGGAAATTCGTACCACCTCTGTGGAG
AATCTGCTTTATGTGAAAGAAGATCTTATCATTCCTCATCAACACAGTTTCTATGAACTA
ATCATTAACAAGGCCAGGGGCAAAAGTGGACCGCTCTTCCACTTCGATGTGCATGAGGAT
GTGCGAACAATTGCTGATGCAACAATAGAGAAGGATGAGTCCCATGCTGGGAAAGTTGTC
GAAAGGCACTGGTACGAAAAGAACAAACACATCTTTCCTGCTTCAAGATGGGAGATATAC
GACCCCACGAAGAAATGGGAGCGCTACACCATCCATGGAGATTGA

Peptide Sequence

PEP ID

VIT_03s0038g01810.t01
PEP Infomation

pep chromosome:12X:3:1263090:1274110:1 gene:VIT_03s0038g01810 transcript:VIT_03s0038g01810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGMGDGYVGTAQDAVRIRRLEKQREVERRKIQELKNKSASSKGQTGLLQFGSGTSEILD
TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRKKRKIKGNSR
LSFSDDIENGSEEEDGENEGKESKKFGKFGKDPTVETSFLPDSEREAEEQAERERLRKLW
LREQEQIRNEPLEITYSYWDGAGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREIRTTSVE
NLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVV
ERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD

Transcript Sequence

Transcript ID

VIT_03s0038g01810.t01
Transcript Infomation

cdna chromosome:12X:3:1263090:1274110:1 gene:VIT_03s0038g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAAGAGAAAGATGTCGGGCATGGGAGATGGGTACGTGGGCACGGCCCAGGATGCAGT
GAGGATCCGGAGACTGGAGAAGCAGAGAGAGGTGGAGAGGAGGAAAATCCAAGAGCTCAA
GAACAAGTCCGCTTCTTCCAAAGGCCAGACCGGTCTCCTTCAGTTCGGCTCCGGCACCTC
CGAGATCCTTGATACTGCATTTAAGAAGGAAACTGTTGGTCTTGTGACTAGAGAGGAATA
TGTTGAGAAGAGGGTTAATATCCGGAATAAAATTGAAGAGGAAGAAAAGGAGAAATTGCA
GAAGCTGCAACAGGAGGAGGAGGAGCTGCAATTACAAAAACGAAAAAAGAGGAAAATAAA
GGGAAATTCTCGATTGTCTTTTTCTGATGATATTGAGAATGGAAGTGAAGAGGAAGATGG
AGAAAACGAAGGCAAAGAATCAAAGAAGTTTGGAAAATTTGGAAAAGATCCCACAGTAGA
AACAAGCTTTCTACCAGACAGTGAGCGAGAGGCAGAGGAACAAGCTGAGAGGGAAAGGTT
AAGGAAACTGTGGCTTCGCGAGCAGGAACAGATTCGAAATGAGCCACTTGAGATCACTTA
CAGCTACTGGGATGGGGCAGGTCATAGGCGAGTAATCCAAGTACGCAAAGGTGATTCCAT
AGGGGAGTTTCTTCGGGCTGTTCAGCAGCAACTTGCACCAGAGTTTAGGGAAATTCGTAC
CACCTCTGTGGAGAATCTGCTTTATGTGAAAGAAGATCTTATCATTCCTCATCAACACAG
TTTCTATGAACTAATCATTAACAAGGCCAGGGGCAAAAGTGGACCGCTCTTCCACTTCGA
TGTGCATGAGGATGTGCGAACAATTGCTGATGCAACAATAGAGAAGGATGAGTCCCATGC
TGGGAAAGTTGTCGAAAGGCACTGGTACGAAAAGAACAAACACATCTTTCCTGCTTCAAG
ATGGGAGATATACGACCCCACGAAGAAATGGGAGCGCTACACCATCCATGGAGATTGATT
ATCATCTACTAGACAAATATTTACATTATTTGGCGTATCTGTAACATGTTTCTTACAACT
TGCTAAAGTCTATTTCCTCATCAGATACCGGCTTCTCTGTACTAATTAAAGAGTGCTTAG
ATTGATGACTCTGGGGTAATCTCATTGTTGTTTA