Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g01600.t01
CDS Infomation

cds chromosome:12X:3_random:1082862:1088342:1 gene:VIT_03s0038g01600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACACACAAGTTGTCATGAATTGGCGCTTCAATGAATCAAAAAAGTTGTTTCATAGC
AGAGAAAACTTTCTTGTTGTAGCAGACCGATATATTAAAGAGAATGGAGCTGAAGCTTTG
GCGAAACTAATTGCTAGTAAGTTGAAGAGCACAAAGCCTAATGTTGAAGTGAAAGAGATC
GAAGCACATGCAGCACCGGAGAAAAAAGGGGAACAGTGGAAGTGTGAAGAGCCTAATGTT
TCTCAAAAGGAGATCCAAGTAGTCGAAGTAACAGAGATAAAAAGTGGGGAGGATGGAAGA
AATAGGTGTAAAGGGCCTAATGCTGCTAAGAAGGAGATCAAAGTGACAGAAGTAACACAG
AGAACATTTGGTGGTACAGCACATTGGGTTAAACAAACAGAGCTAAATCTTGGTGAAACT
AAAAGTAATACAACCTGTATTGCGGGGATAAAAGAAAGGGCAACAGCACTGATGACTGCC
GAAATTGAGGCATGTAGAGACGATAGAACCCCAGAGATATCTCTTCATAAGAAAGTCCAG
AAAGAGTGGGCTTGTGCTGTATGCCTGCTCACAACCCAAAGTGAGGCTACCTTGAATTCC
CATCTTCAAGGGAAGAGACATCAGGCCACTTCTGAGCAGCTGAAAGCCAAAAACCAGGCA
ACCAAAGACAATGGTTCCCCATCTGCTTCAATGGCCAAGATATCTGATCAGTCCACCAAA
GAGGAGCAACCGAAGTGTACTTCCAACAATCTGAATTCTAAAAACAATGGAATCTCAGCT
GCTTCAACAGTGAAGAAACCAGATGAGACCAAAGATGATAAGCGACAAAAGTGTGCATCT
AGCAATGGACCGAACCAGAAGAATAAAAAAGTGTGGGCTTGTGCTCTATGCCAGGTCACA
ACCCAAAGTGAGGCTACCTTGAATTCCCATCTTCAAGGAAAGAGACATCAGGCCACTTCT
GAGCAGCTGAAAGCCAAAAACCAGGCAATCAAAACCAATGGCTCCCCATCTGCTTCAATG
GCCAAGAAATCTGATGGGTCCACCAAAGAGGAGCAACTGAAGTGTACTTCCAACAATCTG
AATTCCAAAAACAATGGCATCTCAGCTGCTTCAACAGTGAAGAAACCTGATAAGACCAAA
GAGGATAAGCAACAAAAGTGTGCATCTAGCAATGGACCGAACCAGAAGAATAACAAAAAT
TGGGCTTGTGCTCTATGCCAGGTCACAACCCAAAGTGAGGCTACCTTGAATTCCCATCTT
CAAGGGAAGAGACATCAGGCCACTTCTGAGCAGCCGAAAGGCAAAAACAAGGCAACCAAA
GCCAGTGGTTCCCCATCTGCTTCAATGGCCAAGAAATCTGATCAGTCCACCAAAGAGGAG
CAACTGAAGTGTACTTCCAACAATCTAAATTCCAAAAACAATGGAATCTCAGCTGCTTCA
AAAGTGAAGAAACCAGATGATACCAAAGATGATGAGCGACAAAAGTGTGCATCTAGCAAT
GGACGGAACCAGAAGAATAACAAAAAGCAAGAGAAGGCTCTAGTTCCTGAGACCAATGAG
CAAGGCCATCAGAAGAACTTAAAGCAAACTGGCGATGGAATGAAAGAGTTGGGATCATGG
TGCAATATCTGTAATGTAAGCTGCACAAGTGAGCTTGACATGGCCTCTCATCTGAATGGA
AGGAGGCATTTTGATAGTATAAAACAGCTATCTGAATTATGGTGCAGTAACTGCAATGTA
AAGTGCAACAGTGAGGTTGACATGGCCTCTCACCAAAATGGGAGAAGGCACTTGGAGCAG
CTCAAGGAACGGTTGGGATTATGGTGCAGCATCTGTAGTGTGAGTTGCAACAGCAAGGTG
GACATGGATTCTCACCTAAATGGGAGGAGGCACTTGGACCAGATCGAGGAACAGTTAAGA
TTCTGGTGCGGGGCATATTATGTTAGGAAGAGGTGGAAAGGTTCAAATTAG

Peptide Sequence

PEP ID

VIT_03s0038g01600.t01
PEP Infomation

pep chromosome:12X:3_random:1082862:1088342:1 gene:VIT_03s0038g01600 transcript:VIT_03s0038g01600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDTQVVMNWRFNESKKLFHSRENFLVVADRYIKENGAEALAKLIASKLKSTKPNVEVKEI
EAHAAPEKKGEQWKCEEPNVSQKEIQVVEVTEIKSGEDGRNRCKGPNAAKKEIKVTEVTQ
RTFGGTAHWVKQTELNLGETKSNTTCIAGIKERATALMTAEIEACRDDRTPEISLHKKVQ
KEWACAVCLLTTQSEATLNSHLQGKRHQATSEQLKAKNQATKDNGSPSASMAKISDQSTK
EEQPKCTSNNLNSKNNGISAASTVKKPDETKDDKRQKCASSNGPNQKNKKVWACALCQVT
TQSEATLNSHLQGKRHQATSEQLKAKNQAIKTNGSPSASMAKKSDGSTKEEQLKCTSNNL
NSKNNGISAASTVKKPDKTKEDKQQKCASSNGPNQKNNKNWACALCQVTTQSEATLNSHL
QGKRHQATSEQPKGKNKATKASGSPSASMAKKSDQSTKEEQLKCTSNNLNSKNNGISAAS
KVKKPDDTKDDERQKCASSNGRNQKNNKKQEKALVPETNEQGHQKNLKQTGDGMKELGSW
CNICNVSCTSELDMASHLNGRRHFDSIKQLSELWCSNCNVKCNSEVDMASHQNGRRHLEQ
LKERLGLWCSICSVSCNSKVDMDSHLNGRRHLDQIEEQLRFWCGAYYVRKRWKGSN

Transcript Sequence

Transcript ID

VIT_03s0038g01600.t01
Transcript Infomation

cdna chromosome:12X:3_random:1082862:1088342:1 gene:VIT_03s0038g01600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACACACAAGTTGTCATGAATTGGCGCTTCAATGAATCAAAAAAGTTGTTTCATAGC
AGAGAAAACTTTCTTGTTGTAGCAGACCGATATATTAAAGAGAATGGAGCTGAAGCTTTG
GCGAAACTAATTGCTAGTAAGTTGAAGAGCACAAAGCCTAATGTTGAAGTGAAAGAGATC
GAAGCACATGCAGCACCGGAGAAAAAAGGGGAACAGTGGAAGTGTGAAGAGCCTAATGTT
TCTCAAAAGGAGATCCAAGTAGTCGAAGTAACAGAGATAAAAAGTGGGGAGGATGGAAGA
AATAGGTGTAAAGGGCCTAATGCTGCTAAGAAGGAGATCAAAGTGACAGAAGTAACACAG
AGAACATTTGGTGGTACAGCACATTGGGTTAAACAAACAGAGCTAAATCTTGGTGAAACT
AAAAGTAATACAACCTGTATTGCGGGGATAAAAGAAAGGGCAACAGCACTGATGACTGCC
GAAATTGAGGCATGTAGAGACGATAGAACCCCAGAGATATCTCTTCATAAGAAAGTCCAG
AAAGAGTGGGCTTGTGCTGTATGCCTGCTCACAACCCAAAGTGAGGCTACCTTGAATTCC
CATCTTCAAGGGAAGAGACATCAGGCCACTTCTGAGCAGCTGAAAGCCAAAAACCAGGCA
ACCAAAGACAATGGTTCCCCATCTGCTTCAATGGCCAAGATATCTGATCAGTCCACCAAA
GAGGAGCAACCGAAGTGTACTTCCAACAATCTGAATTCTAAAAACAATGGAATCTCAGCT
GCTTCAACAGTGAAGAAACCAGATGAGACCAAAGATGATAAGCGACAAAAGTGTGCATCT
AGCAATGGACCGAACCAGAAGAATAAAAAAGTGTGGGCTTGTGCTCTATGCCAGGTCACA
ACCCAAAGTGAGGCTACCTTGAATTCCCATCTTCAAGGAAAGAGACATCAGGCCACTTCT
GAGCAGCTGAAAGCCAAAAACCAGGCAATCAAAACCAATGGCTCCCCATCTGCTTCAATG
GCCAAGAAATCTGATGGGTCCACCAAAGAGGAGCAACTGAAGTGTACTTCCAACAATCTG
AATTCCAAAAACAATGGCATCTCAGCTGCTTCAACAGTGAAGAAACCTGATAAGACCAAA
GAGGATAAGCAACAAAAGTGTGCATCTAGCAATGGACCGAACCAGAAGAATAACAAAAAT
TGGGCTTGTGCTCTATGCCAGGTCACAACCCAAAGTGAGGCTACCTTGAATTCCCATCTT
CAAGGGAAGAGACATCAGGCCACTTCTGAGCAGCCGAAAGGCAAAAACAAGGCAACCAAA
GCCAGTGGTTCCCCATCTGCTTCAATGGCCAAGAAATCTGATCAGTCCACCAAAGAGGAG
CAACTGAAGTGTACTTCCAACAATCTAAATTCCAAAAACAATGGAATCTCAGCTGCTTCA
AAAGTGAAGAAACCAGATGATACCAAAGATGATGAGCGACAAAAGTGTGCATCTAGCAAT
GGACGGAACCAGAAGAATAACAAAAAGCAAGAGAAGGCTCTAGTTCCTGAGACCAATGAG
CAAGGCCATCAGAAGAACTTAAAGCAAACTGGCGATGGAATGAAAGAGTTGGGATCATGG
TGCAATATCTGTAATGTAAGCTGCACAAGTGAGCTTGACATGGCCTCTCATCTGAATGGA
AGGAGGCATTTTGATAGTATAAAACAGCTATCTGAATTATGGTGCAGTAACTGCAATGTA
AAGTGCAACAGTGAGGTTGACATGGCCTCTCACCAAAATGGGAGAAGGCACTTGGAGCAG
CTCAAGGAACGGTTGGGATTATGGTGCAGCATCTGTAGTGTGAGTTGCAACAGCAAGGTG
GACATGGATTCTCACCTAAATGGGAGGAGGCACTTGGACCAGATCGAGGAACAGTTAAGA
TTCTGGTGCGGGGCATATTATGTTAGGAAGAGGTGGAAAGGTTCAAATTAG