Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g00370.t01
CDS Infomation

cds chromosome:12X:3_random:357420:361583:-1 gene:VIT_03s0038g00370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCATTTTCGAGAATTGGAGTCAGCTCAGAAGTAGGTGGTGTAAGATCGTCTTCA
GGTGGTGATGATGGAGTAGGTACACTAATGGAGTTTGTGGGGAAGAGAGGGGTTGACGTG
GGAGATGAGTTGGTGGTGTTGTTTCATCATATACAGTATGCTTGCAAGAGAATTGCAGCT
CTTGTGGCCTCTCCTTTCAATTCAACTCTGGGGAAGCATTCGGGTTTGGGAGGTGGTGGG
GGCGCGGGTGGCTCCGATAGAGACGCCCCAAAGCCCCTCGATATTGTTTCGAATGAAATC
ATTTTATCATCTCTCCGGAACTCTGGAAAAGTAGCAGTCATGGCTTCAGAAGAAGATGAT
TTTCCGGTTTGGATAAGTGATGATGGCCCATTTGTGGTGGTCACAGATCCTCTTGATGGT
TCCCGAAATATTGATGCATCCATTCCTACTGGAACAATTTTTGGGATCTATAACCGCCTT
GTTGAACTAGATCATTTGCCCAAGGAAGAGAAGACAATGCTGAATTCACTTCAGAGTGGA
TTGAAGCTTGTAGCTGCGGTCTATGTTCTCTATTCATCGGCCACAATACTATGCACCAGT
TTTGGTTCAGGGACTCATGCATTCACCCTTGATCATTCAACAGGAGACTTTATTCTCACA
CATCCAAACATTAAAATTCCTCCACGAGGGCAAATCTATTCTGTAAATGATGCACGATAT
TTTGACTGGCCTCAAGGTTTAAGACAATATATTGACACTGTAAGACAAGGCAAAGGCAAA
TATCCCAAGAAGTACTCAGCTCGTTATATATGTTCTCTAGTCGCTGATTTTCACAGGACT
CTAATGTATGGGGGAGTGGCAATGAATCCAAGGAGCCATCTTCGTCTGGTTTATGAGGCG
AATCCTCTTAGTTTTCTGGTGGAGCAGGCCGGGGGCAGGGGTTCTGATGGTAAAATTAGA
ATCCTTTCAATCCAACCGGTCAAGCTGCATCAAAGGCTTCCTCTGTTTTTGGGAAGTCCA
GAGGACATTGAAGAGTTGGAGAGTTATGGGAATGTGCAACAGAAAGTAAATCCTGGTTAT
GAAGTCTGA

Peptide Sequence

PEP ID

VIT_03s0038g00370.t01
PEP Infomation

pep chromosome:12X:3_random:357420:361583:-1 gene:VIT_03s0038g00370 transcript:VIT_03s0038g00370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASFSRIGVSSEVGGVRSSSGGDDGVGTLMEFVGKRGVDVGDELVVLFHHIQYACKRIAA
LVASPFNSTLGKHSGLGGGGGAGGSDRDAPKPLDIVSNEIILSSLRNSGKVAVMASEEDD
FPVWISDDGPFVVVTDPLDGSRNIDASIPTGTIFGIYNRLVELDHLPKEEKTMLNSLQSG
LKLVAAVYVLYSSATILCTSFGSGTHAFTLDHSTGDFILTHPNIKIPPRGQIYSVNDARY
FDWPQGLRQYIDTVRQGKGKYPKKYSARYICSLVADFHRTLMYGGVAMNPRSHLRLVYEA
NPLSFLVEQAGGRGSDGKIRILSIQPVKLHQRLPLFLGSPEDIEELESYGNVQQKVNPGY
EV

Transcript Sequence

Transcript ID

VIT_03s0038g00370.t01
Transcript Infomation

cdna chromosome:12X:3_random:357420:361583:-1 gene:VIT_03s0038g00370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGAATCCCCATTCTAATCCAACTCCAACATGCACTCACCCGCTATACCACTATACTCAAC
TTCAATTTTCCCGCCAAAACTCCATATTTTCACGCCAAGCAGAAGACTTTTTTCCAGAAC
AGTTCTTCTTCAGCAAAGAATGGCTTCATTTTCGAGAATTGGAGTCAGCTCAGAAGTAGG
TGGTGTAAGATCGTCTTCAGGTGGTGATGATGGAGTAGGTACACTAATGGAGTTTGTGGG
GAAGAGAGGGGTTGACGTGGGAGATGAGTTGGTGGTGTTGTTTCATCATATACAGTATGC
TTGCAAGAGAATTGCAGCTCTTGTGGCCTCTCCTTTCAATTCAACTCTGGGGAAGCATTC
GGGTTTGGGAGGTGGTGGGGGCGCGGGTGGCTCCGATAGAGACGCCCCAAAGCCCCTCGA
TATTGTTTCGAATGAAATCATTTTATCATCTCTCCGGAACTCTGGAAAAGTAGCAGTCAT
GGCTTCAGAAGAAGATGATTTTCCGGTTTGGATAAGTGATGATGGCCCATTTGTGGTGGT
CACAGATCCTCTTGATGGTTCCCGAAATATTGATGCATCCATTCCTACTGGAACAATTTT
TGGGATCTATAACCGCCTTGTTGAACTAGATCATTTGCCCAAGGAAGAGAAGACAATGCT
GAATTCACTTCAGAGTGGATTGAAGCTTGTAGCTGCGGTCTATGTTCTCTATTCATCGGC
CACAATACTATGCACCAGTTTTGGTTCAGGGACTCATGCATTCACCCTTGATCATTCAAC
AGGAGACTTTATTCTCACACATCCAAACATTAAAATTCCTCCACGAGGGCAAATCTATTC
TGTAAATGATGCACGATATTTTGACTGGCCTCAAGGTTTAAGACAATATATTGACACTGT
AAGACAAGGCAAAGGCAAATATCCCAAGAAGTACTCAGCTCGTTATATATGTTCTCTAGT
CGCTGATTTTCACAGGACTCTAATGTATGGGGGAGTGGCAATGAATCCAAGGAGCCATCT
TCGTCTGGTTTATGAGGCGAATCCTCTTAGTTTTCTGGTGGAGCAGGCCGGGGGCAGGGG
TTCTGATGGTAAAATTAGAATCCTTTCAATCCAACCGGTCAAGCTGCATCAAAGGCTTCC
TCTGTTTTTGGGAAGTCCAGAGGACATTGAAGAGTTGGAGAGTTATGGGAATGTGCAACA
GAAAGTAAATCCTGGTTATGAAGTCTGATGTATGACATTTGTAGGGGTTATGAATTAACC
AAGGATTGCTTCTTGTCAGTACTCAGTAGGTTGTGTATTCAGATTTTACATTACAAATCC
AGATATCTTACTTCATCCCAAATCCAAATGGTTGTGTAATATATTGTTGTGTTTGATGGA
AAATGTGTAACTGTGGTGTTACTGTTAATAAG