Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0038g00320.t01
CDS Infomation

cds chromosome:12X:3:291374:302911:-1 gene:VIT_03s0038g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACACACCTCGCCATTTCGCTTTCTCCGGTTCCCGCGTACAGTTCTTCCAGTTCT
CTCCATTTTCGGAGTTCATTGCTTCCAAGATGGACCATTGGGATGGAAAAGCTCAAGGCA
TTTTCTTCATCTGCTTTAATGGGATATAATAAGAGGAGAACTTTGATATGTGCAGTCAAT
CAAGATGCTGAAAAATTGTTCCAAAAGACTGTTGAAGTGGATAGACTGATAGATATGTTG
CGAGAAGCAAATGCAAATGAACTTCAGAAGCTTGTGGTTGAAAATGTCCTTGCTTTCAAT
GAGAGCTTTTGGATACGACTTGCAGCAAGAACTGATACCTGCAAATCTGAGGATGATAAA
AAAGATTATGAGGAATTGGCTTTATCTGTAATGAGCATAGTGGATCGCCTTGTCCATAAG
ACCAAGCAAAAAATAGAGTCAGCTACTGATGTTTTGAAGGAAATTTTAAGGCCTGTAGTT
GATGAAGAGGAAGAGATTTCATGGCCTCCTAGGGATCCTGAAGCTCTCAGTCTAATGGAG
AAAGAAATAATCCAAAGGGAGCAAGAAGGGCAGCTTGACGAAGGTTTCCTTGCAGAAGTT
AGTGCACAACTACGGCAAGCAAAAGAAGATAGAGATAAGCCAGGGCTTGAGGCTATGCTG
CAAAAGGTTTTGCAACTATATGCTTCTAGAGTTCTCTCTAAACGTAGTTATGCAAAGAAA
GGGGATGAGATTTTAAAGGCTGAGTATTTTCTTGAGACCGTAATAAAAGCTCCTGAGGAA
GAATGGAATAAGTTGTTGATAAATGGTATGACAGTTGGTAAAGGGGATGTTTCACCAGAG
GTATTTTATGCTGTCATTAAGAAACGAATTGAGCGGACTTTGATACGAACGGAAGGAGGT
TCTTACCAGCAGCGCATTCTTACCGAGTATCTGAAAGGTATCCAATCAAGAGCGGAGGAA
ATTGTCCAGGTTCTTCAGAGTTGA

Peptide Sequence

PEP ID

VIT_03s0038g00320.t01
PEP Infomation

pep chromosome:12X:3:291374:302911:-1 gene:VIT_03s0038g00320 transcript:VIT_03s0038g00320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATHLAISLSPVPAYSSSSSLHFRSSLLPRWTIGMEKLKAFSSSALMGYNKRRTLICAVN
QDAEKLFQKTVEVDRLIDMLREANANELQKLVVENVLAFNESFWIRLAARTDTCKSEDDK
KDYEELALSVMSIVDRLVHKTKQKIESATDVLKEILRPVVDEEEEISWPPRDPEALSLME
KEIIQREQEGQLDEGFLAEVSAQLRQAKEDRDKPGLEAMLQKVLQLYASRVLSKRSYAKK
GDEILKAEYFLETVIKAPEEEWNKLLINGMTVGKGDVSPEVFYAVIKKRIERTLIRTEGG
SYQQRILTEYLKGIQSRAEEIVQVLQS

Transcript Sequence

Transcript ID

VIT_03s0038g00320.t01
Transcript Infomation

cdna chromosome:12X:3:291374:302911:-1 gene:VIT_03s0038g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCAAAATGGCCACACACCTCGCCATTTCGCTTTCTCCGGTTCCCGCGTACAGTTCTTCCA
GTTCTCTCCATTTTCGGAGTTCATTGCTTCCAAGATGGACCATTGGGATGGAAAAGCTCA
AGGCATTTTCTTCATCTGCTTTAATGGGATATAATAAGAGGAGAACTTTGATATGTGCAG
TCAATCAAGATGCTGAAAAATTGTTCCAAAAGACTGTTGAAGTGGATAGACTGATAGATA
TGTTGCGAGAAGCAAATGCAAATGAACTTCAGAAGCTTGTGGTTGAAAATGTCCTTGCTT
TCAATGAGAGCTTTTGGATACGACTTGCAGCAAGAACTGATACCTGCAAATCTGAGGATG
ATAAAAAAGATTATGAGGAATTGGCTTTATCTGTAATGAGCATAGTGGATCGCCTTGTCC
ATAAGACCAAGCAAAAAATAGAGTCAGCTACTGATGTTTTGAAGGAAATTTTAAGGCCTG
TAGTTGATGAAGAGGAAGAGATTTCATGGCCTCCTAGGGATCCTGAAGCTCTCAGTCTAA
TGGAGAAAGAAATAATCCAAAGGGAGCAAGAAGGGCAGCTTGACGAAGGTTTCCTTGCAG
AAGTTAGTGCACAACTACGGCAAGCAAAAGAAGATAGAGATAAGCCAGGGCTTGAGGCTA
TGCTGCAAAAGGTTTTGCAACTATATGCTTCTAGAGTTCTCTCTAAACGTAGTTATGCAA
AGAAAGGGGATGAGATTTTAAAGGCTGAGTATTTTCTTGAGACCGTAATAAAAGCTCCTG
AGGAAGAATGGAATAAGTTGTTGATAAATGGTATGACAGTTGGTAAAGGGGATGTTTCAC
CAGAGGTATTTTATGCTGTCATTAAGAAACGAATTGAGCGGACTTTGATACGAACGGAAG
GAGGTTCTTACCAGCAGCGCATTCTTACCGAGTATCTGAAAGGTATCCAATCAAGAGCGG
AGGAAATTGTCCAGGTTCTTCAGAGTTGAGCCCATAAAGGTTCATCCATTTTGAAGTGAT
TAAAGTTGTTATCTAAACTGTACTGAAGAGAAAAGCACAGAAGAAGGCCAGCCCCATCAG
CATAAACGGACAAAACTTGAGGAATGTTTCACTATTAAATCAGTCGCTTCTAGTCAGCCG
AAGTCTTCTACATGCAATGAACTTTTTTAGCTTAAAATGCTGCGCCAAATCCGAGTACTG
GCAAGGTTTTATTTGCTTTTTGTTTTTTTCCCACTGTCATTTCAAACGATAAATCAGGAT
TCTTACCTTGTTCGTAGTTGT