Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g02320.t01
CDS Infomation

cds chromosome:12X:3:19131105:19133186:1 gene:VIT_03s0017g02320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGGGAGCAGTTGCTGAGCATGGGTTTTCCTGACGATTTGGCCTCCCAAGCTCTC
GCTGCCACAGGTGGCAAATCGATCCTCAAAGCCACCGAATGGATTCTTGGCCGCAACAAA
TCCGATTCTCAAACCCCTGACGAAAACCCCAATTCATCCCCATCCCCATCCCCATTCCAG
CCCAAGCTCGATCGCTTCTTTCACTTTCAATCCAAGCCCTCCAATCCCCCCCAAATCCAA
AAACAACACTGCGACACGCCCTCACTGCCCAGTCCCCCCTCCAAACGACTCCGTTTAGAG
GCAGAAAACAGTCCCCACCAGCCCTTATCTGAGCGAATGCGACCTCGTACTGTGGACGAT
GTGGTGGGCCAAGACCATCTTCTCTCTCACAAATCCCTGCTTCGCTCGGCCATCGATTCC
AACCGTCTTCCTTCTATAATCCTATGGGGCCCACCGGGCACCGGCAAGACCTCCATTGCC
AAGGCCATTGTCAATTCCTCCTCCCAGCCTTCCTCCTATCGATTTGTTTCCTTATCGGCT
GTCACTGCTGGTGTCAAGGACGTGAGGGACGTCGTGGAGGAGGCTAGAAAGATTAAAGTG
TCAAAGAACATGAACAGCAAGAGAACATTGTTGTTTGTGGATGAGGTTCATCGTTTCAAC
AAGTCTCAACAAGACTCTTTTTTGCCTGTAATTGAAGATGGGAGCATCGTGTTTATTGGA
GCTACAACCGAGAATCCATCATTCCATTTGATAACGCCCTTGTTGTCTCGCTGTCGAGTT
CTCACCCTCAACCCTTTACAGCCTAGTCATGTTGCTAGCCTGCTTAATCGAGCTGTTGCT
GACACGGGCAGGGGATTGGCTTGGAGCGTGGGTGGGGCGAGTATTGAAGTCAGCGATGAT
GCCATTGATTTTTTGTCCTCACATTGTGATGGCGATGCTCGTGTGGCATTAAACGCCTTG
GAAATTTCTGCTGTCACTGCAGCTGCTCGAGTACCCATTAAGCAATCAGTCTGCAAAGTT
GAAGAAAAAGAGCATGGAGAGAATTTAGTGGAAAATAATGGGGTTGGTTCATCCCAAGTG
ACCACTGTCACTTTGGATGATGCCAAGGAGGCGCTGCAATCTAAGCATCTTGCTTATGAC
AAAGCAGGGGAAGAACACTACAATCTCATCAGTGCCCTCCACAAATCGATGAGGGGTAGT
GATGCGGATGCCTCAATTTATTGGCTGGCAAGAATGTTAGAAGGAGGTGAAGAACCTTTG
TATATTGCCAGGAGACTCATCAGGTTTGCAAGTGAGGATGTTGGATTGGCTGACCCCATT
GCCCTTGTGCAGGCTGTTGCTTGCTGCCAAGCTTGCCATTTTTTGGGCATGCCTGAGTGC
AATGTGAATCTTGCACAATGTGTGGCTTACTTGGCTTTGGCTCCCAAATCTGTTTCTGTG
TATCGAGCCATTTTGGCTGCACAGGAGGTAGTGAGGGAATCTGTTGGACAGAATGAGGGA
GTGCCTCTTCATCTCAGGAATGCACCCACTAAACTAATGAAGGAACTTGGATACGGGAAG
GGCTATATCTACCCACCTGACAATCCTTCCTCTTCTACACAGAACTATCTACCACCATCA
CTTCAAGGTTACAAGTTTCTCAATTGA

Peptide Sequence

PEP ID

VIT_03s0017g02320.t01
PEP Infomation

pep chromosome:12X:3:19131105:19133186:1 gene:VIT_03s0017g02320 transcript:VIT_03s0017g02320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEREQLLSMGFPDDLASQALAATGGKSILKATEWILGRNKSDSQTPDENPNSSPSPSPFQ
PKLDRFFHFQSKPSNPPQIQKQHCDTPSLPSPPSKRLRLEAENSPHQPLSERMRPRTVDD
VVGQDHLLSHKSLLRSAIDSNRLPSIILWGPPGTGKTSIAKAIVNSSSQPSSYRFVSLSA
VTAGVKDVRDVVEEARKIKVSKNMNSKRTLLFVDEVHRFNKSQQDSFLPVIEDGSIVFIG
ATTENPSFHLITPLLSRCRVLTLNPLQPSHVASLLNRAVADTGRGLAWSVGGASIEVSDD
AIDFLSSHCDGDARVALNALEISAVTAAARVPIKQSVCKVEEKEHGENLVENNGVGSSQV
TTVTLDDAKEALQSKHLAYDKAGEEHYNLISALHKSMRGSDADASIYWLARMLEGGEEPL
YIARRLIRFASEDVGLADPIALVQAVACCQACHFLGMPECNVNLAQCVAYLALAPKSVSV
YRAILAAQEVVRESVGQNEGVPLHLRNAPTKLMKELGYGKGYIYPPDNPSSSTQNYLPPS
LQGYKFLN

Transcript Sequence

Transcript ID

VIT_03s0017g02320.t01
Transcript Infomation

cdna chromosome:12X:3:19131105:19133186:1 gene:VIT_03s0017g02320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACACATGTCATATTTTTATTAGGGTAAAATGTGGGTAGGTACCCCAAAATGAAAGAGTG
GGTACCATAGAACAACTCATAAAACATACGAAAGGTCGCAAATTAGACTTGGGAAGTCCC
GCCACCGGCTGATAGCGTCGCCTAGGTGCAAACCAGAGTTGCAGTTGAGGAGCGAAGGGA
AATGGAGAGGGAGCAGTTGCTGAGCATGGGTTTTCCTGACGATTTGGCCTCCCAAGCTCT
CGCTGCCACAGGTGGCAAATCGATCCTCAAAGCCACCGAATGGATTCTTGGCCGCAACAA
ATCCGATTCTCAAACCCCTGACGAAAACCCCAATTCATCCCCATCCCCATCCCCATTCCA
GCCCAAGCTCGATCGCTTCTTTCACTTTCAATCCAAGCCCTCCAATCCCCCCCAAATCCA
AAAACAACACTGCGACACGCCCTCACTGCCCAGTCCCCCCTCCAAACGACTCCGTTTAGA
GGCAGAAAACAGTCCCCACCAGCCCTTATCTGAGCGAATGCGACCTCGTACTGTGGACGA
TGTGGTGGGCCAAGACCATCTTCTCTCTCACAAATCCCTGCTTCGCTCGGCCATCGATTC
CAACCGTCTTCCTTCTATAATCCTATGGGGCCCACCGGGCACCGGCAAGACCTCCATTGC
CAAGGCCATTGTCAATTCCTCCTCCCAGCCTTCCTCCTATCGATTTGTTTCCTTATCGGC
TGTCACTGCTGGTGTCAAGGACGTGAGGGACGTCGTGGAGGAGGCTAGAAAGATTAAAGT
GTCAAAGAACATGAACAGCAAGAGAACATTGTTGTTTGTGGATGAGGTTCATCGTTTCAA
CAAGTCTCAACAAGACTCTTTTTTGCCTGTAATTGAAGATGGGAGCATCGTGTTTATTGG
AGCTACAACCGAGAATCCATCATTCCATTTGATAACGCCCTTGTTGTCTCGCTGTCGAGT
TCTCACCCTCAACCCTTTACAGCCTAGTCATGTTGCTAGCCTGCTTAATCGAGCTGTTGC
TGACACGGGCAGGGGATTGGCTTGGAGCGTGGGTGGGGCGAGTATTGAAGTCAGCGATGA
TGCCATTGATTTTTTGTCCTCACATTGTGATGGCGATGCTCGTGTGGCATTAAACGCCTT
GGAAATTTCTGCTGTCACTGCAGCTGCTCGAGTACCCATTAAGCAATCAGTCTGCAAAGT
TGAAGAAAAAGAGCATGGAGAGAATTTAGTGGAAAATAATGGGGTTGGTTCATCCCAAGT
GACCACTGTCACTTTGGATGATGCCAAGGAGGCGCTGCAATCTAAGCATCTTGCTTATGA
CAAAGCAGGGGAAGAACACTACAATCTCATCAGTGCCCTCCACAAATCGATGAGGGGTAG
TGATGCGGATGCCTCAATTTATTGGCTGGCAAGAATGTTAGAAGGAGGTGAAGAACCTTT
GTATATTGCCAGGAGACTCATCAGGTTTGCAAGTGAGGATGTTGGATTGGCTGACCCCAT
TGCCCTTGTGCAGGCTGTTGCTTGCTGCCAAGCTTGCCATTTTTTGGGCATGCCTGAGTG
CAATGTGAATCTTGCACAATGTGTGGCTTACTTGGCTTTGGCTCCCAAATCTGTTTCTGT
GTATCGAGCCATTTTGGCTGCACAGGAGGTAGTGAGGGAATCTGTTGGACAGAATGAGGG
AGTGCCTCTTCATCTCAGGAATGCACCCACTAAACTAATGAAGGAACTTGGATACGGGAA
GGGCTATATCTACCCACCTGACAATCCTTCCTCTTCTACACAGAACTATCTACCACCATC
ACTTCAAGGTTACAAGTTTCTCAATTGAACAAATAATGGTAGGGGTGATGGATGAGAAGG
TCTTCTGACTGCAGTTGGGAGTGTTTGGTGCTTAGTGAGTAGGCATTCTTCCCTGTTTGT
TATCTCCTCCTTGGGTGTTTTACTGTGAAAAATATGATCCTTTTTGTCTATAGTTTTGTA
CCATTTTGTAGAGAGGGGATAAAATATGACCCTTTTTATCTCCTCCTTGGCTGCTTCTTC
TAGTGAGTACTCTTATACATGGAGAAAGGTTCAATTTTGGCT