Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g02170.t01
CDS Infomation

cds chromosome:12X:3:18921829:18923523:-1 gene:VIT_03s0017g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACAAGCTTCTGAGGTTACTGTTCATCCTCTTTCTCATAACTCTTCCAACACTGGTT
TTAGGAGACTGTACATGTGACAAAGACGATGGAGATCGAGACAAAAATAAAGCTCTTAGA
TATAAGATAGCAGCTATAATTGCCATACTGGCTGGTGGTGCAATTGGGGTGTGTATACCA
ATTCTAGGGAAGACGATACCGGCTCTTCACCCTGAAAAGAATGTATTCTTTATTATAAAG
GCGTTTGCAGCCGGAGTGATTCTGGCGACGGGGTTCATTCACGTACTTCCTGATGCTTTT
GAGAACTTAACCTCGCCCTGTCTCAGTGAGAACCCTTGGGGGAATTTTCCATTTACTGGC
TTTGTGGCGATGGTATCGGCCATTGGGACACTGATGGTGGATGCTTGTGCAACCTCTTAC
TATAGTAGGTCTCACTTCAAGAAGGCTCAGCAAGCTGTGGGAGATGAAGAGAAGGCTGGA
GAGCATGAAGGTCATGTTCATGTTCACACACATGGCACTCATGGCCATGCTCACGGATCT
GCATCTTCTGCTGAGGAAATGGGTTCTGCAGAACTCATCAGACATCGTGTGATTTCTCAG
GTTTTGGAATTGGGAATTGTGGTGCATTCTGTAATCATTGGAATATCATTAGGAGCATCT
GAGAGTCCAAAAACAATAAAGCCTCTGGTGGCTGCTCTCACCTTCCACCAATTTTTTGAA
GGCATGGGCCTTGGAGGTTGCATTGTTCAGGCCAAGTTTAAGCTTCGGGCTGCTGCAATT
ATGGCGCTGTTCTTCTCCCTAACAACCCCAGTTGGGATAGCGATTGGGATCGGGATATCG
AATGTTTATGACGAAAACAGTTCAACAGCACTCATAGTTGAAGGGATTTTCAATGCTGCA
TCGGCCGGAATCTTGGTATATATGGCGCTGGTGGATCTTCTAGCAGCGGATTTCATGAAC
CCAAGGATGCAGGGTAATGGAAGGCTTCAAGTTGGGGCCAATATTTCACTTCTCGTTGGG
GCTGGTTGCATGTCCCTCCTGGCCAAATGGGCTTAA

Peptide Sequence

PEP ID

VIT_03s0017g02170.t01
PEP Infomation

pep chromosome:12X:3:18921829:18923523:-1 gene:VIT_03s0017g02170 transcript:VIT_03s0017g02170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDKLLRLLFILFLITLPTLVLGDCTCDKDDGDRDKNKALRYKIAAIIAILAGGAIGVCIP
ILGKTIPALHPEKNVFFIIKAFAAGVILATGFIHVLPDAFENLTSPCLSENPWGNFPFTG
FVAMVSAIGTLMVDACATSYYSRSHFKKAQQAVGDEEKAGEHEGHVHVHTHGTHGHAHGS
ASSAEEMGSAELIRHRVISQVLELGIVVHSVIIGISLGASESPKTIKPLVAALTFHQFFE
GMGLGGCIVQAKFKLRAAAIMALFFSLTTPVGIAIGIGISNVYDENSSTALIVEGIFNAA
SAGILVYMALVDLLAADFMNPRMQGNGRLQVGANISLLVGAGCMSLLAKWA

Transcript Sequence

Transcript ID

VIT_03s0017g02170.t01
Transcript Infomation

cdna chromosome:12X:3:18921829:18923523:-1 gene:VIT_03s0017g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGCACTCCATCTTTCACCCCATTTTCTCTTCTCCTCCTCATAATCAGTAGTTTTTTCATT
GCCATGGACAAGCTTCTGAGGTTACTGTTCATCCTCTTTCTCATAACTCTTCCAACACTG
GTTTTAGGAGACTGTACATGTGACAAAGACGATGGAGATCGAGACAAAAATAAAGCTCTT
AGATATAAGATAGCAGCTATAATTGCCATACTGGCTGGTGGTGCAATTGGGGTGTGTATA
CCAATTCTAGGGAAGACGATACCGGCTCTTCACCCTGAAAAGAATGTATTCTTTATTATA
AAGGCGTTTGCAGCCGGAGTGATTCTGGCGACGGGGTTCATTCACGTACTTCCTGATGCT
TTTGAGAACTTAACCTCGCCCTGTCTCAGTGAGAACCCTTGGGGGAATTTTCCATTTACT
GGCTTTGTGGCGATGGTATCGGCCATTGGGACACTGATGGTGGATGCTTGTGCAACCTCT
TACTATAGTAGGTCTCACTTCAAGAAGGCTCAGCAAGCTGTGGGAGATGAAGAGAAGGCT
GGAGAGCATGAAGGTCATGTTCATGTTCACACACATGGCACTCATGGCCATGCTCACGGA
TCTGCATCTTCTGCTGAGGAAATGGGTTCTGCAGAACTCATCAGACATCGTGTGATTTCT
CAGGTTTTGGAATTGGGAATTGTGGTGCATTCTGTAATCATTGGAATATCATTAGGAGCA
TCTGAGAGTCCAAAAACAATAAAGCCTCTGGTGGCTGCTCTCACCTTCCACCAATTTTTT
GAAGGCATGGGCCTTGGAGGTTGCATTGTTCAGGCCAAGTTTAAGCTTCGGGCTGCTGCA
ATTATGGCGCTGTTCTTCTCCCTAACAACCCCAGTTGGGATAGCGATTGGGATCGGGATA
TCGAATGTTTATGACGAAAACAGTTCAACAGCACTCATAGTTGAAGGGATTTTCAATGCT
GCATCGGCCGGAATCTTGGTATATATGGCGCTGGTGGATCTTCTAGCAGCGGATTTCATG
AACCCAAGGATGCAGGGTAATGGAAGGCTTCAAGTTGGGGCCAATATTTCACTTCTCGTT
GGGGCTGGTTGCATGTCCCTCCTGGCCAAATGGGCTTAAACCTCACCTCTAGAATGGTAA
AATATAAAATTTGAGTAGAGCAATATTTTCTTGTGATATCACCATGTAAAATATGATTAC
ACATAGTTTTTTTTGTTTTTTTTTGAGTAATTTCTTAGCAACTTCAAGCGTCTCTATCTT
TAATTTTATGTGGACATTATGGGTTGGGATTTCCCAATTTAGGCCCACACTTGTTTAGAC
AAAAATAAAGTTCCTTTT