Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g01930.t01
CDS Infomation

cds chromosome:12X:3:18343214:18371376:-1 gene:VIT_03s0017g01930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACATGTGTGTTGTTGCAGCATTTTCATGTGAGTGATAGCTGTTTCTCAAGAACC
CCTTATTTGCAGTCTTCTAGAACTTCTCAGCTTTCGAAGCTCAGGCCTGGTGGGTCTTCA
ATCAGATGCCAATCCACTAGCACGGATAAACAGAAATCAAGAAATCTATTGGACAATGCG
AGCAACCTCCTAACCAATTTTTTAAGTGGGGGAAGTATAGGGTCAATGCCTGTAGCTGAA
GGTGCAGTTTCTGATCTTTTTGGTCGGCCTCTCTTCTTTTCACTGTATGATTGGTTCATA
GAGCATGGCTCAGTGTATAAACTTGCTTTTGGGCCAAAGGCATTTGTTGTTGTGTCAGAT
CCCATTGTTGCAAGGCATATTCTTCGAGAAAATATCTTTGGTTATGACAAGGGAGTTCTT
GCTGATATACTAGAACCAATAATGGGGAAAGGACTCATACCTGCTGACCTTGACACCTGG
AAGCAAAGGAGAAGAGTTATTGCTCCTGGGTTCCATGCTTTATACTTGGAAGCTATGACA
AAAGTATTTACTGAGTGTTCAGAAAGAGCAATATTGAAATTTGAGAAGCTTCTAGAAGGA
GAGCACTTGCATGGGGGAAAGACAATTGAGTTGGATCTTGAAGCTGAGTTTTCAAATTTG
GCACTTGACATTATTGGGCTTGGTGTCTTTAACTATGATTTTGGATCTGTCACGAAAGAA
TCTCCAGTGATAAAGGCAGTATATGGTACTCTTTTTGAAGCTGAGCATAGATCGACCTTC
TACATCCCTTATTGGAAAGTTCCTTTGGCAAGATGGATAGTACCAAGGCAGCGAAAGTTC
CACAGTGACCTAAAGGTTATTAATGACTGTCTTGATGGACTCATCAAAAATGCAAAAGAG
ACTAGACAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGACTACCAAAATCTTAAGGAT
GCAAGTCTTTTGCGGTTTTTAGTTGATATGCGAGGAGCTGATGTGGACGACCGTCAGCTA
AGAGATGACCTGATGACAATGCTTATCGCTGGCCATGAAACAACTGCTGCTGTTCTCACT
TGGGCTGTTTTCCTACTCGCACAAAATCCCTCCAAGATGAAAAAAGCTCAAGCTGAGATT
GATTCAGTTCTTGGTCAGGGCAGAATATCCTTTGAATCACTAAAAAAATTGGAGTACATA
AGACTCATTGTTGCAGAGTCTCTCCGTTTGTATCCTCAGCCCCCATTACTGATCAGACGT
TCCCTCAAGTCAGATGCATTACCAGGTGGATACAAGGGTAAAAAGGACGGCCACTCAATT
CCTGCTGGGACTGATATCTTTCTTTCAGTATATAACCTCCATCGGTCCCCATACTTCTGG
GATCGCCCCCATGAATTTGAACCAGAGAGGTTCCTAGTACCAAGGAACAGCGACATTGAA
GGATGGTCCGGCTTTGATCCATCACGGAGCCCTGGAGCGTTGTACCCCAATGAGATTGTT
GCAGACTTCGCCTTCTTACCCTTTGGTGGAGGGCCGAGAAAATGTGTGGGAGACCAATTT
GCACTCATGGAGTCGACCATTGCATTGACCATGTTGCTGCAGAAATTTGATGTTGAGCTG
AAAGGAGGTCCAGAATCTGTGGAGTTGGTCACAGGAGCAACAATCCATACCAAGAATGGC
CTTTGGTGCAGGATGATGAAGAGGTCTGATCTTCATTAG

Peptide Sequence

PEP ID

VIT_03s0017g01930.t01
PEP Infomation

pep chromosome:12X:3:18343214:18371376:-1 gene:VIT_03s0017g01930 transcript:VIT_03s0017g01930.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATCVLLQHFHVSDSCFSRTPYLQSSRTSQLSKLRPGGSSIRCQSTSTDKQKSRNLLDNA
SNLLTNFLSGGSIGSMPVAEGAVSDLFGRPLFFSLYDWFIEHGSVYKLAFGPKAFVVVSD
PIVARHILRENIFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMT
KVFTECSERAILKFEKLLEGEHLHGGKTIELDLEAEFSNLALDIIGLGVFNYDFGSVTKE
SPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIKNAKE
TRQETDVEKLQQRDYQNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLT
WAVFLLAQNPSKMKKAQAEIDSVLGQGRISFESLKKLEYIRLIVAESLRLYPQPPLLIRR
SLKSDALPGGYKGKKDGHSIPAGTDIFLSVYNLHRSPYFWDRPHEFEPERFLVPRNSDIE
GWSGFDPSRSPGALYPNEIVADFAFLPFGGGPRKCVGDQFALMESTIALTMLLQKFDVEL
KGGPESVELVTGATIHTKNGLWCRMMKRSDLH

Transcript Sequence

Transcript ID

VIT_03s0017g01930.t01
Transcript Infomation

cdna chromosome:12X:3:18343214:18371376:-1 gene:VIT_03s0017g01930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGAGTTGGGCAATGGCTACATGTGTGTTGTTGCAGCATTTTCATGTGAGTGATAGCTGT
TTCTCAAGAACCCCTTATTTGCAGTCTTCTAGAACTTCTCAGCTTTCGAAGCTCAGGCCT
GGTGGGTCTTCAATCAGATGCCAATCCACTAGCACGGATAAACAGAAATCAAGAAATCTA
TTGGACAATGCGAGCAACCTCCTAACCAATTTTTTAAGTGGGGGAAGTATAGGGTCAATG
CCTGTAGCTGAAGGTGCAGTTTCTGATCTTTTTGGTCGGCCTCTCTTCTTTTCACTGTAT
GATTGGTTCATAGAGCATGGCTCAGTGTATAAACTTGCTTTTGGGCCAAAGGCATTTGTT
GTTGTGTCAGATCCCATTGTTGCAAGGCATATTCTTCGAGAAAATATCTTTGGTTATGAC
AAGGGAGTTCTTGCTGATATACTAGAACCAATAATGGGGAAAGGACTCATACCTGCTGAC
CTTGACACCTGGAAGCAAAGGAGAAGAGTTATTGCTCCTGGGTTCCATGCTTTATACTTG
GAAGCTATGACAAAAGTATTTACTGAGTGTTCAGAAAGAGCAATATTGAAATTTGAGAAG
CTTCTAGAAGGAGAGCACTTGCATGGGGGAAAGACAATTGAGTTGGATCTTGAAGCTGAG
TTTTCAAATTTGGCACTTGACATTATTGGGCTTGGTGTCTTTAACTATGATTTTGGATCT
GTCACGAAAGAATCTCCAGTGATAAAGGCAGTATATGGTACTCTTTTTGAAGCTGAGCAT
AGATCGACCTTCTACATCCCTTATTGGAAAGTTCCTTTGGCAAGATGGATAGTACCAAGG
CAGCGAAAGTTCCACAGTGACCTAAAGGTTATTAATGACTGTCTTGATGGACTCATCAAA
AATGCAAAAGAGACTAGACAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGACTACCAA
AATCTTAAGGATGCAAGTCTTTTGCGGTTTTTAGTTGATATGCGAGGAGCTGATGTGGAC
GACCGTCAGCTAAGAGATGACCTGATGACAATGCTTATCGCTGGCCATGAAACAACTGCT
GCTGTTCTCACTTGGGCTGTTTTCCTACTCGCACAAAATCCCTCCAAGATGAAAAAAGCT
CAAGCTGAGATTGATTCAGTTCTTGGTCAGGGCAGAATATCCTTTGAATCACTAAAAAAA
TTGGAGTACATAAGACTCATTGTTGCAGAGTCTCTCCGTTTGTATCCTCAGCCCCCATTA
CTGATCAGACGTTCCCTCAAGTCAGATGCATTACCAGGTGGATACAAGGGTAAAAAGGAC
GGCCACTCAATTCCTGCTGGGACTGATATCTTTCTTTCAGTATATAACCTCCATCGGTCC
CCATACTTCTGGGATCGCCCCCATGAATTTGAACCAGAGAGGTTCCTAGTACCAAGGAAC
AGCGACATTGAAGGATGGTCCGGCTTTGATCCATCACGGAGCCCTGGAGCGTTGTACCCC
AATGAGATTGTTGCAGACTTCGCCTTCTTACCCTTTGGTGGAGGGCCGAGAAAATGTGTG
GGAGACCAATTTGCACTCATGGAGTCGACCATTGCATTGACCATGTTGCTGCAGAAATTT
GATGTTGAGCTGAAAGGAGGTCCAGAATCTGTGGAGTTGGTCACAGGAGCAACAATCCAT
ACCAAGAATGGCCTTTGGTGCAGGATGATGAAGAGGTCTGATCTTCATTAGAACACAAGA
GGTTACATTGAGTAAAATAATTGAATGACGTATGATTTCCTTATCAATGAGCTGCGTCCG
TGTTTTGAACATTGGAATAGGGAATGAGAATGGAAAAATCTCAAAATCATTCTGTTTCTC
ATCGATAACTCT