Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g01810.t01
CDS Infomation

cds chromosome:12X:3:17992305:17996379:-1 gene:VIT_03s0017g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGATGCTGTAGATGGAGGGCATGATAGGGATGGAAAGATTCTTAATTCCCCTAAA
ATGGATGTTATACGGGCTGAAGGGGACACTGATTTTGAGCCACGTAATGGCATTGAATTT
GAATCACACGAGGCAGCATATTCATTTTATCAAGAGTATGCCAAGTCTATGGGATTCACC
ACCTCGATAAAAAACAGTCGGCGCTCAAAGAAATCAAAAGAATTTATTGATGCCAAATTT
GCATGTTCTAGATATGGGGTCACTCCAGAATCAGATAGTGGTAGTAGTAGCCGACGGCCA
AGTGTAAAGAAGACAGACTGCAAAGCCAGCATGCATGTGAAGAGAAGGCTAGATGGGAAA
TGGGTAATTCATGAGTTTATAAAGGAGCATAATCATGAGCTTTTACCAGCTCTAGCATAT
CATTTTCGAATTCATAGGAATGTAAAGTTAGCTGAAAAGAATAATATTGACATTTTACAA
GCTGTAAGTGAACGGACAAGAAAGATGTATGTTGAAATGTCTAGACAATGTGGTGGGTAT
CGAGATGTTGGGTTTCTTAGGAATGAAATACCTTCTCAGTTTGATAAAGGGCGGTACCTG
GCTCTAGATGAGGGGGATGCCCAAGTCATACTTGAGTATTTTAAGCACATCCAGAAGGAT
AATCCTAACTTCTTCTATGCATTAGACCTGAATGAAGAGCAGCGCCTAAGAAATTTGTTT
TGGGTTGATGCCAAAAGTAGGAATGACTACATCCATTTCAGTGATGTTGTATCATTTGAT
ACTACTTATGTAAAAAGCAACGATAAAATGCCATTTGCGCTTTTTATTGGGGCAAACCAT
CACTTCCAATCCATGTTGCTTGGATGTGCGTTGATTGCGGATGAGACCAAACCAACATTC
GTTTGGTTAATGAAAACTTGGCTTAGAGCAATGGGTGGGCAGGCTCCTAAAGTGATAATA
ACTGATCAAGACAGAACTTTGAAGGCAGCTACTGAAGAAGTCTTTCCAAATGCACGTCAT
TGCTTTGCTCTTTGGCATGTATTGGAAAAAATCCCTGAAGTTCTCACTCCTGTAATCAAA
CGACATGAAAATTTTATGGCAAAATTCAACAAGTGCATTTTTAAGTCATGGACAGATGAA
CAGTTTGATATGAGATGGTGGAAAATGGTCAGTAGGTTTGAACTTCAAGAGGATGGATGG
TTTCAGTTTTTATATGAAGATCGTAAAAAGTGGGTACCAACTTTTATGGGGGATACTTTT
TTGGCAGGCATGTCTACAGCTCAGCGCTCTGAAAGTATAAACTCTTTCTTCGACAAATAC
ATTCATAAGAAAATTACCCTGAAAGAGTTTGTGAAGCAGTATGGATTAATTCTACAAAAT
AGGTATGAAGAGGAAGCAATAGCAGATTTCGATACATGGCACAAACAGCCTGCATTGAAA
TCTCCTTCACCCTGGGAAAAACAGATGTCAACTGTTTACACACATGCAATATTCAAGAAA
TTCCAAGTTGAGGTTTTGGGTGTAGTTGGGTGCCATCCCAGCAGAGAAATTGAAGATGGA
GCGAATATGACATTTAGAGTTGTGGACTGTGAAAAGAACGAAACTTTTATGGTGTCATGG
AAAGAAGTGAAGGCAGAGGTTTCTTGTTTATGTCGTTCTTTTGAATACAAAGGCTTTCTT
TGTAGACATGCAATGATTGTTCTCCAAATTTGTGGCCTTTCTAGTATCCCAACTCAGTAT
ATTCTAAAGAGGTGGACAAAAGATGCAAAGAACCAGCCATCAACAGTTGAAGGAACGGAA
CGCATACAAACTAGGGTGCAACGTTACAATGATTTATGTAAACGAGCCATTGAGTTGGGT
GAAGAAGGATCTTTGTCTCAAGAGAGCTACAGTATTGCATTCCGAACGCTGGTAGAAGCC
CTGAAAAATTGTGTGAATGTGAATAATTCAAATAAAAGTGCTGTAGAATTTATCAGCAAT
GCTCATGGTCCTCGTGACATGGAAGAAGAGAATCAGGGAAGCCTTGGAACCAAAACAAGT
AAGAAGAAGATGGCAAGCAGGAAAAGGAAGGGACAATCAGAGCCTGGTGTTATAATTCCT
GAGGCACAAGATAGCTTGCAGCAAATGGGAAATCTAAGCTCAGATGGAATAACTCTTAAT
GGCTTTTATGGATCCCAACAGAATGTGCAAGGACTGGTGCAATTGAACTTAATGGAGCCT
CCTCATGATGGTTACTATGTTAATCAGCAGGGCATGCAGGGGCTGGGACAACTAAATGCA
GTAGCACCCAATCATGACGGGTTCTTTGGGACTCAACCAAGCATGCATGGCCTGGGGCAT
CTGGATTTTCGACCACCAACTAGCTTTGGTTACAGCATGCAGGATGAGCACAGCCTGAGA
TCCACACAGTTGCATGGAGATGCTTCAAGACATGCATGA

Peptide Sequence

PEP ID

VIT_03s0017g01810.t01
PEP Infomation

pep chromosome:12X:3:17992305:17996379:-1 gene:VIT_03s0017g01810 transcript:VIT_03s0017g01810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVDAVDGGHDRDGKILNSPKMDVIRAEGDTDFEPRNGIEFESHEAAYSFYQEYAKSMGFT
TSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSGSSSRRPSVKKTDCKASMHVKRRLDGK
WVIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILQAVSERTRKMYVEMSRQCGGY
RDVGFLRNEIPSQFDKGRYLALDEGDAQVILEYFKHIQKDNPNFFYALDLNEEQRLRNLF
WVDAKSRNDYIHFSDVVSFDTTYVKSNDKMPFALFIGANHHFQSMLLGCALIADETKPTF
VWLMKTWLRAMGGQAPKVIITDQDRTLKAATEEVFPNARHCFALWHVLEKIPEVLTPVIK
RHENFMAKFNKCIFKSWTDEQFDMRWWKMVSRFELQEDGWFQFLYEDRKKWVPTFMGDTF
LAGMSTAQRSESINSFFDKYIHKKITLKEFVKQYGLILQNRYEEEAIADFDTWHKQPALK
SPSPWEKQMSTVYTHAIFKKFQVEVLGVVGCHPSREIEDGANMTFRVVDCEKNETFMVSW
KEVKAEVSCLCRSFEYKGFLCRHAMIVLQICGLSSIPTQYILKRWTKDAKNQPSTVEGTE
RIQTRVQRYNDLCKRAIELGEEGSLSQESYSIAFRTLVEALKNCVNVNNSNKSAVEFISN
AHGPRDMEEENQGSLGTKTSKKKMASRKRKGQSEPGVIIPEAQDSLQQMGNLSSDGITLN
GFYGSQQNVQGLVQLNLMEPPHDGYYVNQQGMQGLGQLNAVAPNHDGFFGTQPSMHGLGH
LDFRPPTSFGYSMQDEHSLRSTQLHGDASRHA

Transcript Sequence

Transcript ID

VIT_03s0017g01810.t01
Transcript Infomation

cdna chromosome:12X:3:17992305:17996379:-1 gene:VIT_03s0017g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGGAAAATGTGAATAGTATTGGAGTGGGCAGAAATATGGTTGATGCTGTAGATGGAGG
GCATGATAGGGATGGAAAGATTCTTAATTCCCCTAAAATGGATGTTATACGGGCTGAAGG
GGACACTGATTTTGAGCCACGTAATGGCATTGAATTTGAATCACACGAGGCAGCATATTC
ATTTTATCAAGAGTATGCCAAGTCTATGGGATTCACCACCTCGATAAAAAACAGTCGGCG
CTCAAAGAAATCAAAAGAATTTATTGATGCCAAATTTGCATGTTCTAGATATGGGGTCAC
TCCAGAATCAGATAGTGGTAGTAGTAGCCGACGGCCAAGTGTAAAGAAGACAGACTGCAA
AGCCAGCATGCATGTGAAGAGAAGGCTAGATGGGAAATGGGTAATTCATGAGTTTATAAA
GGAGCATAATCATGAGCTTTTACCAGCTCTAGCATATCATTTTCGAATTCATAGGAATGT
AAAGTTAGCTGAAAAGAATAATATTGACATTTTACAAGCTGTAAGTGAACGGACAAGAAA
GATGTATGTTGAAATGTCTAGACAATGTGGTGGGTATCGAGATGTTGGGTTTCTTAGGAA
TGAAATACCTTCTCAGTTTGATAAAGGGCGGTACCTGGCTCTAGATGAGGGGGATGCCCA
AGTCATACTTGAGTATTTTAAGCACATCCAGAAGGATAATCCTAACTTCTTCTATGCATT
AGACCTGAATGAAGAGCAGCGCCTAAGAAATTTGTTTTGGGTTGATGCCAAAAGTAGGAA
TGACTACATCCATTTCAGTGATGTTGTATCATTTGATACTACTTATGTAAAAAGCAACGA
TAAAATGCCATTTGCGCTTTTTATTGGGGCAAACCATCACTTCCAATCCATGTTGCTTGG
ATGTGCGTTGATTGCGGATGAGACCAAACCAACATTCGTTTGGTTAATGAAAACTTGGCT
TAGAGCAATGGGTGGGCAGGCTCCTAAAGTGATAATAACTGATCAAGACAGAACTTTGAA
GGCAGCTACTGAAGAAGTCTTTCCAAATGCACGTCATTGCTTTGCTCTTTGGCATGTATT
GGAAAAAATCCCTGAAGTTCTCACTCCTGTAATCAAACGACATGAAAATTTTATGGCAAA
ATTCAACAAGTGCATTTTTAAGTCATGGACAGATGAACAGTTTGATATGAGATGGTGGAA
AATGGTCAGTAGGTTTGAACTTCAAGAGGATGGATGGTTTCAGTTTTTATATGAAGATCG
TAAAAAGTGGGTACCAACTTTTATGGGGGATACTTTTTTGGCAGGCATGTCTACAGCTCA
GCGCTCTGAAAGTATAAACTCTTTCTTCGACAAATACATTCATAAGAAAATTACCCTGAA
AGAGTTTGTGAAGCAGTATGGATTAATTCTACAAAATAGGTATGAAGAGGAAGCAATAGC
AGATTTCGATACATGGCACAAACAGCCTGCATTGAAATCTCCTTCACCCTGGGAAAAACA
GATGTCAACTGTTTACACACATGCAATATTCAAGAAATTCCAAGTTGAGGTTTTGGGTGT
AGTTGGGTGCCATCCCAGCAGAGAAATTGAAGATGGAGCGAATATGACATTTAGAGTTGT
GGACTGTGAAAAGAACGAAACTTTTATGGTGTCATGGAAAGAAGTGAAGGCAGAGGTTTC
TTGTTTATGTCGTTCTTTTGAATACAAAGGCTTTCTTTGTAGACATGCAATGATTGTTCT
CCAAATTTGTGGCCTTTCTAGTATCCCAACTCAGTATATTCTAAAGAGGTGGACAAAAGA
TGCAAAGAACCAGCCATCAACAGTTGAAGGAACGGAACGCATACAAACTAGGGTGCAACG
TTACAATGATTTATGTAAACGAGCCATTGAGTTGGGTGAAGAAGGATCTTTGTCTCAAGA
GAGCTACAGTATTGCATTCCGAACGCTGGTAGAAGCCCTGAAAAATTGTGTGAATGTGAA
TAATTCAAATAAAAGTGCTGTAGAATTTATCAGCAATGCTCATGGTCCTCGTGACATGGA
AGAAGAGAATCAGGGAAGCCTTGGAACCAAAACAAGTAAGAAGAAGATGGCAAGCAGGAA
AAGGAAGGGACAATCAGAGCCTGGTGTTATAATTCCTGAGGCACAAGATAGCTTGCAGCA
AATGGGAAATCTAAGCTCAGATGGAATAACTCTTAATGGCTTTTATGGATCCCAACAGAA
TGTGCAAGGACTGGTGCAATTGAACTTAATGGAGCCTCCTCATGATGGTTACTATGTTAA
TCAGCAGGGCATGCAGGGGCTGGGACAACTAAATGCAGTAGCACCCAATCATGACGGGTT
CTTTGGGACTCAACCAAGCATGCATGGCCTGGGGCATCTGGATTTTCGACCACCAACTAG
CTTTGGTTACAGCATGCAGGATGAGCACAGCCTGAGATCCACACAGTTGCATGGAGATGC
TTCAAGACATGCATGAAGATAAACTGCACCTCCCAATAACCTGAACAACAGCAGTTGGCC
CCCCTAAAGACAGCAACAGCAATCAGAAAGCAATCTGGGTTGATCTTGGTCATGGTTTCA
GGATCCTCGACTGCTCTTTTTCCCAGAGCAGAAGAATATCCTTACCTTCCCTTTGTTGTA
TTGCCTAATTCTTGAACTGGGAAGTTGCTTATAGCCCTATACTGTTATAGACACTAATGC
TTCTTTGGCATGTGATGACTGATGAGATAGGAGATGGATCTGTTGGGGGGAAAATCATTA
AAATTTGAACATTTCCTTTGTACTTAAAGATGTGAAAAGAGTTGCTGCAATAATACCTCT
GT