Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g01780.t01
CDS Infomation

cds chromosome:12X:3:17962963:17966611:1 gene:VIT_03s0017g01780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATATAGATCTTAGATTACCTTCTGGTGAACATGATAAGGAAGATGAAGAAACAAAT
GGAATTGATACTATGTTGAATGGTGAAGACAAACTACATCATGGAGATGGAGAGACTGGA
ACTATGGTGGACGTTGGAGGTGAGGTACATGGTGAAGATGGAGGGGACATGAATTCTCTC
AATGCAGATCTTGTAGTGTTTAAAGAGGATACGAATCTTGAGCCACTTTCTGGTATGGAA
TTTGAATCACATGGTGAGGCCTATTCTTTTTATCAAGAATATGCTAGGTCTATGGGATTC
AGCACTGCAATACAAAATAGCCGTCGTTCAAAGACATCAAGGGAATTTATTGATGCAAAA
TTTGCCTGTTCTAGATATGGGACCAAGCGAGAGTATGACAAATCTTATAATCGACCACGT
GCCAGACAAAACAAGCAAGACCCAGAAAATGCAACAGGTCGACGATCATGTGCAAAGACA
GACTGCAAAGCAAGCATGCATGTTAAGAGGAGATCAGATGGAAAATGGGTTATACACAGT
TTTGTGAAGGAGCATAACCATGAACTCTTACCAGCTCAAGCAGTCAGTGAACAAACGAGA
AAGATGTATGCGGCGATGGCTAGACAATTCGCTGAATATAAGAGTGTGGTTGGTCTCAAG
AATGACTCCAAAAGTCCATTTGATAAGAGTCGGAATCTGGCACTAGAACCAGGAGATGCA
AAAGTTTTGCTCGAATTTTTTACACAGATGCAGCATGTAAATTCCAACTTCTTTTATGCA
ATAGATCTGGCTGAAGATCAACGTCTGAAAAATCTGTTCTGGGTTGATGCCAAAAGCAGG
CATGATTATATCAATTTCTCTGATGTCGTTTCTTTTGACACTACCTATATTAGGAATAAG
TATAAAATGCCTCTTGCTCTTTTTATTGGAGTGAATCAACATTATCAATTTGTGTTGCTT
GGATGTGCGTTAATATCAGATGAGAGCGCAGCAACATTTTCTTGGTTAATGCAGACATGG
CTGAAGGCAATGGGTGGACAATCTCCCAAAGTAATAATTACTGACCAAGACAAAGGCATG
AAATCAGCTATTTCGGAGGTTTTTCCAAATGCTTATCATGCCTTTTTCTTGTGGCACATT
TTGGGGAAGGTTTCTGAAAGTCTTGGGCAGGTTATTAAACAGCATGAAAATTTTATGGCA
AAATTTGAAAAATGCATTTACAGGTCATGGACAGAGGAAGAGTTTGAAAACAGATGGTGT
AAAATTCTTGATAGATTTGAACTCAAAGAGGATGAATGGATGCAGTCGTTGTATGAAGAT
CGTAAACAATGGGTGCCAACCTTCATGAAGGATGCCTTTTTAGCTGGAATGTCTACAGTT
CAGCGATCTGAAAGTGTTAATGCTTTCTTTGACAAATACGTGCATAAGAAAACTACAGTG
CAAGAGTTTGTGAAACTCTATGAAGCAATTCTACAAGATAGATATGAGGACGAAGCCAAA
GCAGATTCTGATACTTGGAACAAACAACCTGCTTTAAAATCTCCATCGCCTTTGGAGAAG
CATATGTCAAGGTTGTACACACATGCAGTATTTAAGAAATTCCAAGGTGAGGTTTTGGGT
GCGGTTGCTTGTCATCCTAAAAGAGAAAGACAAGACGACACAACCATAACTTTCAGAGTT
CAAGATTTTGAGAAGAATCAAGACTTCATTGTAACATGGAATGATATGAAGTCGGAAGTT
TCTTGTATATGCCGGTTATTTGAATATAAAGGTTTTCTTTGTAGACATGCAATGATAGTT
CTCCAAATTTGTGGCCTTTCAGACATTCCATCTCAATATATCCTGAAACGTTGGACGAAA
GATGCAAAGAGCAGGCACTTACTGGGAGAAGAATCTGAACAGGTGCAATCTAGGTCGCAG
CGATACAATGACTTATGTCAACGAGCTATGAAATTGGGTGAAGAGGGATCATTATCCCAA
GAGAGTTATGATATTGCATTCCGTGTGCTAGAAGAAGCTTTTGTAAATTGTGTTAATGTG
AATAACTCTAGTAAGAGTCTTATAGAAGCTGGCACATCAGGCGCTCATGGGCTCCTCTGC
ATTGAAGATGATAACCAAAGTAGAAATATGAGCAAGACAAATAAGAAAAAGAATCCAACC
AAGAAAAGAAAGGTACCCACTGAGCCAGAAGTTTTGGCTGTTGCAGCGTCAGACAGCTTG
CAACAAATGGACAAATTAAATTCTAGAGCAGTAACCCTTGACAGCTACTATGGTGCGCAA
CAGAGTGTCCAAGGAATGGTACAACTTAACTTAATGGCACCTAATCGTGACAATTACTAT
GGGAATCAGCAGACAATTCAGGGCCTGGGGCAACTAAACTCAATAGCACCAAGTCATGAT
GGTTATTATGGCGCTCAGCAAAGCATTCATGGACTGGGGCAGATGGATTTTTTCCGAACA
CCAACTAGTTTTGCTTATGCCATTCGGGATGAGCCTAATGTGAGATCCGCGCAGTTGCAC
GATGATGCACCAAGACATGCATGA

Peptide Sequence

PEP ID

VIT_03s0017g01780.t01
PEP Infomation

pep chromosome:12X:3:17962963:17966611:1 gene:VIT_03s0017g01780 transcript:VIT_03s0017g01780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDIDLRLPSGEHDKEDEETNGIDTMLNGEDKLHHGDGETGTMVDVGGEVHGEDGGDMNSL
NADLVVFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFSTAIQNSRRSKTSREFIDAK
FACSRYGTKREYDKSYNRPRARQNKQDPENATGRRSCAKTDCKASMHVKRRSDGKWVIHS
FVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKSVVGLKNDSKSPFDKSRNLALEPGDA
KVLLEFFTQMQHVNSNFFYAIDLAEDQRLKNLFWVDAKSRHDYINFSDVVSFDTTYIRNK
YKMPLALFIGVNQHYQFVLLGCALISDESAATFSWLMQTWLKAMGGQSPKVIITDQDKGM
KSAISEVFPNAYHAFFLWHILGKVSESLGQVIKQHENFMAKFEKCIYRSWTEEEFENRWC
KILDRFELKEDEWMQSLYEDRKQWVPTFMKDAFLAGMSTVQRSESVNAFFDKYVHKKTTV
QEFVKLYEAILQDRYEDEAKADSDTWNKQPALKSPSPLEKHMSRLYTHAVFKKFQGEVLG
AVACHPKRERQDDTTITFRVQDFEKNQDFIVTWNDMKSEVSCICRLFEYKGFLCRHAMIV
LQICGLSDIPSQYILKRWTKDAKSRHLLGEESEQVQSRSQRYNDLCQRAMKLGEEGSLSQ
ESYDIAFRVLEEAFVNCVNVNNSSKSLIEAGTSGAHGLLCIEDDNQSRNMSKTNKKKNPT
KKRKVPTEPEVLAVAASDSLQQMDKLNSRAVTLDSYYGAQQSVQGMVQLNLMAPNRDNYY
GNQQTIQGLGQLNSIAPSHDGYYGAQQSIHGLGQMDFFRTPTSFAYAIRDEPNVRSAQLH
DDAPRHA

Transcript Sequence

Transcript ID

VIT_03s0017g01780.t01
Transcript Infomation

cdna chromosome:12X:3:17962963:17966611:1 gene:VIT_03s0017g01780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGGTATCCTTGAAAAAGGATTTACTGGACATAAAAATATACTCTCATCATGGATATAG
ATCTTAGATTACCTTCTGGTGAACATGATAAGGAAGATGAAGAAACAAATGGAATTGATA
CTATGTTGAATGGTGAAGACAAACTACATCATGGAGATGGAGAGACTGGAACTATGGTGG
ACGTTGGAGGTGAGGTACATGGTGAAGATGGAGGGGACATGAATTCTCTCAATGCAGATC
TTGTAGTGTTTAAAGAGGATACGAATCTTGAGCCACTTTCTGGTATGGAATTTGAATCAC
ATGGTGAGGCCTATTCTTTTTATCAAGAATATGCTAGGTCTATGGGATTCAGCACTGCAA
TACAAAATAGCCGTCGTTCAAAGACATCAAGGGAATTTATTGATGCAAAATTTGCCTGTT
CTAGATATGGGACCAAGCGAGAGTATGACAAATCTTATAATCGACCACGTGCCAGACAAA
ACAAGCAAGACCCAGAAAATGCAACAGGTCGACGATCATGTGCAAAGACAGACTGCAAAG
CAAGCATGCATGTTAAGAGGAGATCAGATGGAAAATGGGTTATACACAGTTTTGTGAAGG
AGCATAACCATGAACTCTTACCAGCTCAAGCAGTCAGTGAACAAACGAGAAAGATGTATG
CGGCGATGGCTAGACAATTCGCTGAATATAAGAGTGTGGTTGGTCTCAAGAATGACTCCA
AAAGTCCATTTGATAAGAGTCGGAATCTGGCACTAGAACCAGGAGATGCAAAAGTTTTGC
TCGAATTTTTTACACAGATGCAGCATGTAAATTCCAACTTCTTTTATGCAATAGATCTGG
CTGAAGATCAACGTCTGAAAAATCTGTTCTGGGTTGATGCCAAAAGCAGGCATGATTATA
TCAATTTCTCTGATGTCGTTTCTTTTGACACTACCTATATTAGGAATAAGTATAAAATGC
CTCTTGCTCTTTTTATTGGAGTGAATCAACATTATCAATTTGTGTTGCTTGGATGTGCGT
TAATATCAGATGAGAGCGCAGCAACATTTTCTTGGTTAATGCAGACATGGCTGAAGGCAA
TGGGTGGACAATCTCCCAAAGTAATAATTACTGACCAAGACAAAGGCATGAAATCAGCTA
TTTCGGAGGTTTTTCCAAATGCTTATCATGCCTTTTTCTTGTGGCACATTTTGGGGAAGG
TTTCTGAAAGTCTTGGGCAGGTTATTAAACAGCATGAAAATTTTATGGCAAAATTTGAAA
AATGCATTTACAGGTCATGGACAGAGGAAGAGTTTGAAAACAGATGGTGTAAAATTCTTG
ATAGATTTGAACTCAAAGAGGATGAATGGATGCAGTCGTTGTATGAAGATCGTAAACAAT
GGGTGCCAACCTTCATGAAGGATGCCTTTTTAGCTGGAATGTCTACAGTTCAGCGATCTG
AAAGTGTTAATGCTTTCTTTGACAAATACGTGCATAAGAAAACTACAGTGCAAGAGTTTG
TGAAACTCTATGAAGCAATTCTACAAGATAGATATGAGGACGAAGCCAAAGCAGATTCTG
ATACTTGGAACAAACAACCTGCTTTAAAATCTCCATCGCCTTTGGAGAAGCATATGTCAA
GGTTGTACACACATGCAGTATTTAAGAAATTCCAAGGTGAGGTTTTGGGTGCGGTTGCTT
GTCATCCTAAAAGAGAAAGACAAGACGACACAACCATAACTTTCAGAGTTCAAGATTTTG
AGAAGAATCAAGACTTCATTGTAACATGGAATGATATGAAGTCGGAAGTTTCTTGTATAT
GCCGGTTATTTGAATATAAAGGTTTTCTTTGTAGACATGCAATGATAGTTCTCCAAATTT
GTGGCCTTTCAGACATTCCATCTCAATATATCCTGAAACGTTGGACGAAAGATGCAAAGA
GCAGGCACTTACTGGGAGAAGAATCTGAACAGGTGCAATCTAGGTCGCAGCGATACAATG
ACTTATGTCAACGAGCTATGAAATTGGGTGAAGAGGGATCATTATCCCAAGAGAGTTATG
ATATTGCATTCCGTGTGCTAGAAGAAGCTTTTGTAAATTGTGTTAATGTGAATAACTCTA
GTAAGAGTCTTATAGAAGCTGGCACATCAGGCGCTCATGGGCTCCTCTGCATTGAAGATG
ATAACCAAAGTAGAAATATGAGCAAGACAAATAAGAAAAAGAATCCAACCAAGAAAAGAA
AGGTACCCACTGAGCCAGAAGTTTTGGCTGTTGCAGCGTCAGACAGCTTGCAACAAATGG
ACAAATTAAATTCTAGAGCAGTAACCCTTGACAGCTACTATGGTGCGCAACAGAGTGTCC
AAGGAATGGTACAACTTAACTTAATGGCACCTAATCGTGACAATTACTATGGGAATCAGC
AGACAATTCAGGGCCTGGGGCAACTAAACTCAATAGCACCAAGTCATGATGGTTATTATG
GCGCTCAGCAAAGCATTCATGGACTGGGGCAGATGGATTTTTTCCGAACACCAACTAGTT
TTGCTTATGCCATTCGGGATGAGCCTAATGTGAGATCCGCGCAGTTGCACGATGATGCAC
CAAGACATGCATGAGGAGCCTATCTCTCATTACAAAAGCAAGGCATTACAAAAGGAAAAT
TGTGCTGGAGCTGGAAATCTCTGTAAAAAATGAAATGTACCATGCATTGTGAATGGAGGA
TTACCGAAGAAGAGAACCTTCTTCTCGGTGTCTGTAAAATAAGCAAAGGTAGATGAGGTA
GTTCTGTTATTACCCTACATCTGATAGCAATACCCATTAAGCGTTGGAACAAATCCTGAG
TTAGGGTTTATTTCTCTTGTAAAGTTTGTTGTATTGTTATATCATATTTGTGACTGCTTC
AAGCCCAAATA