Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g01760.t01
CDS Infomation

cds chromosome:12X:3:17918917:17928021:-1 gene:VIT_03s0017g01760 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTTTTAGAAACCTCGTTAGATCCACTCTCAGGAACACTCAGGCTGTTTCATACAAA
AATCATGTTGCGGCTGCTAGAAGTTTGCAGGAGCATCTGGTTCGGGCTCCCGTGCTGGCC
AGATGGAACAGCACAGAGGCATCCATGCAAAGGGAAGATGCAGAAACCGAGTTGAAGAAT
GCTAAAGAGTTCAAGGGCCATGATATGTTGGCACCTTTCACAGCCGGGTGGCAGGCTTCT
GATACAAATCCTCTAGTAATAGAGAAGTCTAAGGGTGCCTATGTCTGGGACATCAATGGA
AAGAAGTATCTCGATTCTCTGGCTGGTCTATGGTGCACAGCTTTAGGGGGGAGTGAACCT
CGACTTGTTGCTGCTGCAATTGCTCAACTAAATACCTTGCCGTTTTACCACTCCTTTTGG
AATCGTACTACAAAACCCTCTCTGGATCTTGCAAAGGAACTTCTAAACACTTTTACAGCA
ACAAAAATGGGAAAAGCATTTTTTACAAATAGTGGATCAGAAGCCAATGATACCCAGGTG
AAGTTGGTATGGTATTATAATAATGCACTTGGAAGACCAAATAAGAAGAAATTCATAGCT
CGGGAAAAATCGTACCATGGATCAACCCTAATATCAGCTAGTCTTTCAGGACTTCCAGCA
TTGCATCAAAAATTTGATCTGCCTGCTCCATTTGTACTACACACTGATTGTCCTCATTAC
TGGCGCTATCATCTTCCAGGTGAGTCAGAAGAGGAGTTCTCAACCAGATTAGCCAATAAT
TTAGAGAATCTTATCCTGAAAGAGGGACCAGAGACGATTGCCGCATTCATTGCAGAGCCT
GTCATGGGAGCAGGAGGTGTGATTCCTCCACCTGCAACTTATTTTGATAAGATCCAACCT
ATCTTGAAAAAATATGATATTCTCTTTATTGCGGATGAGGTAATTTGTGCATTTGGAAGG
CTTGGAACAATGTTTGGATGTGACAAATATGGCATGAAACCAGACCTTGTCTCCATGGCA
AAGGCTCTGTCTTCTGCATATATGCCAATTGGAGCCGTTCTTGTGAGCCCTGAAATTTCA
GATGTTATAGACTCTCAAAGCAACAAACTTGGTGTTTTTTCTCATGGATTTACCTATTCC
GGGCACCCTGTCTCCTGTGCAGTTGCATTGGAAGCCCTCAAAATCTACAAGGAAAGAAAC
ATTGCTGAGGTAGTACAGAGAATTTCCCCAAAGTTTCAAAATGGGCTAAAAGCCTTCTCC
GACAGTCCCATTATTGGAGAGATACGAGGAACTGGCTTGATTCTCGGTACTGAGTTCACA
GACAATAAGTCACCTAATGATGTGTTCCCTCCTGAATGGGGCAAGTTCCACCTTTCTTTT
GCTTTTATTTTTTGCATAGGTGCATATTTTGGAGCACAGTGCCAGAAGCATGGGATGCTA
GTACGTGTTGCAGGGGATAGCATCATGATGTCTCCCCCATTTATAATCACCCCTGAAGAA
GTTGACGAGTTAATCAGCATATATGGGAAAGCACTGAAGGCTACTGAAGAGAGGGTGAAG
GAGCTCAAGTCCCTGCAGAAGTAA

Peptide Sequence

PEP ID

VIT_03s0017g01760.t01
PEP Infomation

pep chromosome:12X:3:17918917:17928021:-1 gene:VIT_03s0017g01760 transcript:VIT_03s0017g01760.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIFRNLVRSTLRNTQAVSYKNHVAAARSLQEHLVRAPVLARWNSTEASMQREDAETELKN
AKEFKGHDMLAPFTAGWQASDTNPLVIEKSKGAYVWDINGKKYLDSLAGLWCTALGGSEP
RLVAAAIAQLNTLPFYHSFWNRTTKPSLDLAKELLNTFTATKMGKAFFTNSGSEANDTQV
KLVWYYNNALGRPNKKKFIAREKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHY
WRYHLPGESEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQP
ILKKYDILFIADEVICAFGRLGTMFGCDKYGMKPDLVSMAKALSSAYMPIGAVLVSPEIS
DVIDSQSNKLGVFSHGFTYSGHPVSCAVALEALKIYKERNIAEVVQRISPKFQNGLKAFS
DSPIIGEIRGTGLILGTEFTDNKSPNDVFPPEWGKFHLSFAFIFCIGAYFGAQCQKHGML
VRVAGDSIMMSPPFIITPEEVDELISIYGKALKATEERVKELKSLQK

Transcript Sequence

Transcript ID

VIT_03s0017g01760.t01
Transcript Infomation

cdna chromosome:12X:3:17918917:17928021:-1 gene:VIT_03s0017g01760 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCTCTCTCTCTCTCTCTCTCTATCTCTATCTCTCTCTTTCTCTCTATTCCTCTGTCT
CTTCTGTAGTTGAGTGCAGACCGAGGAGAGTGAAGATAGCAACTTGCATCATCTTTGAAG
ATAAGGGAAAAAATAGAAAATGATTTTTAGAAACCTCGTTAGATCCACTCTCAGGAACAC
TCAGGCTGTTTCATACAAAAATCATGTTGCGGCTGCTAGAAGTTTGCAGGAGCATCTGGT
TCGGGCTCCCGTGCTGGCCAGATGGAACAGCACAGAGGCATCCATGCAAAGGGAAGATGC
AGAAACCGAGTTGAAGAATGCTAAAGAGTTCAAGGGCCATGATATGTTGGCACCTTTCAC
AGCCGGGTGGCAGGCTTCTGATACAAATCCTCTAGTAATAGAGAAGTCTAAGGGTGCCTA
TGTCTGGGACATCAATGGAAAGAAGTATCTCGATTCTCTGGCTGGTCTATGGTGCACAGC
TTTAGGGGGGAGTGAACCTCGACTTGTTGCTGCTGCAATTGCTCAACTAAATACCTTGCC
GTTTTACCACTCCTTTTGGAATCGTACTACAAAACCCTCTCTGGATCTTGCAAAGGAACT
TCTAAACACTTTTACAGCAACAAAAATGGGAAAAGCATTTTTTACAAATAGTGGATCAGA
AGCCAATGATACCCAGGTGAAGTTGGTATGGTATTATAATAATGCACTTGGAAGACCAAA
TAAGAAGAAATTCATAGCTCGGGAAAAATCGTACCATGGATCAACCCTAATATCAGCTAG
TCTTTCAGGACTTCCAGCATTGCATCAAAAATTTGATCTGCCTGCTCCATTTGTACTACA
CACTGATTGTCCTCATTACTGGCGCTATCATCTTCCAGGTGAGTCAGAAGAGGAGTTCTC
AACCAGATTAGCCAATAATTTAGAGAATCTTATCCTGAAAGAGGGACCAGAGACGATTGC
CGCATTCATTGCAGAGCCTGTCATGGGAGCAGGAGGTGTGATTCCTCCACCTGCAACTTA
TTTTGATAAGATCCAACCTATCTTGAAAAAATATGATATTCTCTTTATTGCGGATGAGGT
AATTTGTGCATTTGGAAGGCTTGGAACAATGTTTGGATGTGACAAATATGGCATGAAACC
AGACCTTGTCTCCATGGCAAAGGCTCTGTCTTCTGCATATATGCCAATTGGAGCCGTTCT
TGTGAGCCCTGAAATTTCAGATGTTATAGACTCTCAAAGCAACAAACTTGGTGTTTTTTC
TCATGGATTTACCTATTCCGGGCACCCTGTCTCCTGTGCAGTTGCATTGGAAGCCCTCAA
AATCTACAAGGAAAGAAACATTGCTGAGGTAGTACAGAGAATTTCCCCAAAGTTTCAAAA
TGGGCTAAAAGCCTTCTCCGACAGTCCCATTATTGGAGAGATACGAGGAACTGGCTTGAT
TCTCGGTACTGAGTTCACAGACAATAAGTCACCTAATGATGTGTTCCCTCCTGAATGGGG
CAAGTTCCACCTTTCTTTTGCTTTTATTTTTTGCATAGGTGCATATTTTGGAGCACAGTG
CCAGAAGCATGGGATGCTAGTACGTGTTGCAGGGGATAGCATCATGATGTCTCCCCCATT
TATAATCACCCCTGAAGAAGTTGACGAGTTAATCAGCATATATGGGAAAGCACTGAAGGC
TACTGAAGAGAGGGTGAAGGAGCTCAAGTCCCTGCAGAAGTAAGCAGCAGGGGGCATTTG
CTGCTGATGATGACGAAAGGTCTGTTGGCCTCATGTATAGAAAACTCAATAATGTGTTGT
TGAGAGTACTGGTACCTGATAAAGCATCTTCCCTTCTCATGAA