Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g01490.t01
CDS Infomation

cds chromosome:12X:3:17484861:17486877:-1 gene:VIT_03s0017g01490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAAGGTCTTCCTTTCGTCTGCTACTTCTCCTTCTTGGTTTTCTTCTTGTTTCATCA
TATGCAGCTTCAGATTCAGTATATGATACCTTTGTTCAATGCCTATCAAACCATTCAGCC
CCATCTCACCAAGCTTCATCAATAGTCTACGCCCAAACAAATTCTTCATTCACAAATGTG
CTTCGATCTTATATCCGAAACGAACGGTTCAACACATCTTCCACGCCCAAACCCTTGATC
ATTGTCACCCCCTCGGATGAATCCCAAGTCCAGGCTGCCATAATTTGCTCTAGAGACATC
GGCATACTGCTAAAAATCCGAAGTGGTGGCCATGACTACGATGGCCTATCTTCTGTCTCT
GATGTCCCATTTTTCATCCTTGATATGTTCAATCTTCGGTCCATCAACGTGAATATCACT
GATGAAACTGCTTGGGTTCAAGCTGGTGCTACCCTAGGAGAACTCTACTACAGAATTTGG
GAGAAAAGCAGAGTCCATGGATTTCCAGCTGGGGTTTGCCCCACTCTGGGTGTAGGCGGG
CACTTGAGTGGTGGGGGCTATGGTAATATGTTGCGAAAATATGGACTCTCTATTGATCAT
ATTGTGGATGCCCAGATAATCAATGTTAATGGCAGCATTCTCGATCGAAAGTCCATGGGA
GAAGACCTCTTTTGGGCCATTAGAGGAGGTGGCGGAGCTAGCTTTGGAGTCATATTGTCA
TATAAGGTCAAGCTTGTCCGAGTGCCCGAAATTGTTACAGTTTTTCGGGTCGAGAAGACC
CTGGCCCAAAACGCCACTGACTTAGTCTATCAGTGGCAGCACATCACTGACAAGATCGAT
AATGATCTTTTCATGAGGCTTCTCCTCCAACCTATCACGGTGAAAAGCGACAATGGGTCC
TCCAAGACTGTTAGGGTGACCTTCATATCACTGTTTCTTGGAGACGCGACCCGTCTCATT
TCAGTGATGAACAAGGATTTCCCAGAATTAGGGCTAAAGAAAGAGGACTGCAAGGAAATG
AGCTGGATTGAATCAGTCCTCTACTGGGCTAATTTCGATAACAGAACATCAGTGAATGTT
CTGCTAAACCGGACCCTAGAGTCAGTGAAATTCTTTAAGGCGAAGTCAGACTACATGCAG
AAACCCATGTCCAAGGATGGTCTAGAAGGGCTGTGGAAGAAGATGATTGAATTAGGCAAA
CCAGGGATGGTGTTCAATTCATACGGAGGGCGAATGAGTGAAATCCCCGCATCTGAAACC
CCCTTCCCACATCGCGCTGGGAACATATTCAAGATCCAGTACTCAGTGAATTGGCATGAA
GAAGGGACTGAAGCAGACAAGAAGTATGTGAACTTGATAAGAGAGCTTCATAGCTACATG
ACCCCACTTGTGTCCAAGTCCCCTAGAGGTTCATATCTCAACTATAGAGATATTGATATT
GGTATTAGCCACAATGGTAAAGATAGCTACCAAGAAGGTAAGGTATATGGGGTTAAGTAC
TTTATGAACAATTTTGACAGGTTGGTGAAAGTGAAGACTGCTGTGGACCCTCAGAATTTT
TTCAGTAGCATCTGTATTACTTTTGCTAGTAGCATCTCTATTAAAAGTGCATTTAAAAGC
ATTAGTTCCGTATTTTAA

Peptide Sequence

PEP ID

VIT_03s0017g01490.t01
PEP Infomation

pep chromosome:12X:3:17484861:17486877:-1 gene:VIT_03s0017g01490 transcript:VIT_03s0017g01490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSRSSFRLLLLLLGFLLVSSYAASDSVYDTFVQCLSNHSAPSHQASSIVYAQTNSSFTNV
LRSYIRNERFNTSSTPKPLIIVTPSDESQVQAAIICSRDIGILLKIRSGGHDYDGLSSVS
DVPFFILDMFNLRSINVNITDETAWVQAGATLGELYYRIWEKSRVHGFPAGVCPTLGVGG
HLSGGGYGNMLRKYGLSIDHIVDAQIINVNGSILDRKSMGEDLFWAIRGGGGASFGVILS
YKVKLVRVPEIVTVFRVEKTLAQNATDLVYQWQHITDKIDNDLFMRLLLQPITVKSDNGS
SKTVRVTFISLFLGDATRLISVMNKDFPELGLKKEDCKEMSWIESVLYWANFDNRTSVNV
LLNRTLESVKFFKAKSDYMQKPMSKDGLEGLWKKMIELGKPGMVFNSYGGRMSEIPASET
PFPHRAGNIFKIQYSVNWHEEGTEADKKYVNLIRELHSYMTPLVSKSPRGSYLNYRDIDI
GISHNGKDSYQEGKVYGVKYFMNNFDRLVKVKTAVDPQNFFSSICITFASSISIKSAFKS
ISSVF

Transcript Sequence

Transcript ID

VIT_03s0017g01490.t01
Transcript Infomation

cdna chromosome:12X:3:17484861:17486877:-1 gene:VIT_03s0017g01490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACTAATCATACAAGTAAGTGGGTCTATCAACAGACAAAAAAATATATTAAATTAAATTA
AAGAAATAAAAAATAAACTCTCTTGAGGGCCACTAGAAAATTGAAGAAATGGAGATGTCA
AGGTCTTCCTTTCGTCTGCTACTTCTCCTTCTTGGTTTTCTTCTTGTTTCATCATATGCA
GCTTCAGATTCAGTATATGATACCTTTGTTCAATGCCTATCAAACCATTCAGCCCCATCT
CACCAAGCTTCATCAATAGTCTACGCCCAAACAAATTCTTCATTCACAAATGTGCTTCGA
TCTTATATCCGAAACGAACGGTTCAACACATCTTCCACGCCCAAACCCTTGATCATTGTC
ACCCCCTCGGATGAATCCCAAGTCCAGGCTGCCATAATTTGCTCTAGAGACATCGGCATA
CTGCTAAAAATCCGAAGTGGTGGCCATGACTACGATGGCCTATCTTCTGTCTCTGATGTC
CCATTTTTCATCCTTGATATGTTCAATCTTCGGTCCATCAACGTGAATATCACTGATGAA
ACTGCTTGGGTTCAAGCTGGTGCTACCCTAGGAGAACTCTACTACAGAATTTGGGAGAAA
AGCAGAGTCCATGGATTTCCAGCTGGGGTTTGCCCCACTCTGGGTGTAGGCGGGCACTTG
AGTGGTGGGGGCTATGGTAATATGTTGCGAAAATATGGACTCTCTATTGATCATATTGTG
GATGCCCAGATAATCAATGTTAATGGCAGCATTCTCGATCGAAAGTCCATGGGAGAAGAC
CTCTTTTGGGCCATTAGAGGAGGTGGCGGAGCTAGCTTTGGAGTCATATTGTCATATAAG
GTCAAGCTTGTCCGAGTGCCCGAAATTGTTACAGTTTTTCGGGTCGAGAAGACCCTGGCC
CAAAACGCCACTGACTTAGTCTATCAGTGGCAGCACATCACTGACAAGATCGATAATGAT
CTTTTCATGAGGCTTCTCCTCCAACCTATCACGGTGAAAAGCGACAATGGGTCCTCCAAG
ACTGTTAGGGTGACCTTCATATCACTGTTTCTTGGAGACGCGACCCGTCTCATTTCAGTG
ATGAACAAGGATTTCCCAGAATTAGGGCTAAAGAAAGAGGACTGCAAGGAAATGAGCTGG
ATTGAATCAGTCCTCTACTGGGCTAATTTCGATAACAGAACATCAGTGAATGTTCTGCTA
AACCGGACCCTAGAGTCAGTGAAATTCTTTAAGGCGAAGTCAGACTACATGCAGAAACCC
ATGTCCAAGGATGGTCTAGAAGGGCTGTGGAAGAAGATGATTGAATTAGGCAAACCAGGG
ATGGTGTTCAATTCATACGGAGGGCGAATGAGTGAAATCCCCGCATCTGAAACCCCCTTC
CCACATCGCGCTGGGAACATATTCAAGATCCAGTACTCAGTGAATTGGCATGAAGAAGGG
ACTGAAGCAGACAAGAAGTATGTGAACTTGATAAGAGAGCTTCATAGCTACATGACCCCA
CTTGTGTCCAAGTCCCCTAGAGGTTCATATCTCAACTATAGAGATATTGATATTGGTATT
AGCCACAATGGTAAAGATAGCTACCAAGAAGGTAAGGTATATGGGGTTAAGTACTTTATG
AACAATTTTGACAGGTTGGTGAAAGTGAAGACTGCTGTGGACCCTCAGAATTTTTTCAGT
AGCATCTGTATTACTTTTGCTAGTAGCATCTCTATTAAAAGTGCATTTAAAAGCATTAGT
TCCGTATTTTAA