Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g00990.t01
CDS Infomation

cds chromosome:12X:3:16344072:16360617:-1 gene:VIT_03s0017g00990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGATCTCAGGGTTTGGATTTCAAGGACCTCCCCGAGGCTTCTTCCTCAGATGGT
GCACTCTTTGATGCATCACAATATGAATTTTTTGGTCAACATGCTGTGGAGGAAGTGGAG
TTGGGGGGTTTGGAGAATGAAGAAAATATTCCTGTATTTGGATCCGTTGACGATGAGTAT
CAGTTGTTTGAGAGAGAAGAGAGTGTAGGTTTAAGTTCTTTGTCTGACATCGATGATCTG
GCAAGTACATTTTCAAAGTTGAACAGAGTTGTTACTGGACCAAGAAATCCAGGAGTTATT
GGTGATAGGGGTTCTGGATCTTTTTCAAGAGAAAGTTCGTCTGCAGCTGATTGGGCACAA
GACACAGATTTTCCGAACTGGTTGGATCAGCATATGTTTGATGCAGAATGTTCTCAGGAA
GGCAAGAGGTGGTCATCACAGCCACATGCTTCTTCTGCTCATCTAGGTGAATCAAGGCCT
TTGTACAGAACATCGTCATATCCTCAGCAGCCACAGCAGCCACATCACTTCTCGAGTGAA
CCAATTTTAGTGCCCAAATCATCTTTCACATCTTTCCCTCCGGGTGGCAGTTCTCAACAG
GCTTCACCACGCCACCACCATTCACATCACCTGAATATTTCATCTCTTACTGTCGGACCT
CAGTTGCACTTATCTGCGCCAAATCTATCTCCTTTATCTAACTCTAATATCCATTTGTCT
GGCTTACCACATGGGTTGCATTACGGTGGAAATATACCTCAGTTCAACCCTCCTGGTCTA
TCTGTTAATAATAGGCCACTGAACCACTGGGTCAATCATGCTGGCTTAATTCATGGAGAT
CACCCTAGCCTCTTGAACAATATTCTGCAACAACAATTACCTCATCAAAATGGGATAATG
CCCCAACAGTTAATGTCACAACAGCAGCTTCAACAGCAGAGGTTGCATCATTCAGTTCAA
CCATCCATGGCCCATTTTTCAGCACTGCGATCCCAACTGTATAATACCCATCCTTCACCT
CAACATAAAGGAATGCCTGGATTGTCTGATATGAGAGATCAAAGACCCAAGTCAACACAA
AGGAGTAAACAAAACATGCGCTTTTCTCACCAAGCCTCTGATTCTAGCAGCCAGAAAAGT
GATAATGGTCTGGTGCAATTCAGGTCCAAGTATATGACAGCTGATGAGATAGAGAGTATT
CTTAGAATGCAGCATGCTGCCACACATAGCAATGACCCCTACATAGATGATTATTACCAC
CAAGCACGTCTTGCTAAAAAATCTGCTGAATCAAGGTTGAAACACCATTTCTACCCGTCT
CACCTTAAGGATCTTCCTACTCGAGGACGCAATAATACAGAACAGCATTCTCATCTCCCT
GTAGATGCTCTTGGGAGGATTGCCTTCTCTTCCATCCGTAGGCCTCGCCCCCTCCTTGAA
GTAGACTCTCCTTCCTCTGGCTCTAATGATGGCAGCACTGAACAGAATGTCACTGTAAAG
CCACTGGAACAGGAACCAATGCTTGCAGCTAGGATAGCTATTGAGGATGGCCTTTGTCTT
CTCCTTGACGTAGATGATATTGATCGGGTTTTACAATTTAGTCCCCCCCAAGATGGAGGG
ATTCAGCTGAGGCGGAAGCGGCAGATGCTGTTGGAAGGGTTAGCAGCTTCACTTCAGCTT
GTTGACCCGCTTGGGAAAAGTGGCCATGCAGTTGGGTTGGCTCCCAATGATGACCTTGTT
TTCCTGCGTTTGGTCTCTCTTCCCAAGGGCCGAAAGCTCCTTTTCAGGTACATTCAGCTA
CTTTTCCCAGGTGGTGAGCTTGCCAGAATTGTCTGCATGGCTATTTTCCGTCATTTGAGG
TTTTTATTTGGCGGCCTTCCCTCTGATAAGGGGGCGGCAGAGACAACAATAGATCTCGCA
AAGACAGTTTCCACTTGTGTTAATGGCATGGATCTTCGTGCTTTGAGTGCTTGTCTGGTT
GCAGTTGTTTGTTCTTCAGAGCAGCCACCCCTCCGCCCTCTTGGAAGCCCTGCTGGAGAT
GGGGCCTCTATTATCTTAAAATCTGTTCTTGAAAGGGCAACCGAACTCCTAACTGATCCT
CATGTTGCTGGCAAATGTAGCATGCCCAACCGTGCTCTTTGGCAGGCTTCTTTTGATGAA
TTCTTTAGTCTTCTTACCAAGTATTGCCTGAGTAAATATGAGACTATCATACACCGGGAA
ATGCCTGTGGAGCTTCTACGTGCAAGTCTTCCTCACACTGATGAGCACCAGCGGAAGCTT
TTACTAGATTTTGCTCAGCGATCCATGCCCATCACAGGATTCAATACCCGAGGGAGCAGT
GGCCAGGTAACTTCTGAATCAGTGAGGGGTTAA

Peptide Sequence

PEP ID

VIT_03s0017g00990.t01
PEP Infomation

pep chromosome:12X:3:16344072:16360617:-1 gene:VIT_03s0017g00990 transcript:VIT_03s0017g00990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERSQGLDFKDLPEASSSDGALFDASQYEFFGQHAVEEVELGGLENEENIPVFGSVDDEY
QLFEREESVGLSSLSDIDDLASTFSKLNRVVTGPRNPGVIGDRGSGSFSRESSSAADWAQ
DTDFPNWLDQHMFDAECSQEGKRWSSQPHASSAHLGESRPLYRTSSYPQQPQQPHHFSSE
PILVPKSSFTSFPPGGSSQQASPRHHHSHHLNISSLTVGPQLHLSAPNLSPLSNSNIHLS
GLPHGLHYGGNIPQFNPPGLSVNNRPLNHWVNHAGLIHGDHPSLLNNILQQQLPHQNGIM
PQQLMSQQQLQQQRLHHSVQPSMAHFSALRSQLYNTHPSPQHKGMPGLSDMRDQRPKSTQ
RSKQNMRFSHQASDSSSQKSDNGLVQFRSKYMTADEIESILRMQHAATHSNDPYIDDYYH
QARLAKKSAESRLKHHFYPSHLKDLPTRGRNNTEQHSHLPVDALGRIAFSSIRRPRPLLE
VDSPSSGSNDGSTEQNVTVKPLEQEPMLAARIAIEDGLCLLLDVDDIDRVLQFSPPQDGG
IQLRRKRQMLLEGLAASLQLVDPLGKSGHAVGLAPNDDLVFLRLVSLPKGRKLLFRYIQL
LFPGGELARIVCMAIFRHLRFLFGGLPSDKGAAETTIDLAKTVSTCVNGMDLRALSACLV
AVVCSSEQPPLRPLGSPAGDGASIILKSVLERATELLTDPHVAGKCSMPNRALWQASFDE
FFSLLTKYCLSKYETIIHREMPVELLRASLPHTDEHQRKLLLDFAQRSMPITGFNTRGSS
GQVTSESVRG

Transcript Sequence

Transcript ID

VIT_03s0017g00990.t01
Transcript Infomation

cdna chromosome:12X:3:16344072:16360617:-1 gene:VIT_03s0017g00990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGGGAAACAACCCGAAAAAATCCCTCAAATTTAAGCTTTTGATTATGCTGCTGTTTGGA
TTTCTGGGGTTTTAGCTCTTCTGATTCTGTGGAAATGGAGAGATCTCAGGGTTTGGATTT
CAAGGACCTCCCCGAGGCTTCTTCCTCAGATGGTGCACTCTTTGATGCATCACAATATGA
ATTTTTTGGTCAACATGCTGTGGAGGAAGTGGAGTTGGGGGGTTTGGAGAATGAAGAAAA
TATTCCTGTATTTGGATCCGTTGACGATGAGTATCAGTTGTTTGAGAGAGAAGAGAGTGT
AGGTTTAAGTTCTTTGTCTGACATCGATGATCTGGCAAGTACATTTTCAAAGTTGAACAG
AGTTGTTACTGGACCAAGAAATCCAGGAGTTATTGGTGATAGGGGTTCTGGATCTTTTTC
AAGAGAAAGTTCGTCTGCAGCTGATTGGGCACAAGACACAGATTTTCCGAACTGGTTGGA
TCAGCATATGTTTGATGCAGAATGTTCTCAGGAAGGCAAGAGGTGGTCATCACAGCCACA
TGCTTCTTCTGCTCATCTAGGTGAATCAAGGCCTTTGTACAGAACATCGTCATATCCTCA
GCAGCCACAGCAGCCACATCACTTCTCGAGTGAACCAATTTTAGTGCCCAAATCATCTTT
CACATCTTTCCCTCCGGGTGGCAGTTCTCAACAGGCTTCACCACGCCACCACCATTCACA
TCACCTGAATATTTCATCTCTTACTGTCGGACCTCAGTTGCACTTATCTGCGCCAAATCT
ATCTCCTTTATCTAACTCTAATATCCATTTGTCTGGCTTACCACATGGGTTGCATTACGG
TGGAAATATACCTCAGTTCAACCCTCCTGGTCTATCTGTTAATAATAGGCCACTGAACCA
CTGGGTCAATCATGCTGGCTTAATTCATGGAGATCACCCTAGCCTCTTGAACAATATTCT
GCAACAACAATTACCTCATCAAAATGGGATAATGCCCCAACAGTTAATGTCACAACAGCA
GCTTCAACAGCAGAGGTTGCATCATTCAGTTCAACCATCCATGGCCCATTTTTCAGCACT
GCGATCCCAACTGTATAATACCCATCCTTCACCTCAACATAAAGGAATGCCTGGATTGTC
TGATATGAGAGATCAAAGACCCAAGTCAACACAAAGGAGTAAACAAAACATGCGCTTTTC
TCACCAAGCCTCTGATTCTAGCAGCCAGAAAAGTGATAATGGTCTGGTGCAATTCAGGTC
CAAGTATATGACAGCTGATGAGATAGAGAGTATTCTTAGAATGCAGCATGCTGCCACACA
TAGCAATGACCCCTACATAGATGATTATTACCACCAAGCACGTCTTGCTAAAAAATCTGC
TGAATCAAGGTTGAAACACCATTTCTACCCGTCTCACCTTAAGGATCTTCCTACTCGAGG
ACGCAATAATACAGAACAGCATTCTCATCTCCCTGTAGATGCTCTTGGGAGGATTGCCTT
CTCTTCCATCCGTAGGCCTCGCCCCCTCCTTGAAGTAGACTCTCCTTCCTCTGGCTCTAA
TGATGGCAGCACTGAACAGAATGTCACTGTAAAGCCACTGGAACAGGAACCAATGCTTGC
AGCTAGGATAGCTATTGAGGATGGCCTTTGTCTTCTCCTTGACGTAGATGATATTGATCG
GGTTTTACAATTTAGTCCCCCCCAAGATGGAGGGATTCAGCTGAGGCGGAAGCGGCAGAT
GCTGTTGGAAGGGTTAGCAGCTTCACTTCAGCTTGTTGACCCGCTTGGGAAAAGTGGCCA
TGCAGTTGGGTTGGCTCCCAATGATGACCTTGTTTTCCTGCGTTTGGTCTCTCTTCCCAA
GGGCCGAAAGCTCCTTTTCAGGTACATTCAGCTACTTTTCCCAGGTGGTGAGCTTGCCAG
AATTGTCTGCATGGCTATTTTCCGTCATTTGAGGTTTTTATTTGGCGGCCTTCCCTCTGA
TAAGGGGGCGGCAGAGACAACAATAGATCTCGCAAAGACAGTTTCCACTTGTGTTAATGG
CATGGATCTTCGTGCTTTGAGTGCTTGTCTGGTTGCAGTTGTTTGTTCTTCAGAGCAGCC
ACCCCTCCGCCCTCTTGGAAGCCCTGCTGGAGATGGGGCCTCTATTATCTTAAAATCTGT
TCTTGAAAGGGCAACCGAACTCCTAACTGATCCTCATGTTGCTGGCAAATGTAGCATGCC
CAACCGTGCTCTTTGGCAGGCTTCTTTTGATGAATTCTTTAGTCTTCTTACCAAGTATTG
CCTGAGTAAATATGAGACTATCATACACCGGGAAATGCCTGTGGAGCTTCTACGTGCAAG
TCTTCCTCACACTGATGAGCACCAGCGGAAGCTTTTACTAGATTTTGCTCAGCGATCCAT
GCCCATCACAGGATTCAATACCCGAGGGAGCAGTGGCCAGGTAACTTCTGAATCAGTGAG
GGGTTAATAGAAGAGGAAATAAAGAAATATGATGTGAAAGGCATCTCAGAAACATCCATA
TGCTGTAGTGGATTAGTTGTGTGTCATCCCTTCACAAAGGCAATATATACACACACATAT
ATATGCTTAGGAATGAAATGTGGCCACACTGGCTTCAGCCTCATTTGTTTTCCTGTCTTT
TTTGTTCCTTTTTAAAAGTGTTGGATACGTTATGTGATGTTCATCTTGTTAAACTTAGTC
ATATATGCATTAATGTGTACTATCGTCAAGGGGAGTTTGTGACTGGAAGTGTTTTTTCTT
CTGGGGAGCTTAATTTTGGTGCTCTGTGTTGAAACTCCGGCCAAAACTGGGAAGTATAGG
GAAAGAGAATGTACAGAGGGTGGTCCTACCAAAACCTTCGAACCCCGTTCTTCCTCCTTA
TGGACCTAGAAAGAAGTTTGTGGTCGTCTCAAGATGGGGGAAGTATCAATTATGTATTTT
GTTAGCATGATATAGTAGTAGTCTAGGGTTTTTTATTTCCCTTCTTGTATTACTTTGATG
AGAAAATCTTGTAATAATTGAAGTTGTTGTAGTTATATTTGACAAAGTTCTGGATTTGAT
GTTATGCATGATTCAACTTTCTTAGGTTTTTCGATACCAA