Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0017g00650.t01
CDS Infomation

cds chromosome:12X:3:15420721:15427045:1 gene:VIT_03s0017g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCCATCAACGCTTCTTGCCCAACAGCAGCTATTTCCCGTTTACGGGCATGCAAA
AACTTCAAATTGTTTAATGGACTGCACGGTGTGAATCCCTCTTTGTCAAATTGGTATACA
TCTGATTTGGCTTTGATTCGGTTGGGTAGCAAATCATCGTTCACTATCAAGGGTGATGGT
AGAACTAGAGCTACATTGATATCTGGAGAAGGTGGCCTCCTATCATACTCCAATGGCAAT
AATGTTGCTGCAATCACCAAGGACCAATCTGTTGGAATTGAGATACAGCCTGATGCAATA
GCATTTGGAACGCTTGAAGCAGATACTGCTCCCGCAACTAATGGATTTCCCATTGATAAT
GATGAATTTGATCTGGATCGTCCCTCAGAAGGTTTTTCTTCCATTCCAGAGGCCATTGAG
GACATTCGTCAAGGAAAGATAGTGGTGGTTGTGGATGATGAAGATAGAGAAAATGAAGGG
GACCTAATAATGGCAGCTTCACTGGCAACACCTGAAGCTATGGCATTTATTGTGAAGCAC
GGGACTGGAATTGTTTGTGTGAGCATGAAAGGAGAAGATTTGGAGAGGTTGGAAATTCCT
TTGATGGTAACCCAAAAGGATAATGATGAGAAACTTTCTACTGCATTCACAGTGTCAGTG
GATGCAAAGCATGGTACAACCACTGGGGTTTCAGCTCGTGATAGGGCAACAACAATATTG
GCTCTTGCATCCAGAGATTCAAAGCCTGAAGATTTCAATCGCCCAGGGCATATTTTTCCG
TTGAAGTACAGGGAGGGTGGTGTTCTGAAAAGAGCTGGACATACAGAAGCCTCTGTTGAC
CTTGCTATGCTAGCTGGCTTGGATCCTGTTGCAGTTTTATGTGAGGTTGTGGATGATGAT
GGTTCCATGGCGAGATTACCAAAGCTTCGCCAATTTGCAGAGAGAGAGAACTTAAAAATC
ATATCAATTGCTGATTTAATCAGATATAGGCGGAAGAGAGATAAATTAGTGGATCGTTCT
GCTGGGGCAAGGATACCTACAATGTGGGGGCCATTCACAGCATACTGCTATCGGTCCATC
TTAGATGGGATAGAACATATTGCTATGGTTAAGGGTGAGATTGGTGATGGGCAAGATATT
CTTGTGAGAGTACACTCGGAATGCCTCACAGGAGATATATTTGGGTCTGCTAGATGCGAT
TGTGGAAATCAGCTGGCACTTGCAATGCAACAGATTGAGAAAGCAGGGAAGGGTGTATTG
GTGTACCTCCGTGGGCATGAAGGAAGGGGCATTGGTTTGGGACACAAGCTTCATGCTTAT
AACCTGCAGGATGATGGACGTGATACTGTGGAAGCCAATGAAGAGCTGGGATTGCCTGTT
GATTCAAGAGAATACGGCATTGGTGCCCAGATGCTAAGAGATCTGGGTGTTCGAACCATG
AAGCTTATGACAAACAACCCTGCAAAGTACATTGGGCTCAAGGGCTATGGTTTGGCAGTT
TCTGGCAGAGTCCCACTTCTAACTCCCATTACAAAGGAGAACGGTAGATATTTGGAGACA
AAACGCTCTAAAATGGGACATGTCTATGGCTTAGAATTCAATGGTCATCTCACCAATCTT
ATCAGTGGGAATGGAAAACAGAGCATCAACACCCAACCTGATCCAGTCTCTGACTCGTAA

Peptide Sequence

PEP ID

VIT_03s0017g00650.t01
PEP Infomation

pep chromosome:12X:3:15420721:15427045:1 gene:VIT_03s0017g00650 transcript:VIT_03s0017g00650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASINASCPTAAISRLRACKNFKLFNGLHGVNPSLSNWYTSDLALIRLGSKSSFTIKGDG
RTRATLISGEGGLLSYSNGNNVAAITKDQSVGIEIQPDAIAFGTLEADTAPATNGFPIDN
DEFDLDRPSEGFSSIPEAIEDIRQGKIVVVVDDEDRENEGDLIMAASLATPEAMAFIVKH
GTGIVCVSMKGEDLERLEIPLMVTQKDNDEKLSTAFTVSVDAKHGTTTGVSARDRATTIL
ALASRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLDPVAVLCEVVDDD
GSMARLPKLRQFAERENLKIISIADLIRYRRKRDKLVDRSAGARIPTMWGPFTAYCYRSI
LDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMQQIEKAGKGVL
VYLRGHEGRGIGLGHKLHAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTM
KLMTNNPAKYIGLKGYGLAVSGRVPLLTPITKENGRYLETKRSKMGHVYGLEFNGHLTNL
ISGNGKQSINTQPDPVSDS

Transcript Sequence

Transcript ID

VIT_03s0017g00650.t01
Transcript Infomation

cdna chromosome:12X:3:15420721:15427045:1 gene:VIT_03s0017g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAAATAAAAGACCGCCCATTTTCCTTTCTGAACATTCAATTCATTCGTGTTTGAGTCC
CACGACAATGGCTTCCATCAACGCTTCTTGCCCAACAGCAGCTATTTCCCGTTTACGGGC
ATGCAAAAACTTCAAATTGTTTAATGGACTGCACGGTGTGAATCCCTCTTTGTCAAATTG
GTATACATCTGATTTGGCTTTGATTCGGTTGGGTAGCAAATCATCGTTCACTATCAAGGG
TGATGGTAGAACTAGAGCTACATTGATATCTGGAGAAGGTGGCCTCCTATCATACTCCAA
TGGCAATAATGTTGCTGCAATCACCAAGGACCAATCTGTTGGAATTGAGATACAGCCTGA
TGCAATAGCATTTGGAACGCTTGAAGCAGATACTGCTCCCGCAACTAATGGATTTCCCAT
TGATAATGATGAATTTGATCTGGATCGTCCCTCAGAAGGTTTTTCTTCCATTCCAGAGGC
CATTGAGGACATTCGTCAAGGAAAGATAGTGGTGGTTGTGGATGATGAAGATAGAGAAAA
TGAAGGGGACCTAATAATGGCAGCTTCACTGGCAACACCTGAAGCTATGGCATTTATTGT
GAAGCACGGGACTGGAATTGTTTGTGTGAGCATGAAAGGAGAAGATTTGGAGAGGTTGGA
AATTCCTTTGATGGTAACCCAAAAGGATAATGATGAGAAACTTTCTACTGCATTCACAGT
GTCAGTGGATGCAAAGCATGGTACAACCACTGGGGTTTCAGCTCGTGATAGGGCAACAAC
AATATTGGCTCTTGCATCCAGAGATTCAAAGCCTGAAGATTTCAATCGCCCAGGGCATAT
TTTTCCGTTGAAGTACAGGGAGGGTGGTGTTCTGAAAAGAGCTGGACATACAGAAGCCTC
TGTTGACCTTGCTATGCTAGCTGGCTTGGATCCTGTTGCAGTTTTATGTGAGGTTGTGGA
TGATGATGGTTCCATGGCGAGATTACCAAAGCTTCGCCAATTTGCAGAGAGAGAGAACTT
AAAAATCATATCAATTGCTGATTTAATCAGATATAGGCGGAAGAGAGATAAATTAGTGGA
TCGTTCTGCTGGGGCAAGGATACCTACAATGTGGGGGCCATTCACAGCATACTGCTATCG
GTCCATCTTAGATGGGATAGAACATATTGCTATGGTTAAGGGTGAGATTGGTGATGGGCA
AGATATTCTTGTGAGAGTACACTCGGAATGCCTCACAGGAGATATATTTGGGTCTGCTAG
ATGCGATTGTGGAAATCAGCTGGCACTTGCAATGCAACAGATTGAGAAAGCAGGGAAGGG
TGTATTGGTGTACCTCCGTGGGCATGAAGGAAGGGGCATTGGTTTGGGACACAAGCTTCA
TGCTTATAACCTGCAGGATGATGGACGTGATACTGTGGAAGCCAATGAAGAGCTGGGATT
GCCTGTTGATTCAAGAGAATACGGCATTGGTGCCCAGATGCTAAGAGATCTGGGTGTTCG
AACCATGAAGCTTATGACAAACAACCCTGCAAAGTACATTGGGCTCAAGGGCTATGGTTT
GGCAGTTTCTGGCAGAGTCCCACTTCTAACTCCCATTACAAAGGAGAACGGTAGATATTT
GGAGACAAAACGCTCTAAAATGGGACATGTCTATGGCTTAGAATTCAATGGTCATCTCAC
CAATCTTATCAGTGGGAATGGAAAACAGAGCATCAACACCCAACCTGATCCAGTCTCTGA
CTCGTAAGCATGGCAGATGGCGATGGACCCTCCAACTCCACAGCAAGGCGGCATGGGCAA
CAGCAGCTAAGGATAACGGATGAAATGTCTGGGCTCTGTTCATGCTCGACTCAAATTCTA
AACTAGCAATACATGTTCTGTCAACATTTGAAGTGAAAATTGGTTTCACTGTACTCTGAT
ATCTTCATTCTTTTCCTTCATGAAGTGTAAAATAGACAGGATAGAATTAAACCCTACTTA
TGGAATTTAGCTGGAGCCTTTGAAACATTCATTGCTCAGTCTTAGAGGCTCCCTAATTTT
TACAATTTGTGAACACACGGCTCATTGTTTCTTTTGAATGTGCAATGATGGACT