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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0234g00100.t01
CDS Infomation

cds chromosome:12X:2:125102:140102:1 gene:VIT_02s0234g00100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:D7T5I6]
Sequence

ATGGCAACACCAGATGAAAGTTCTTCTGCTAAGAAGTGGCTTCCTCTCGAAGCTAACCCC
GATGTTATGAACCAGTTCCTTTGGGGTCTTGGGCTTTTGGAAGATGAAGCAGAGTGTTAT
GATGTTTATGGTCTGGATGAAGAACTCTTAGCAATTGTTCCAAAGCCTGTCCTTGCTGTG
CTGTTTCTTTATCCCATTACTACACAGAGTGAAGAGGAGAGAATCCTGCAGGATAGTACA
AAAAGGGAGACTAGCAATAAAGTTTACTTCATGAGACAAACTGTGGGGAATGCTTGTGGA
ACAATTGGACTTCTCCATGCTATTGGGAATGTCACTTCAGAGATTAAGCTTGTTGAGGGA
TCGTTCTTGAATAGGTTTTTCAAATCCACTGCAAGCATGGACCCACTAGAGCGTGCAGCA
TACCTTGAGAATGACCAAGAAATGGAAGTTTCTCATTCGGTAGCAGCTACTGCTGGTGAT
ACAGAGGCTTCAACTAATGCGGATGCTCATTTTATCTGCTTCTCATGTGTGGATGGAGAA
CTTTATGAACTTGATGGACGGAAGTCAGGAGCAGTATCACATGGTCCATCCTCGCCCAGT
ACCTTATTGCAGGATGCAGCCAAGGTCATACAGGGTATAATCCAAAAAAATCCTGACTCG
ATCAACTTCAATGTCATCGCAATTTCAAAGAAACTTGAGGGACCCTACTAA

Peptide Sequence

PEP ID

VIT_02s0234g00100.t01
PEP Infomation

pep chromosome:12X:2:125102:140102:1 gene:VIT_02s0234g00100 transcript:VIT_02s0234g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:D7T5I6]
Sequence

MATPDESSSAKKWLPLEANPDVMNQFLWGLGLLEDEAECYDVYGLDEELLAIVPKPVLAV
LFLYPITTQSEEERILQDSTKRETSNKVYFMRQTVGNACGTIGLLHAIGNVTSEIKLVEG
SFLNRFFKSTASMDPLERAAYLENDQEMEVSHSVAATAGDTEASTNADAHFICFSCVDGE
LYELDGRKSGAVSHGPSSPSTLLQDAAKVIQGIIQKNPDSINFNVIAISKKLEGPY

Transcript Sequence

Transcript ID

VIT_02s0234g00100.t01
Transcript Infomation

cdna chromosome:12X:2:125102:140102:1 gene:VIT_02s0234g00100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:D7T5I6]
Sequence

GTTGCGAGAAAGAAGAAAAGAGAAAAAAAGTGATGGCAACACCAGATGAAAGTTCTTCTG
CTAAGAAGTGGCTTCCTCTCGAAGCTAACCCCGATGTTATGAACCAGTTCCTTTGGGGTC
TTGGGCTTTTGGAAGATGAAGCAGAGTGTTATGATGTTTATGGTCTGGATGAAGAACTCT
TAGCAATTGTTCCAAAGCCTGTCCTTGCTGTGCTGTTTCTTTATCCCATTACTACACAGA
GTGAAGAGGAGAGAATCCTGCAGGATAGTACAAAAAGGGAGACTAGCAATAAAGTTTACT
TCATGAGACAAACTGTGGGGAATGCTTGTGGAACAATTGGACTTCTCCATGCTATTGGGA
ATGTCACTTCAGAGATTAAGCTTGTTGAGGGATCGTTCTTGAATAGGTTTTTCAAATCCA
CTGCAAGCATGGACCCACTAGAGCGTGCAGCATACCTTGAGAATGACCAAGAAATGGAAG
TTTCTCATTCGGTAGCAGCTACTGCTGGTGATACAGAGGCTTCAACTAATGCGGATGCTC
ATTTTATCTGCTTCTCATGTGTGGATGGAGAACTTTATGAACTTGATGGACGGAAGTCAG
GAGCAGTATCACATGGTCCATCCTCGCCCAGTACCTTATTGCAGGATGCAGCCAAGGTCA
TACAGGGTATAATCCAAAAAAATCCTGACTCGATCAACTTCAATGTCATCGCAATTTCAA
AGAAACTTGAGGGACCCTACTAAGGAAGAAGCCCACTATGGATTTCCCCTTCAGAAGTTT
TAATTTGATCCAGTCATCCTTCGATTCAATAAGTAGACATTTGGATTTCTATTCTTCGTT
TATGTTCATGACATCTTGTGGGCATAGACAAGCCAACATAAAATCATCGGTAATACGTTG
AGGAGTCGAAATGAATGGCGGAGAGAATTATTCTGTTTTCGATTTGAAGCAATTATTACG
GGGTTTTGATCATCCCATATCGCT