Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0109g00360.t01
CDS Infomation

cds chromosome:12X:2:13004318:13007877:-1 gene:VIT_02s0109g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast [Source:UniProtKB/TrEMBL;Acc:D7SYM8]
Sequence

ATGGCATCCCAATTAATCCGTGAATGGACTGGGATTCAACAATTCCCCCCTGTTACACAG
ACCAAATTGATTGAACTGCTGGGAAAACTAAAGCAGGAGAATGTGAGCACATTGACAATC
CTTGTAATGGGGAAAGGTGGTGTTGGAAAATCTTCAACTGTAAACTCAATCATAGGGGAA
AGAGCAGTTGCTGTCAGTGCTTTTCAGTCAGAAGGACCAAGGCCTGTTATGGTTTCACGG
TCCCGAGCAGGATTCACATTGAACATTATTGACACACCAGGGCTTGTAGAAGGGGGATAT
GTCAATGATCAGGCACTTGAGATCATAAAACGATTTCTTCTAAACAAGACCATAGATGTT
CTACTCTATGTGGACCGATTAGATGCATATAGGGTAGACAACTTGGATAGGCAGGTTGTC
AAAGCTATAACTGATAGTTTTGGCAAAGAAATATGGCGAAGAGGTGTGGTTGTCCTTACA
CATGCTCAACTCTCTCCACCAGATGGGTTAAATTATGAGGATTTCTTCTCCAAAAGATCA
GAGGCTCTCATGAAAGTTGTTCGATCGGGAGCTCGGTTAAGGAAGCAGGATATCCAGGAT
TCTGGCATTCCTGTTGTTCTGGTCGAGAATAGTGGGAGATGTCATAAGAATGAAAGTGAT
GAAAAGATTCTGCCAAATGGAACTGCTTGGATCCCCAATTTAGTCAAAACAATCACAGAT
GCTGTGTCAAATGGAAGCAAGGGTATTTTGGTTGACAAGAAGTTGATTGAAGGGCCGAAC
CCAAACGAGAGAGGAAAGTTACTCATTCCTTTTATTTTAGCCTTCCAATACTTCTTTATC
GTGAAACGAATTCAACGGGCAATCAAAAGTGATATGGCAAAGGAGAGAAAAGCTCCATGG
GAGTCGCGGGAGGCCAACCGTTATGAACCTTGA

Peptide Sequence

PEP ID

VIT_02s0109g00360.t01
PEP Infomation

pep chromosome:12X:2:13004318:13007877:-1 gene:VIT_02s0109g00360 transcript:VIT_02s0109g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast [Source:UniProtKB/TrEMBL;Acc:D7SYM8]
Sequence

MASQLIREWTGIQQFPPVTQTKLIELLGKLKQENVSTLTILVMGKGGVGKSSTVNSIIGE
RAVAVSAFQSEGPRPVMVSRSRAGFTLNIIDTPGLVEGGYVNDQALEIIKRFLLNKTIDV
LLYVDRLDAYRVDNLDRQVVKAITDSFGKEIWRRGVVVLTHAQLSPPDGLNYEDFFSKRS
EALMKVVRSGARLRKQDIQDSGIPVVLVENSGRCHKNESDEKILPNGTAWIPNLVKTITD
AVSNGSKGILVDKKLIEGPNPNERGKLLIPFILAFQYFFIVKRIQRAIKSDMAKERKAPW
ESREANRYEP

Transcript Sequence

Transcript ID

VIT_02s0109g00360.t01
Transcript Infomation

cdna chromosome:12X:2:13004318:13007877:-1 gene:VIT_02s0109g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast [Source:UniProtKB/TrEMBL;Acc:D7SYM8]
Sequence

GAATCCATGGCATCCCAATTAATCCGTGAATGGACTGGGATTCAACAATTCCCCCCTGTT
ACACAGACCAAATTGATTGAACTGCTGGGAAAACTAAAGCAGGAGAATGTGAGCACATTG
ACAATCCTTGTAATGGGGAAAGGTGGTGTTGGAAAATCTTCAACTGTAAACTCAATCATA
GGGGAAAGAGCAGTTGCTGTCAGTGCTTTTCAGTCAGAAGGACCAAGGCCTGTTATGGTT
TCACGGTCCCGAGCAGGATTCACATTGAACATTATTGACACACCAGGGCTTGTAGAAGGG
GGATATGTCAATGATCAGGCACTTGAGATCATAAAACGATTTCTTCTAAACAAGACCATA
GATGTTCTACTCTATGTGGACCGATTAGATGCATATAGGGTAGACAACTTGGATAGGCAG
GTTGTCAAAGCTATAACTGATAGTTTTGGCAAAGAAATATGGCGAAGAGGTGTGGTTGTC
CTTACACATGCTCAACTCTCTCCACCAGATGGGTTAAATTATGAGGATTTCTTCTCCAAA
AGATCAGAGGCTCTCATGAAAGTTGTTCGATCGGGAGCTCGGTTAAGGAAGCAGGATATC
CAGGATTCTGGCATTCCTGTTGTTCTGGTCGAGAATAGTGGGAGATGTCATAAGAATGAA
AGTGATGAAAAGATTCTGCCAAATGGAACTGCTTGGATCCCCAATTTAGTCAAAACAATC
ACAGATGCTGTGTCAAATGGAAGCAAGGGTATTTTGGTTGACAAGAAGTTGATTGAAGGG
CCGAACCCAAACGAGAGAGGAAAGTTACTCATTCCTTTTATTTTAGCCTTCCAATACTTC
TTTATCGTGAAACGAATTCAACGGGCAATCAAAAGTGATATGGCAAAGGAGAGAAAAGCT
CCATGGGAGTCGCGGGAGGCCAACCGTTATGAACCTTGATCGTGGTAAAACTTTTTGGAA
TGTGTTTTTGTTCCTTTTTGGTACTAGTTGTAATACAAGTTATCTCGGGAGCTTGATTTT
ATGTTTTGAGAGGTGGTTTTTGTGCACTCCTGCCCTACTCATGTATTTTCATCTGGATAG
TTGAGATTTTCTTCAAGTTTCATTTCTCATC