Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0087g00840.t01
CDS Infomation

cds chromosome:12X:2:18431575:18434854:-1 gene:VIT_02s0087g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCCTCAACTGCATAGCCCCAAAACCGGAAAATCAAGGCAACATCCCCATGGAAGGT
TTGTCCAGGACATCTGAATCCGACAACTCAGCCGTCCTTACCTACCCCATGCAAACCAAT
TCACAATCTATTCTACAACACACCTTGTACTCCATAAATCTCAAGTTTGAAGAGGTCGTT
TACAAAGTTAAATTAGAGCAGAAAGGGTTTTGCTGGGGGGGTGCATGGAGCACCAGAGAC
AAGACAATACTGAATGGAATAACAGGCATGGTTTGTCCAGGAGAGATACTAGCGATGTTA
GGGCCATCTGGGAGCGGCAAAACCACACTCCTTACAGCCCTTGGAGGCCGTCTCAATGGT
AAGTTATCAGGCAAGATCACGTACAATGGTCAGCCTTTCTCTGGCGCTGTCAAACGAAGA
ACAGGATTTGTTGCACAGGACGATGTTCTCTACCCGCATCTTACTGTAACTGAAACCCTC
CTATTCACTGCACTGCTAAGGCTGCCAAAAAGCTTGGCACGAAATGAGAAAGCCCAGCAT
GTGGAGAGGGTCATCTCTGAGTTGGGATTAACACGGTGTCGGAACAGCATGATTGGGGGA
CCTCTCTTTAGGGGCATATCAGGTGGGGAGAAGAAGAGGGTGAGCATAGGCCAAGAAATG
CTAATCAACCCAAGCTTGCTGTTGCTAGATGAGCCCACCTCAGGTTTGGACTCGACCACT
GCTCAACGGATCCTAACCACCATTAAACGACTGGCTAGTGGGGGTAGAACCGTGGTCACC
ACTATTCACCAGCCCTCAAGCCGCCTCTACCACATGTTTGATAAGGTAATCTTGCTTTCT
GAGGGCTGCCCCATCTACAATGGTCCTGCATCAACTGCCATGGAATACTTCTCCTCAGTT
GGTTTCTCCACATGCGTGACTGTCAATCCAGCTGATCTCTTACTCGATCTTGCTAACGGA
ATTAGCCCTGATTCCAAGCAAGCAGCGGAGCAAAGTGAGAACATGGAACAAGAGCAGAAG
TCAGTGAGAGAAGCTCTCATCTCCGCCTATGAAAAGAACATTTCTACTAGGCTGAAAGCC
GAGCTCTGCAGTGTGGATGTCAATAACTACAATTATACAAAGGACGGTCGTGCAAGAAAT
AACTTCAAGGCAGATCAATGGTGCACAAGCTGGTGGCATCAGTTCATGGTGCTGCTTCAG
AGGGGACTAAGGGAAAGGAGGTACGAAGCCTTCAACAGGCTAAGAATCTTCCAAGTCATA
AGTGTCGCTGTGCTAGGCGGTCTTCTATGGTGGCACACCCCAACATCCCACATTGAGGAT
CGAATAGCCCTGCTCTTCTTCTTCTCTGTGTTCTGGGGGTTCTACCCACTCTACAATGCA
GTCTTTACATTTCCCCAAGAAAGAAGAATGCTGATCAAGGAACGATCATCTGGCATGTAC
CGCCTTTCATCATACTTTCTAGCCAGAACTTTTGGAGACCTGCCACTTGAGCTTGCTCTC
CCAACAGCCTTTGTCATCATAATCTACTGGATGGGTGGACTAAAACCTGATCCCATCACT
TTCATCCTTTCTCTTCTTGTCGTTCTCTACAATGTCCTTGTCTCCCAAAGTCTGGGCTTA
GCCATTGGCGCAATACTGATGGACATAAAACAAGCAACTACTTTAGCCTCTGTTACAACC
CTAGTGTTCCTGATCGCGGGCGGATACTATGTGCAACAAATCCCTCCCTTCATTGTCTGG
CTAAAGTACTTGAGCTATAGCTACTACTGCTATAAGCTTCTCCTCGGGATACAGTACAGC
GAGGATGACTACTACGAGTGCTCCAAGGGGGTGTTTTGTCGGGTTGTAGATTTTCCTGCA
GTCAAATCCGTGGGGCTCAACCATTTGTGGATTGATGTGTGCATTATGGCCCTGATGTTG
GTGGGGTATCGACTTGTTGCTTATCTGGCATTGCATCGGGTACAGTTGAGGTGA

Peptide Sequence

PEP ID

VIT_02s0087g00840.t01
PEP Infomation

pep chromosome:12X:2:18431575:18434854:-1 gene:VIT_02s0087g00840 transcript:VIT_02s0087g00840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPLNCIAPKPENQGNIPMEGLSRTSESDNSAVLTYPMQTNSQSILQHTLYSINLKFEEVV
YKVKLEQKGFCWGGAWSTRDKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNG
KLSGKITYNGQPFSGAVKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPKSLARNEKAQH
VERVISELGLTRCRNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTT
AQRILTTIKRLASGGRTVVTTIHQPSSRLYHMFDKVILLSEGCPIYNGPASTAMEYFSSV
GFSTCVTVNPADLLLDLANGISPDSKQAAEQSENMEQEQKSVREALISAYEKNISTRLKA
ELCSVDVNNYNYTKDGRARNNFKADQWCTSWWHQFMVLLQRGLRERRYEAFNRLRIFQVI
SVAVLGGLLWWHTPTSHIEDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMY
RLSSYFLARTFGDLPLELALPTAFVIIIYWMGGLKPDPITFILSLLVVLYNVLVSQSLGL
AIGAILMDIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGIQYS
EDDYYECSKGVFCRVVDFPAVKSVGLNHLWIDVCIMALMLVGYRLVAYLALHRVQLR

Transcript Sequence

Transcript ID

VIT_02s0087g00840.t01
Transcript Infomation

cdna chromosome:12X:2:18431575:18434854:-1 gene:VIT_02s0087g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATGCCCCTCAACTGCATAGCCCCAAAACCGGAAAATCAAGGCAACATCCCCATGGAAG
GTTTGTCCAGGACATCTGAATCCGACAACTCAGCCGTCCTTACCTACCCCATGCAAACCA
ATTCACAATCTATTCTACAACACACCTTGTACTCCATAAATCTCAAGTTTGAAGAGGTCG
TTTACAAAGTTAAATTAGAGCAGAAAGGGTTTTGCTGGGGGGGTGCATGGAGCACCAGAG
ACAAGACAATACTGAATGGAATAACAGGCATGGTTTGTCCAGGAGAGATACTAGCGATGT
TAGGGCCATCTGGGAGCGGCAAAACCACACTCCTTACAGCCCTTGGAGGCCGTCTCAATG
GTAAGTTATCAGGCAAGATCACGTACAATGGTCAGCCTTTCTCTGGCGCTGTCAAACGAA
GAACAGGATTTGTTGCACAGGACGATGTTCTCTACCCGCATCTTACTGTAACTGAAACCC
TCCTATTCACTGCACTGCTAAGGCTGCCAAAAAGCTTGGCACGAAATGAGAAAGCCCAGC
ATGTGGAGAGGGTCATCTCTGAGTTGGGATTAACACGGTGTCGGAACAGCATGATTGGGG
GACCTCTCTTTAGGGGCATATCAGGTGGGGAGAAGAAGAGGGTGAGCATAGGCCAAGAAA
TGCTAATCAACCCAAGCTTGCTGTTGCTAGATGAGCCCACCTCAGGTTTGGACTCGACCA
CTGCTCAACGGATCCTAACCACCATTAAACGACTGGCTAGTGGGGGTAGAACCGTGGTCA
CCACTATTCACCAGCCCTCAAGCCGCCTCTACCACATGTTTGATAAGGTAATCTTGCTTT
CTGAGGGCTGCCCCATCTACAATGGTCCTGCATCAACTGCCATGGAATACTTCTCCTCAG
TTGGTTTCTCCACATGCGTGACTGTCAATCCAGCTGATCTCTTACTCGATCTTGCTAACG
GAATTAGCCCTGATTCCAAGCAAGCAGCGGAGCAAAGTGAGAACATGGAACAAGAGCAGA
AGTCAGTGAGAGAAGCTCTCATCTCCGCCTATGAAAAGAACATTTCTACTAGGCTGAAAG
CCGAGCTCTGCAGTGTGGATGTCAATAACTACAATTATACAAAGGACGGTCGTGCAAGAA
ATAACTTCAAGGCAGATCAATGGTGCACAAGCTGGTGGCATCAGTTCATGGTGCTGCTTC
AGAGGGGACTAAGGGAAAGGAGGTACGAAGCCTTCAACAGGCTAAGAATCTTCCAAGTCA
TAAGTGTCGCTGTGCTAGGCGGTCTTCTATGGTGGCACACCCCAACATCCCACATTGAGG
ATCGAATAGCCCTGCTCTTCTTCTTCTCTGTGTTCTGGGGGTTCTACCCACTCTACAATG
CAGTCTTTACATTTCCCCAAGAAAGAAGAATGCTGATCAAGGAACGATCATCTGGCATGT
ACCGCCTTTCATCATACTTTCTAGCCAGAACTTTTGGAGACCTGCCACTTGAGCTTGCTC
TCCCAACAGCCTTTGTCATCATAATCTACTGGATGGGTGGACTAAAACCTGATCCCATCA
CTTTCATCCTTTCTCTTCTTGTCGTTCTCTACAATGTCCTTGTCTCCCAAAGTCTGGGCT
TAGCCATTGGCGCAATACTGATGGACATAAAACAAGCAACTACTTTAGCCTCTGTTACAA
CCCTAGTGTTCCTGATCGCGGGCGGATACTATGTGCAACAAATCCCTCCCTTCATTGTCT
GGCTAAAGTACTTGAGCTATAGCTACTACTGCTATAAGCTTCTCCTCGGGATACAGTACA
GCGAGGATGACTACTACGAGTGCTCCAAGGGGGTGTTTTGTCGGGTTGTAGATTTTCCTG
CAGTCAAATCCGTGGGGCTCAACCATTTGTGGATTGATGTGTGCATTATGGCCCTGATGT
TGGTGGGGTATCGACTTGTTGCTTATCTGGCATTGCATCGGGTACAGTTGAGGTGAGTCT
AGCAGAGTACCCATCACTCATCACCCTTTACCCATTACATCAAACAAGGCAGTTCGAAGA
GTTTTCTCCTTCTTCAACTGAGGAATAATGTTAGATTTTAGATGGAAATCATGTTCCATT
TCCACCATTTTCACTCAGAAGACTTGGATATGTACTA