Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0087g00600.t01
CDS Infomation

cds chromosome:12X:2:18028233:18030254:-1 gene:VIT_02s0087g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGAAAGCCAGACAAACCCTAAACCAAAAGAAATCTCCCCGGACGCCAAAACCCTC
CTCCAAATCATTTCCGCCACCGCCCCCCACGCCCTCGTCGCCGCCCTCTCCGCCACCTCC
ATCCCCCCAACCCCGGACGTCGTCCAAGACGTCCTCCGCCTTTCCTACTCCAACTCCTCA
GCTGCCGTCGAGTTCTTCCGTTGGGCGGGCCTCACGCGTAAGCACTCCGCTCACTCATGG
AACCTCATCGTCGACCTACTCGGCAAGAACTCCAAGTTCGAGCCCATGTGGGACGCAATT
CGGTCCATGAGGAATGAGGGTGCGTTGTCGTTGTCCGCTTTTATTTCTGTTTTCGGAAGC
TATTGCTCCGTCGGCAGGGTTAATGAGGCGATTATGAGCTTTGAGGTTATGGACAGGTAT
GGAATTCCACCGGATGTGGCAGCAATGAATGCTCTATTAAGTGCCATTTGCTGCGAGGGT
GGCTCAACTACACTGGCGCTTGAATTCTTTGAGAAAATCAAAGTGAAGATTACACCAGAT
GGTGATACTTTCATGATCTTGTTGGAGGGGTGGGAGAGAGAAGGCAACGTGACAAAGGCG
AAGAGTACTTTTGGGGAAATGGTGGTTCGACTTGGTTGGAGTCCGCAAAATATGGTGGCT
TACAACTCGGTTTTGATGACACTTGTTCGAGGAATGGAGGTGGAGGAGGCAATCAAGTTT
CTTCTAGTGATGAAAGGGAAGGGTTGCTTGCCAGGTTTGAAATTCTTCTCTAATGCTCTT
GATGTTCTCCTTAAGCAGAATGATTCAACTCATGCAATTGCTTTGTGGGACATAATGTTG
GATGGTGGTTTCATGCCAAATTTGATGATGTATAATACCATAATTGGTATACTCTGCAAT
GCTGGTGATGCTGATAACGCATTTCGGTTTTTGGATGAGATGGTTTTCTATGGTGTGTTT
GCTGATTCTTTCACGTATAACATGATTTTTCAATGTCTTGTTAAGCATAAGAAGGTTCAT
GAAGCGGGAAAGTTCTTCATCGAAATGATCAAGAATGAATGTCCTCCAATGCCTTCTAAT
TGTGCTGCTGCTATTGCAATGTGTTTTGATGGTGATGACCCGGAGATGGCAATTGAGATT
TGGAGCTATATGATTGAGAACTCACTCTCTCCTGTTGACGAGAGTGCAAATGCATTGCTT
ATTGGGCTTTGTAATTTGCGTAGGTTTTCTGATTACAGGAGGTTTGCAGAAGATATGCTT
GATATGAAGATTAAAATTCATGAGTCAACCATGGAAAAACTGAAGAATGCACGCTACAAA
GATGGTAGAAGTGCAAGAGATACATGTGATAGTTTATGGAAAAGGTGGAAAGTATCTCAA
GATTCTGTTTTATGA

Peptide Sequence

PEP ID

VIT_02s0087g00600.t01
PEP Infomation

pep chromosome:12X:2:18028233:18030254:-1 gene:VIT_02s0087g00600 transcript:VIT_02s0087g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAESQTNPKPKEISPDAKTLLQIISATAPHALVAALSATSIPPTPDVVQDVLRLSYSNSS
AAVEFFRWAGLTRKHSAHSWNLIVDLLGKNSKFEPMWDAIRSMRNEGALSLSAFISVFGS
YCSVGRVNEAIMSFEVMDRYGIPPDVAAMNALLSAICCEGGSTTLALEFFEKIKVKITPD
GDTFMILLEGWEREGNVTKAKSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKF
LLVMKGKGCLPGLKFFSNALDVLLKQNDSTHAIALWDIMLDGGFMPNLMMYNTIIGILCN
AGDADNAFRFLDEMVFYGVFADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSN
CAAAIAMCFDGDDPEMAIEIWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDML
DMKIKIHESTMEKLKNARYKDGRSARDTCDSLWKRWKVSQDSVL

Transcript Sequence

Transcript ID

VIT_02s0087g00600.t01
Transcript Infomation

cdna chromosome:12X:2:18028233:18030254:-1 gene:VIT_02s0087g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGTGATGTCCTTCTCTCTGAATTCCTAGAAATTGGAAGCCATGGCTGAAAGCCAGACA
AACCCTAAACCAAAAGAAATCTCCCCGGACGCCAAAACCCTCCTCCAAATCATTTCCGCC
ACCGCCCCCCACGCCCTCGTCGCCGCCCTCTCCGCCACCTCCATCCCCCCAACCCCGGAC
GTCGTCCAAGACGTCCTCCGCCTTTCCTACTCCAACTCCTCAGCTGCCGTCGAGTTCTTC
CGTTGGGCGGGCCTCACGCGTAAGCACTCCGCTCACTCATGGAACCTCATCGTCGACCTA
CTCGGCAAGAACTCCAAGTTCGAGCCCATGTGGGACGCAATTCGGTCCATGAGGAATGAG
GGTGCGTTGTCGTTGTCCGCTTTTATTTCTGTTTTCGGAAGCTATTGCTCCGTCGGCAGG
GTTAATGAGGCGATTATGAGCTTTGAGGTTATGGACAGGTATGGAATTCCACCGGATGTG
GCAGCAATGAATGCTCTATTAAGTGCCATTTGCTGCGAGGGTGGCTCAACTACACTGGCG
CTTGAATTCTTTGAGAAAATCAAAGTGAAGATTACACCAGATGGTGATACTTTCATGATC
TTGTTGGAGGGGTGGGAGAGAGAAGGCAACGTGACAAAGGCGAAGAGTACTTTTGGGGAA
ATGGTGGTTCGACTTGGTTGGAGTCCGCAAAATATGGTGGCTTACAACTCGGTTTTGATG
ACACTTGTTCGAGGAATGGAGGTGGAGGAGGCAATCAAGTTTCTTCTAGTGATGAAAGGG
AAGGGTTGCTTGCCAGGTTTGAAATTCTTCTCTAATGCTCTTGATGTTCTCCTTAAGCAG
AATGATTCAACTCATGCAATTGCTTTGTGGGACATAATGTTGGATGGTGGTTTCATGCCA
AATTTGATGATGTATAATACCATAATTGGTATACTCTGCAATGCTGGTGATGCTGATAAC
GCATTTCGGTTTTTGGATGAGATGGTTTTCTATGGTGTGTTTGCTGATTCTTTCACGTAT
AACATGATTTTTCAATGTCTTGTTAAGCATAAGAAGGTTCATGAAGCGGGAAAGTTCTTC
ATCGAAATGATCAAGAATGAATGTCCTCCAATGCCTTCTAATTGTGCTGCTGCTATTGCA
ATGTGTTTTGATGGTGATGACCCGGAGATGGCAATTGAGATTTGGAGCTATATGATTGAG
AACTCACTCTCTCCTGTTGACGAGAGTGCAAATGCATTGCTTATTGGGCTTTGTAATTTG
CGTAGGTTTTCTGATTACAGGAGGTTTGCAGAAGATATGCTTGATATGAAGATTAAAATT
CATGAGTCAACCATGGAAAAACTGAAGAATGCACGCTACAAAGATGGTAGAAGTGCAAGA
GATACATGTGATAGTTTATGGAAAAGGTGGAAAGTATCTCAAGATTCTGTTTTATGAACT
TGTTTTTTTCTTTTTTCTTTTTGGCGGGATTTGGATGCCCTGCCTTTTGTTTTGATAATG
TTTGCGAACATCTTTGATGTGTGGCAATCATGAATGGAAAAATCTTTCATAACAAGCAGA
TTTTACCATTTCTTGGTTGTGCTACTTTAGTTTTAAATCCCCATTTTGA