Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0087g00400.t01
CDS Infomation

cds chromosome:12X:2:17728505:17733205:1 gene:VIT_02s0087g00400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:D7TFE6]
Sequence

ATGGCTAAAGCAAGAACAGGCCACTGGTTAAGCATTCTGGCATTTTCACTGATCTTGCTC
AAAACAGAAGGCTTCTATGTGGGAATTACTTATGTGGATAGTGCAGTAGCAAAAGGAGCA
GTTTGCTTGGATGGTAGCCCACCTGCTTACCACATGGATAAGGGATTTGGTGCAGGGATT
AACAATTGGTTGGTTCATATTGAGGGAGGAGGATGGTGCAACAATGCCTCAACTTGCCTT
GCTCGTAGGGACAACCGTTTAGGTTCATCGAAGCAAATGGTGAAGCAAATTGCTTTCTCT
GGGATTCTGAGCAACAAGCAAAAATTTAATCCGGACTTCTACAACTGGAACAAGATCAAG
GTTAGGTACTGCGATGGGGCCTCCTTTACGGGCGATGTAGAAGCAGTTGATCCTAAGACT
AATCTTCACTACAGAGGAGCCCGGGTGTTTCTTGCTGTCATTGAGGATCTTATGGCAAAA
GGAATGAAAAATGCTGCAAATGCTGTTCTCTCTGGCTGCTCTGCTGGTGGGCTGACTGCC
ATTCTGCATTGTGATAAATTTCGCGCTCTTCTCCCTGTCAGCACCAAAGTAAAATGCTTT
GCAGATGCCGGTTACTTCATCAACGCTAAGGATGTTTCAGGAGCAGCACACATTGAAGGC
TTCTACAGTGAAGTGGTTGCAACACATGGATCAGCAAAGAATCTGCCCCCATCCTGCACT
TCAAGTCTAAGACCGGGCTTGTGTTTCTTCCCACAAAACATGGCTCAACAGATCAAAACA
CCGCTTTTTATCATCAATGCAGCCTATGATTCATGGCAGATAAAGAACATCTTGGCACCG
GGTGTCGCTGATCCTCATGGTACTTGGCATTACTGCAAGCTTGATATCAAGGACTGCTCA
TCCTCCCAACTTGAAGCCATGCAAGATTTCAGGGTGCAGTTTCTTAGTGCAATCAAAGGA
CTGATAGGCTCCCCCTCCAAAGGAATGTTCATAAACTCCTGCTATGCCCACTGCCAAACC
GAAATGCAGGAAACATGGCTGAGGGACGACTCCCCAGTACTTGGAAAAACAACAATTGCA
AAGGCAGTAGGAGACTGGTACTATGACCGGAGTCCATTCCAGAAGATAGATTGTGCCTAC
CCTTGTGACTCTACTTGCCATAACCGGGTTTTTGATCCTCACGAACACCCAGAATTATAG

Peptide Sequence

PEP ID

VIT_02s0087g00400.t01
PEP Infomation

pep chromosome:12X:2:17728505:17733205:1 gene:VIT_02s0087g00400 transcript:VIT_02s0087g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:D7TFE6]
Sequence

MAKARTGHWLSILAFSLILLKTEGFYVGITYVDSAVAKGAVCLDGSPPAYHMDKGFGAGI
NNWLVHIEGGGWCNNASTCLARRDNRLGSSKQMVKQIAFSGILSNKQKFNPDFYNWNKIK
VRYCDGASFTGDVEAVDPKTNLHYRGARVFLAVIEDLMAKGMKNAANAVLSGCSAGGLTA
ILHCDKFRALLPVSTKVKCFADAGYFINAKDVSGAAHIEGFYSEVVATHGSAKNLPPSCT
SSLRPGLCFFPQNMAQQIKTPLFIINAAYDSWQIKNILAPGVADPHGTWHYCKLDIKDCS
SSQLEAMQDFRVQFLSAIKGLIGSPSKGMFINSCYAHCQTEMQETWLRDDSPVLGKTTIA
KAVGDWYYDRSPFQKIDCAYPCDSTCHNRVFDPHEHPEL

Transcript Sequence

Transcript ID

VIT_02s0087g00400.t01
Transcript Infomation

cdna chromosome:12X:2:17728505:17733205:1 gene:VIT_02s0087g00400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:D7TFE6]
Sequence

GCGGGAGCTCTCACCAGTCACCGCATTGTTATAAGCACTTGTTTGAAGCTCGTTTTCTGC
GTCAGAAGCTCACAATCTGAACTGGGTTGGGTTTAGATTCTGTGGCGAAAAGGGGAGTCT
TCTCCTCTCGCAGTATCAGAATGGCTAAAGCAAGAACAGGCCACTGGTTAAGCATTCTGG
CATTTTCACTGATCTTGCTCAAAACAGAAGGCTTCTATGTGGGAATTACTTATGTGGATA
GTGCAGTAGCAAAAGGAGCAGTTTGCTTGGATGGTAGCCCACCTGCTTACCACATGGATA
AGGGATTTGGTGCAGGGATTAACAATTGGTTGGTTCATATTGAGGGAGGAGGATGGTGCA
ACAATGCCTCAACTTGCCTTGCTCGTAGGGACAACCGTTTAGGTTCATCGAAGCAAATGG
TGAAGCAAATTGCTTTCTCTGGGATTCTGAGCAACAAGCAAAAATTTAATCCGGACTTCT
ACAACTGGAACAAGATCAAGGTTAGGTACTGCGATGGGGCCTCCTTTACGGGCGATGTAG
AAGCAGTTGATCCTAAGACTAATCTTCACTACAGAGGAGCCCGGGTGTTTCTTGCTGTCA
TTGAGGATCTTATGGCAAAAGGAATGAAAAATGCTGCAAATGCTGTTCTCTCTGGCTGCT
CTGCTGGTGGGCTGACTGCCATTCTGCATTGTGATAAATTTCGCGCTCTTCTCCCTGTCA
GCACCAAAGTAAAATGCTTTGCAGATGCCGGTTACTTCATCAACGCTAAGGATGTTTCAG
GAGCAGCACACATTGAAGGCTTCTACAGTGAAGTGGTTGCAACACATGGATCAGCAAAGA
ATCTGCCCCCATCCTGCACTTCAAGTCTAAGACCGGGCTTGTGTTTCTTCCCACAAAACA
TGGCTCAACAGATCAAAACACCGCTTTTTATCATCAATGCAGCCTATGATTCATGGCAGA
TAAAGAACATCTTGGCACCGGGTGTCGCTGATCCTCATGGTACTTGGCATTACTGCAAGC
TTGATATCAAGGACTGCTCATCCTCCCAACTTGAAGCCATGCAAGATTTCAGGGTGCAGT
TTCTTAGTGCAATCAAAGGACTGATAGGCTCCCCCTCCAAAGGAATGTTCATAAACTCCT
GCTATGCCCACTGCCAAACCGAAATGCAGGAAACATGGCTGAGGGACGACTCCCCAGTAC
TTGGAAAAACAACAATTGCAAAGGCAGTAGGAGACTGGTACTATGACCGGAGTCCATTCC
AGAAGATAGATTGTGCCTACCCTTGTGACTCTACTTGCCATAACCGGGTTTTTGATCCTC
ACGAACACCCAGAATTATAGACAGAACCCATCCAAAACTATAGATATTCTTGATGAACAA
GGAGGAAGAAAAAATCCTCAGTGATTGATCAAGTCTTTAAAATAAGCTAAGGCCATCACT
GCACTGAAAAAATATGTGCAGGGTGTCTTCTGTTAGTGTTTATGGAATGACTTATTATTA
TTATTATTATTATTCCATCAATAAAATCAATATATTCCATCTTAGA