Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0087g00340.t01
CDS Infomation

cds chromosome:12X:2:17609691:17614793:-1 gene:VIT_02s0087g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGGACAGTCCAGAAAATGGATGATCCTTGTGGCAACCATATGGATTCAGGCGTTT
ACAGGGACGAATTTTGATTTCTCGGCCTACTCGTCGGAGCTGAAGACGGTGTTGGGGGTG
TCTCAGGTGCAGTTGAACTATTTGGCGACGGCGTCGGATTTAGGGAAACTGTTTGGGTGG
TCTTCTGGGCTGGCTTTGATGTATATGCCATTGTGGGTTGTGATGTTCATGTCTGCTTTC
ATGGGGTTTTTTGCGTATGGCCTTCAGTGGCTTGTTATCAGGAGTATCATTACCTTGCCA
TACTTTCTGGTGTTTCTTCTATGTTTATTAGCTGGCTGCAGCATCTGTTGGTTCAACACA
GTGTGCTTTGTTCTTTGTACTCAGAATTTCCCTGCAAATCGCCCTCTTGCAATCTCTCTC
ACCGTCAGCTTCAATGGCGTAAGCGCAGCACTATATGCCCTTGCTGCCGATGCCATTAAC
CCTTCTTCAGATTCACTGTATCTTCTTCTGAATGCCGTAATTCCTCTTCTCACTTCCATT
GTTGCCCTTCCCCCAATCCTCCGCCAACCCTCTTTAGACCCTCTTCCTCCTGATGCCGTT
CGCCGCGACTCCCTTATATTCCTCATACTGAATTTCTTGGCTGTCCTCACAGGCGTCTAT
CTCCTTCTCATTAGCTCAATTTCATCCAATGCAACAACATCTCGTCTCCTCTTTTCTGGG
GCCATTTTTCTTCTTGTCCTCCCCATATGTATCCCTGGTGTTGTTTATGCTAAGAACTGG
TTTCGGAGAACCGTCAATTCTAGCTTCCGCCTTGATGGCTCTGGCTTCATTCTTGTGGAT
GCTGATGATCTTGAGCTTCACAAAGAGCTCATCACACGATCAGGCAGTGGCTATGGGAAT
GGAATTTCTGATATTATCAAGAGCAATGGATCTACTCATGAAATTGTTCGATACAATAGC
GTAGAACGTGAAAGTTGTTGTGAGAAATTGATGGGAAAAGATCAGTTGGTAATGCTTGGA
GAAGAACATCGAGCTCGTATGCTTGTTCGTAGGTTGGATTTTTGGCTATACTACATTGCT
TACTTCTGCGGGGGAACGATAGGGCTGGTGTATAGTAACAACCTAGGGCAGATTGCACAG
TCTCTTGGCAATAGCTCTGACACTTCAGCTCTAATCACTATCTATTCTGCCTTCTCCTAC
TTTGGCCGCTTGCTTTCTGCCGCTCCTGATTACATGCGTGCGAAGGTCTACTTTGCAAGA
ACCGGGTGGCTTAGTATAGCGCTTCTGCCAACCCCAGTTGCCTTCTTCTTGCTTGCGGCA
TCAGGCAGCAGCGGCAGCATCTTGCACGCAAGCACCGCACTGGTAGGGCTAAGCTCAGGG
TTCATATTTGCCGCGGCTGTTTCAATAACATCAGAGCTGTTTGGACCCAATAGCGTGGGA
GTCAACCACAACATTCTCATCACCAACATACCAATAGGCTCCCTTGTGTATGGCATGCTT
GCTGCAATAATCTATGATGCCAACATAGGCTCCAGCTTAAGAATGGTTACTGATACAGCA
GTGTGTATGGGTACGAGATGTTATTTCTTGACGTTTGTCTTGTGGGGAAGCCTCTCAGTT
ATAGGGCTAGTGTGCAGTGTGCTTCTATTCTTGAGAACTAGACATGCATATGATCGGTTT
GAACACAATCGGATTTCATCGCAACTGTATTAA

Peptide Sequence

PEP ID

VIT_02s0087g00340.t01
PEP Infomation

pep chromosome:12X:2:17609691:17614793:-1 gene:VIT_02s0087g00340 transcript:VIT_02s0087g00340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGQSRKWMILVATIWIQAFTGTNFDFSAYSSELKTVLGVSQVQLNYLATASDLGKLFGW
SSGLALMYMPLWVVMFMSAFMGFFAYGLQWLVIRSIITLPYFLVFLLCLLAGCSICWFNT
VCFVLCTQNFPANRPLAISLTVSFNGVSAALYALAADAINPSSDSLYLLLNAVIPLLTSI
VALPPILRQPSLDPLPPDAVRRDSLIFLILNFLAVLTGVYLLLISSISSNATTSRLLFSG
AIFLLVLPICIPGVVYAKNWFRRTVNSSFRLDGSGFILVDADDLELHKELITRSGSGYGN
GISDIIKSNGSTHEIVRYNSVERESCCEKLMGKDQLVMLGEEHRARMLVRRLDFWLYYIA
YFCGGTIGLVYSNNLGQIAQSLGNSSDTSALITIYSAFSYFGRLLSAAPDYMRAKVYFAR
TGWLSIALLPTPVAFFLLAASGSSGSILHASTALVGLSSGFIFAAAVSITSELFGPNSVG
VNHNILITNIPIGSLVYGMLAAIIYDANIGSSLRMVTDTAVCMGTRCYFLTFVLWGSLSV
IGLVCSVLLFLRTRHAYDRFEHNRISSQLY

Transcript Sequence

Transcript ID

VIT_02s0087g00340.t01
Transcript Infomation

cdna chromosome:12X:2:17609691:17614793:-1 gene:VIT_02s0087g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTATCATGGCTGGACAGTCCAGAAAATGGATGATCCTTGTGGCAACCATATGGATTCAGG
CGTTTACAGGGACGAATTTTGATTTCTCGGCCTACTCGTCGGAGCTGAAGACGGTGTTGG
GGGTGTCTCAGGTGCAGTTGAACTATTTGGCGACGGCGTCGGATTTAGGGAAACTGTTTG
GGTGGTCTTCTGGGCTGGCTTTGATGTATATGCCATTGTGGGTTGTGATGTTCATGTCTG
CTTTCATGGGGTTTTTTGCGTATGGCCTTCAGTGGCTTGTTATCAGGAGTATCATTACCT
TGCCATACTTTCTGGTGTTTCTTCTATGTTTATTAGCTGGCTGCAGCATCTGTTGGTTCA
ACACAGTGTGCTTTGTTCTTTGTACTCAGAATTTCCCTGCAAATCGCCCTCTTGCAATCT
CTCTCACCGTCAGCTTCAATGGCGTAAGCGCAGCACTATATGCCCTTGCTGCCGATGCCA
TTAACCCTTCTTCAGATTCACTGTATCTTCTTCTGAATGCCGTAATTCCTCTTCTCACTT
CCATTGTTGCCCTTCCCCCAATCCTCCGCCAACCCTCTTTAGACCCTCTTCCTCCTGATG
CCGTTCGCCGCGACTCCCTTATATTCCTCATACTGAATTTCTTGGCTGTCCTCACAGGCG
TCTATCTCCTTCTCATTAGCTCAATTTCATCCAATGCAACAACATCTCGTCTCCTCTTTT
CTGGGGCCATTTTTCTTCTTGTCCTCCCCATATGTATCCCTGGTGTTGTTTATGCTAAGA
ACTGGTTTCGGAGAACCGTCAATTCTAGCTTCCGCCTTGATGGCTCTGGCTTCATTCTTG
TGGATGCTGATGATCTTGAGCTTCACAAAGAGCTCATCACACGATCAGGCAGTGGCTATG
GGAATGGAATTTCTGATATTATCAAGAGCAATGGATCTACTCATGAAATTGTTCGATACA
ATAGCGTAGAACGTGAAAGTTGTTGTGAGAAATTGATGGGAAAAGATCAGTTGGTAATGC
TTGGAGAAGAACATCGAGCTCGTATGCTTGTTCGTAGGTTGGATTTTTGGCTATACTACA
TTGCTTACTTCTGCGGGGGAACGATAGGGCTGGTGTATAGTAACAACCTAGGGCAGATTG
CACAGTCTCTTGGCAATAGCTCTGACACTTCAGCTCTAATCACTATCTATTCTGCCTTCT
CCTACTTTGGCCGCTTGCTTTCTGCCGCTCCTGATTACATGCGTGCGAAGGTCTACTTTG
CAAGAACCGGGTGGCTTAGTATAGCGCTTCTGCCAACCCCAGTTGCCTTCTTCTTGCTTG
CGGCATCAGGCAGCAGCGGCAGCATCTTGCACGCAAGCACCGCACTGGTAGGGCTAAGCT
CAGGGTTCATATTTGCCGCGGCTGTTTCAATAACATCAGAGCTGTTTGGACCCAATAGCG
TGGGAGTCAACCACAACATTCTCATCACCAACATACCAATAGGCTCCCTTGTGTATGGCA
TGCTTGCTGCAATAATCTATGATGCCAACATAGGCTCCAGCTTAAGAATGGTTACTGATA
CAGCAGTGTGTATGGGTACGAGATGTTATTTCTTGACGTTTGTCTTGTGGGGAAGCCTCT
CAGTTATAGGGCTAGTGTGCAGTGTGCTTCTATTCTTGAGAACTAGACATGCATATGATC
GGTTTGAACACAATCGGATTTCATCGCAACTGTATTAATAGCTTAATTACTAAAGAGGAA
ATGGTGATGGTTATTAATATTTCGGTTAAGATTCAATGAGTGGATTGTTGGAGGAGCAAA
TTAAGTACTTGTATAGAGATATCAATGTTTACAGGAGTGCGTTTGATATTATTTACAAGA
AACGACAAAGGCTAATAATAAACAAGCCAATTTTCT