Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0087g00170.t01
CDS Infomation

cds chromosome:12X:2:17330129:17380968:1 gene:VIT_02s0087g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCACCTTTCTGATCAGATGTCTGGTGCCGTTGCCCTTTTACCTTCTACTGCTGTAC
ATTCTAATGAATCAAAGCAAAGCTCTAAGTCCTGATGGTGAGGCGCTTTTAAGCTTTAGG
AATTCAATTGTTAGTTCAGATGGCGTCCTTCGTCAATGGAGACCAGAGGATCCTGACCCA
TGTGGTTGGAAAGGAGTGACATGTGATTTAGAAACCAAGAGAGTAATATACTTGAATCTT
CCTCATCACAAGTTGAGTGGATCAATTTCACCTGATATTGGGAAGCTAGAGCTCTTGAAG
CTTTTGGCTCTTCAAAACAACAACTTTTATGGAACGATTCCTTCAGAATTGGGAAATTGC
ACAGAGTTGCAAGCATTATATTTGCAGGGCAACTACTTAAGTGGATTAATTCCTAGTGAG
TTGGGTAGCCTTTTAGAGCTTAAAGATCTGGATATTTCAAGCAACTCTCTCAGTGGATAT
ATTCCTCCATCACTTGGGAAGTTAGACAAGCTCTCAACTTTCAATGTGTCAACCAATTTT
CTGGTTGGACCAATACCATCTGATGGTGTACTCACCAATTTTTCTGGGAACTCCTTTGTC
GGAAATCGCGGTTTGTGTGGGAAGCAGATTAATATCACCTGCAAAGACGACAGTGGAGGG
GCTGGAACAAAATCACAACCTCCCATTTTAGACCAAAACCAAGTTGGGAAGAAGAAATAC
TCTGGCCGACTACTTATAAGTGCATCAGCAACAGTGGGTGCACTGCTTTTGGTGGCACTT
ATGTGCTTTTGGGGCTGCTTTCTTTATAAAAAATGTGGTAAAAATGATGGCAGGAGTCTT
GCAATGGATGTTAGTGGAGGTGCATCAATTGTTATGTTTCATGGAGACCTGCCATACTCT
TCAAAAGATATCATCAAAAAGCTGGAGACATTGAATGAGGAACACATAATTGGTTCAGGC
GGCTTTGGAACAGTGTACAAGCTTGCCATGGATGATGGCAATGTGTTTGCTTTGAAAAGA
ATTGTAAAGATGAATGAGTGCTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGA
AGCATAAAACACAGATACCTGGTGAATTTGCGAGGATATTGCAATTCTCCCACCTCCAAA
TTGTTAATTTATGATTACTTACCTGGCGGTAGCCTGGATGAGGCTCTTCATGAGAGATCA
GAGCAACTAGACTGGGATGCACGCTTGAATATTATCATGGGAGCTGCAAAAGGACTAGCC
TACCTGCATCATGATTGTTCCCCTCGGATTATACACCGTGACATAAAGTCGAGCAACATC
TTGCTTGATGGCAATTTGGAGGCTCGAGTATCTGACTTTGGACTTGCTAAATTGTTGGAG
GATGAGGAATCTCATATTACAACCATTGTAGCAGGAACTTTTGGTTATTTGGCTCCAGAG
TATATGCAAAGCGGTAGAGCAACAGAGAAAACCGACATTTATAGTTTTGGGGTTCTGATG
CTTGAAGTATTGGCTGGGAAGCGACCCACTGATGCTTCGTTCATTGAAAAGGGCCTCAAC
ATTGTTGGCTGGTTGAATTTTCTGGTTACAGAAAATAGGCAACGGGAGATTGTTGATCCA
CAATGTGAAGGGGTCCAGTCAGAAAGTCTTGATGCCCTGCTCTCGGTTGCCATCCAGTGT
GTATCTCCAGGACCTGAGGATCGCCCAACGATGCACAGGGTGGTCCAGATACTTGAATCT
GAAGTCATGACTCCATGCCCTAGTGACTTTTATGATTCCAACTCAGACTGA

Peptide Sequence

PEP ID

VIT_02s0087g00170.t01
PEP Infomation

pep chromosome:12X:2:17330129:17380968:1 gene:VIT_02s0087g00170 transcript:VIT_02s0087g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSTFLIRCLVPLPFYLLLLYILMNQSKALSPDGEALLSFRNSIVSSDGVLRQWRPEDPDP
CGWKGVTCDLETKRVIYLNLPHHKLSGSISPDIGKLELLKLLALQNNNFYGTIPSELGNC
TELQALYLQGNYLSGLIPSELGSLLELKDLDISSNSLSGYIPPSLGKLDKLSTFNVSTNF
LVGPIPSDGVLTNFSGNSFVGNRGLCGKQINITCKDDSGGAGTKSQPPILDQNQVGKKKY
SGRLLISASATVGALLLVALMCFWGCFLYKKCGKNDGRSLAMDVSGGASIVMFHGDLPYS
SKDIIKKLETLNEEHIIGSGGFGTVYKLAMDDGNVFALKRIVKMNECFDRFFERELEILG
SIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLA
YLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPE
YMQSGRATEKTDIYSFGVLMLEVLAGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDP
QCEGVQSESLDALLSVAIQCVSPGPEDRPTMHRVVQILESEVMTPCPSDFYDSNSD

Transcript Sequence

Transcript ID

VIT_02s0087g00170.t01
Transcript Infomation

cdna chromosome:12X:2:17330129:17380968:1 gene:VIT_02s0087g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTAAAATCAAATCTAACCCAAAACCCAAATCGAAAAAATAAATAAAAATAAATAAACAA
ATTTGGGAATTTTACGACCACATCTCTCTTCCTTTTCCGTTCCATTTCTCTCCAGCTGCG
TCATAGATCCAGTCCAGTTCCAGGCAAGGAAGTTTCTTTCTTTTTTGGTTGCTGCATGAC
ATGGTCACCCATATAACATATATTCAAGGGAGCATTCTCGAATTTGGTGTATCTGATGAT
TCATAATAGTGCTATTGTGCTTGGCCTGCACCATAATGAGCACCTTTCTGATCAGATGTC
TGGTGCCGTTGCCCTTTTACCTTCTACTGCTGTACATTCTAATGAATCAAAGCAAAGCTC
TAAGTCCTGATGGTGAGGCGCTTTTAAGCTTTAGGAATTCAATTGTTAGTTCAGATGGCG
TCCTTCGTCAATGGAGACCAGAGGATCCTGACCCATGTGGTTGGAAAGGAGTGACATGTG
ATTTAGAAACCAAGAGAGTAATATACTTGAATCTTCCTCATCACAAGTTGAGTGGATCAA
TTTCACCTGATATTGGGAAGCTAGAGCTCTTGAAGCTTTTGGCTCTTCAAAACAACAACT
TTTATGGAACGATTCCTTCAGAATTGGGAAATTGCACAGAGTTGCAAGCATTATATTTGC
AGGGCAACTACTTAAGTGGATTAATTCCTAGTGAGTTGGGTAGCCTTTTAGAGCTTAAAG
ATCTGGATATTTCAAGCAACTCTCTCAGTGGATATATTCCTCCATCACTTGGGAAGTTAG
ACAAGCTCTCAACTTTCAATGTGTCAACCAATTTTCTGGTTGGACCAATACCATCTGATG
GTGTACTCACCAATTTTTCTGGGAACTCCTTTGTCGGAAATCGCGGTTTGTGTGGGAAGC
AGATTAATATCACCTGCAAAGACGACAGTGGAGGGGCTGGAACAAAATCACAACCTCCCA
TTTTAGACCAAAACCAAGTTGGGAAGAAGAAATACTCTGGCCGACTACTTATAAGTGCAT
CAGCAACAGTGGGTGCACTGCTTTTGGTGGCACTTATGTGCTTTTGGGGCTGCTTTCTTT
ATAAAAAATGTGGTAAAAATGATGGCAGGAGTCTTGCAATGGATGTTAGTGGAGGTGCAT
CAATTGTTATGTTTCATGGAGACCTGCCATACTCTTCAAAAGATATCATCAAAAAGCTGG
AGACATTGAATGAGGAACACATAATTGGTTCAGGCGGCTTTGGAACAGTGTACAAGCTTG
CCATGGATGATGGCAATGTGTTTGCTTTGAAAAGAATTGTAAAGATGAATGAGTGCTTTG
ATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGAAGCATAAAACACAGATACCTGGTGA
ATTTGCGAGGATATTGCAATTCTCCCACCTCCAAATTGTTAATTTATGATTACTTACCTG
GCGGTAGCCTGGATGAGGCTCTTCATGAGAGATCAGAGCAACTAGACTGGGATGCACGCT
TGAATATTATCATGGGAGCTGCAAAAGGACTAGCCTACCTGCATCATGATTGTTCCCCTC
GGATTATACACCGTGACATAAAGTCGAGCAACATCTTGCTTGATGGCAATTTGGAGGCTC
GAGTATCTGACTTTGGACTTGCTAAATTGTTGGAGGATGAGGAATCTCATATTACAACCA
TTGTAGCAGGAACTTTTGGTTATTTGGCTCCAGAGTATATGCAAAGCGGTAGAGCAACAG
AGAAAACCGACATTTATAGTTTTGGGGTTCTGATGCTTGAAGTATTGGCTGGGAAGCGAC
CCACTGATGCTTCGTTCATTGAAAAGGGCCTCAACATTGTTGGCTGGTTGAATTTTCTGG
TTACAGAAAATAGGCAACGGGAGATTGTTGATCCACAATGTGAAGGGGTCCAGTCAGAAA
GTCTTGATGCCCTGCTCTCGGTTGCCATCCAGTGTGTATCTCCAGGACCTGAGGATCGCC
CAACGATGCACAGGGTGGTCCAGATACTTGAATCTGAAGTCATGACTCCATGCCCTAGTG
ACTTTTATGATTCCAACTCAGACTGAGAGCCCTCTGGGAGACAAAGAAGACATGCTTTTG
TTCATATTCCATGTTATTACAGCTTCTCCCAACAAACTAGGAAGGTTATGCATGCCGTGA
GGGACTCAAAATCTGCAAGGTTTCATCCTCCACTTCATTTATTCATTTCTTTTGCAGATG
TATGACAACTAGAAGATGCCTTATTCCATCCATCCATTCATTTATATGCCTTGTTCCATC
CATCCATTCATTTATCACCAAAATCCAAGCACCTGATCAGCCACCAATGGGATTCAAGGT
AAAACGGCCTACTTTTGTTATCCTCATTTTGCATGGATTGCATGCAGACTTTCCTTTATC
AACCTGAATGAATTTTCCACTTGTGGTATGCTTTATCCGTTTCTCCTTATATTTATTTTC
CCCTCTTTGGTAATCTTCTCTAGCAATTGTTCTCTCAAATTAAATGTATAAAAACATGTA
CAAATTGAAACCTCCATTTTAGACCAATCCTTGTTTATGCCATTTTTGTAAAATATGTTT
CCTTTGCTATAGTCAATTCCTTGAATCACTCTACGAGGCTCAAAACTCCTATATGATTAT
TTGACTTGGGGTTGTAACTATTACATTTGCCTTCAATTCTGTCTAGTTTTCCACAGGGAT
TTTGCGAGATATTGTTCCATTTGATCCATCTACATCCATGTCTTTT