Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0033g01370.t01
CDS Infomation

cds chromosome:12X:2:16879691:16884324:-1 gene:VIT_02s0033g01370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTTGTCCACCGTTTGAATTCTCCAGCAAGTATTATCAAGTATCAGATGGAGGA
GGGTGTGTGAGGCAGAGCAGCTTCTTCCAAGGAAAAGCAGTGCTCAACCAAGGTGTTGGC
TACTCTGTTATTCTTGGTTTTGGTGCCTTCTTTGCTGTCTTTACCTCTTTTCTGGTATGG
CTGGAGAAGCGATACGTTGGTTCCCGACATACATCAGAATGGTTTAACACTGCAGGCAGA
AATGTAAAAACCGGACTAATCGCCAGTGTGATCGTATCCCAGTGGACTTGGGCTGCCACA
ATCTTGCAAAGCTCCAATGTAGCATGGCAGTATGGAGTTAGCGGCCCTTTCTGGTATGCC
AGTGGAGCTACCATCCAGGTACTCTTGTTTGGCATCATGGCTATAGAGATCAAAAGAAAG
GCTCCTCATGCTCATACTGTTTGTGAAATAGTTAAAGCTCGGTGGGGCACCGCTGCTCAT
ATCGTCTTCCTCACTTTCTGCTTTATGACAAACATTATTGTTACTGCTATGCTTCTTCTT
GGGGGCTCGGCAGTGGTGAATGCACTCACTGGAGTAAACATCTATGCTGCAAGCTTTCTG
ATACCGCTCGGGGTTATCGTTTATACAATAGCTGGAGGACTAAAGGCCACCTTCTTGGCG
AGCTATATTCATTCTGTGATAGTCCATGTGGTCTTAGTCATCTTCGTGTACCTAGTTTAC
ACGGCCAGCAACGAGCTTGGGAGCCCCAATGTTGTATACAAACGGTTGATGGAGGTTGCA
GGCAAGTCGAGGATGTGCCAAGAGCCATCTTCCCATGATGGGCAAGCTTGTGGCCCTGTA
AATGGGAACTACAAGGGGTCTTATCTAACGATGTTGAGCTCTGGGGGGCTTGTGTTTGGG
ATCATCAACATTGTTGGCAACTTTGGTACTGTTTTTGTTGACAATGGATACTGGGTGAGC
GCCATAGCAGCAAGGCCTTCATCTACACATAAGGGTTACCTGTTGGGTGGGCTGGTGTGG
TTCGCTGTGCCGTTCTCTTTGGCAACATCACTAGGCCTAGGAGCACTGGCGCTTGATCTA
CCAATAACTGAAAGTGAGGCAAGTCATGGACTTGTTCCCCCTGCTACAGCCATAGCTTTG
ATGGGAAAAGCCGGATCAATTCTGCTTCTCACGATGCTTTTCATGGCTGTAACTTCTGCT
GGTTCCTCTGAGCTAATAGCAGTCTCCTCACTATGCACCTATGACATCTATCGTACTTAC
ATAAACCCGAATGCAAGTGGGAAGAAAATCCTCCAAGTTTCAAGGATGGTTGTCCTGGGA
TTCGGGTGTTTCATGGGGCTTCTGGCAGTGATCCTGAACAAGGCAGGAGTTTCCCTAGGA
TGGATGTATCTGGCCATGGGAGTACTAATTGGATCAGCTGTTCTACCCATAGCTTTCATG
CTTCTCTGGAGGAAAGCAAATGCATTTGGCGCTATTCTTGGCACAGTTACAGGGTGTATT
CTAGGAGTGATCACTTGGTTATCGGTTACAAGCATCGAGTATGGGCAGGTGAACCTTGAC
ACAACTGGGAGGAATGCACCTATGCTTGCTGGAAACCTTGTTTCCATTCTAACTGGAGGA
GCTGTTCATGCTGTGTGTAGCCTTTTGTGGCCTCAGAACTATGACTGGGACACAACTAGG
CAGATAACTACGGTGGAAAAGGAGAAGAGTGAACTGCCAGCAGAAGAGTTCAGAGAGGAG
AAGCTGATCAGAGCAAAGGCATGGATCGTGAAATGGGGTGTTGGCTTTACTATCGTCATT
GTTATACTCTGGCCTCTGCTCTCCCTTCCAATAGGGAAATTCAGTAAGGGGTATTTCACA
TTCTGGGCAATCATAGCTGTAGCATGGGGTACAATAGGATCAGCTGTCATCATCGCTCTA
CCTCTAGTAGAAAGCTGGGAAACGATCCAAAATGTGTTTCTTGGGATGTTTACAAATGAC
AGGCTGATGGAGAAGATTGAGGAGATGAATATCAAGTTGCAGTCCATAATACTGTCTATT
CCTGAAGCAGAACGAACATACTTAATGGAGAAAGAGAAACTGAAGAAGAAAGAAGCATCA
GAGTACCTAGCTCATTCTACTCCAAATTTATGA

Peptide Sequence

PEP ID

VIT_02s0033g01370.t01
PEP Infomation

pep chromosome:12X:2:16879691:16884324:-1 gene:VIT_02s0033g01370 transcript:VIT_02s0033g01370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASCPPFEFSSKYYQVSDGGGCVRQSSFFQGKAVLNQGVGYSVILGFGAFFAVFTSFLVW
LEKRYVGSRHTSEWFNTAGRNVKTGLIASVIVSQWTWAATILQSSNVAWQYGVSGPFWYA
SGATIQVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTAAHIVFLTFCFMTNIIVTAMLLL
GGSAVVNALTGVNIYAASFLIPLGVIVYTIAGGLKATFLASYIHSVIVHVVLVIFVYLVY
TASNELGSPNVVYKRLMEVAGKSRMCQEPSSHDGQACGPVNGNYKGSYLTMLSSGGLVFG
IINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDL
PITESEASHGLVPPATAIALMGKAGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTY
INPNASGKKILQVSRMVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFM
LLWRKANAFGAILGTVTGCILGVITWLSVTSIEYGQVNLDTTGRNAPMLAGNLVSILTGG
AVHAVCSLLWPQNYDWDTTRQITTVEKEKSELPAEEFREEKLIRAKAWIVKWGVGFTIVI
VILWPLLSLPIGKFSKGYFTFWAIIAVAWGTIGSAVIIALPLVESWETIQNVFLGMFTND
RLMEKIEEMNIKLQSIILSIPEAERTYLMEKEKLKKKEASEYLAHSTPNL

Transcript Sequence

Transcript ID

VIT_02s0033g01370.t01
Transcript Infomation

cdna chromosome:12X:2:16879691:16884324:-1 gene:VIT_02s0033g01370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAAAAAGAGAGAGAGAGTGAGAGTGAGGTGGGTTGTGGCCCATGGCTTCTTGTCCACC
GTTTGAATTCTCCAGCAAGTATTATCAAGTATCAGATGGAGGAGGGTGTGTGAGGCAGAG
CAGCTTCTTCCAAGGAAAAGCAGTGCTCAACCAAGGTGTTGGCTACTCTGTTATTCTTGG
TTTTGGTGCCTTCTTTGCTGTCTTTACCTCTTTTCTGGTATGGCTGGAGAAGCGATACGT
TGGTTCCCGACATACATCAGAATGGTTTAACACTGCAGGCAGAAATGTAAAAACCGGACT
AATCGCCAGTGTGATCGTATCCCAGTGGACTTGGGCTGCCACAATCTTGCAAAGCTCCAA
TGTAGCATGGCAGTATGGAGTTAGCGGCCCTTTCTGGTATGCCAGTGGAGCTACCATCCA
GGTACTCTTGTTTGGCATCATGGCTATAGAGATCAAAAGAAAGGCTCCTCATGCTCATAC
TGTTTGTGAAATAGTTAAAGCTCGGTGGGGCACCGCTGCTCATATCGTCTTCCTCACTTT
CTGCTTTATGACAAACATTATTGTTACTGCTATGCTTCTTCTTGGGGGCTCGGCAGTGGT
GAATGCACTCACTGGAGTAAACATCTATGCTGCAAGCTTTCTGATACCGCTCGGGGTTAT
CGTTTATACAATAGCTGGAGGACTAAAGGCCACCTTCTTGGCGAGCTATATTCATTCTGT
GATAGTCCATGTGGTCTTAGTCATCTTCGTGTACCTAGTTTACACGGCCAGCAACGAGCT
TGGGAGCCCCAATGTTGTATACAAACGGTTGATGGAGGTTGCAGGCAAGTCGAGGATGTG
CCAAGAGCCATCTTCCCATGATGGGCAAGCTTGTGGCCCTGTAAATGGGAACTACAAGGG
GTCTTATCTAACGATGTTGAGCTCTGGGGGGCTTGTGTTTGGGATCATCAACATTGTTGG
CAACTTTGGTACTGTTTTTGTTGACAATGGATACTGGGTGAGCGCCATAGCAGCAAGGCC
TTCATCTACACATAAGGGTTACCTGTTGGGTGGGCTGGTGTGGTTCGCTGTGCCGTTCTC
TTTGGCAACATCACTAGGCCTAGGAGCACTGGCGCTTGATCTACCAATAACTGAAAGTGA
GGCAAGTCATGGACTTGTTCCCCCTGCTACAGCCATAGCTTTGATGGGAAAAGCCGGATC
AATTCTGCTTCTCACGATGCTTTTCATGGCTGTAACTTCTGCTGGTTCCTCTGAGCTAAT
AGCAGTCTCCTCACTATGCACCTATGACATCTATCGTACTTACATAAACCCGAATGCAAG
TGGGAAGAAAATCCTCCAAGTTTCAAGGATGGTTGTCCTGGGATTCGGGTGTTTCATGGG
GCTTCTGGCAGTGATCCTGAACAAGGCAGGAGTTTCCCTAGGATGGATGTATCTGGCCAT
GGGAGTACTAATTGGATCAGCTGTTCTACCCATAGCTTTCATGCTTCTCTGGAGGAAAGC
AAATGCATTTGGCGCTATTCTTGGCACAGTTACAGGGTGTATTCTAGGAGTGATCACTTG
GTTATCGGTTACAAGCATCGAGTATGGGCAGGTGAACCTTGACACAACTGGGAGGAATGC
ACCTATGCTTGCTGGAAACCTTGTTTCCATTCTAACTGGAGGAGCTGTTCATGCTGTGTG
TAGCCTTTTGTGGCCTCAGAACTATGACTGGGACACAACTAGGCAGATAACTACGGTGGA
AAAGGAGAAGAGTGAACTGCCAGCAGAAGAGTTCAGAGAGGAGAAGCTGATCAGAGCAAA
GGCATGGATCGTGAAATGGGGTGTTGGCTTTACTATCGTCATTGTTATACTCTGGCCTCT
GCTCTCCCTTCCAATAGGGAAATTCAGTAAGGGGTATTTCACATTCTGGGCAATCATAGC
TGTAGCATGGGGTACAATAGGATCAGCTGTCATCATCGCTCTACCTCTAGTAGAAAGCTG
GGAAACGATCCAAAATGTGTTTCTTGGGATGTTTACAAATGACAGGCTGATGGAGAAGAT
TGAGGAGATGAATATCAAGTTGCAGTCCATAATACTGTCTATTCCTGAAGCAGAACGAAC
ATACTTAATGGAGAAAGAGAAACTGAAGAAGAAAGAAGCATCAGAGTACCTAGCTCATTC
TACTCCAAATTTATGAACTCAAGAAATGAGGAATGTTTTCTAGCTTTTACAGTGTATATT
TACATATTTATGTAAAGGAAACTATGAGGAATTGTATAATGGAATTGATGTTCTACAAA