Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_02s0033g01170.t01
CDS Infomation	cds chromosome:12X:2:16545560:16552676:-1 gene:VIT_02s0033g01170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:F6I092]
Sequence	ATGGGCGTTAATCTGACCGAAGGCGCCATCTCGATGCTTTGCAGCGGCGACGCGCAAGGG TCCGATGTGAAGCCGGTGCTGCAAGTGGCGGACATCAGATTGGTGAATACTCAGCAGCAG AGCAACAGCAACGAAAGGTTTCGGATACTGCTGTCGGATGGGTGCCATCTGCAGCAGGGG ATGCTGGCGACGCAGAGGAACGAGTTGGTGAAATCCGGGAGGTTGCAGAAGGGGTCGGTT GTTCAGTTGACTCAGTTTGTCTGCAACGTCATCAAGGATCGCATGATTATTATTATCATT GATTTGGATGTGATACTTGAAAAGTGTGATCCTATTGGGGAACCAAAACAATATGTGCAA GGTGGAACTGCTGGTGGTGTTGCTCCTATTGCAAGAACTTCAGCGCCCATGCCATCCTCA GTGGACCATCCAGGGACAGTGCTGGGAAATCCTCAATCTTTTGGCAATAGTTCACTCACT GGTGGCTCTGCTGCTAAACCAAATATGGCTGGGGTAGCTTCTCCATACCATGCTAATTCT TTTTCCAGCAATCCTGACTCAGGACGATTTGCTGGAACAAATGCACCTCCGATGTACAGC AAAATGCAACCTGACGCTGGAATTCCTGCATCAGCAGCTTCAACTGGATCATATGGTGAC CAGAGTACAGGTTTTCGGAACAATAAAGTAGAAGTTTCACGGGCTCCTTATAATGCTCCT GCACGCCAGCCTCAGTCTGCATATCAGCAGCCACCTCCAATGTACACAAATAGAGGACCT GTGGCTAGGAATGAAGCTGCTGCCAGAATAATTCCAATTGCTGCTCTTAATCCTTATCAG GGAAGGTGGACAATTAAGGCCAGAGTTACTGCAAAGGGAGAACTTCGGCACTATAATAAT CCTCGGGGTGATGGCAAAGTATTCTCTTTTGATCTTCTGGACTCGGATGGTGGAGAAATT AGGGTAACATGTTTCAATGCTGTGGCTGATCAATTCTACAATCAGATTGAAACTGGTAAA GTGTATTTAATTTCCAAGGGGAGCCTGAAACCTGCTCAAAAAACTTTCAATCACCTTCGC AATGATCATGAGATATTCTTAGAGAGTACATCAACAATCCAGCCTTGCTTTGATGATGAC AACTCAATCCCGAGGCAACAATTTCACTTCCGGTCCATCAGTGATGTTGAAAGCATGGAG AACAACAGTGTTGTGGATGTAATTGGTGTGGTCTCTTTTATCAGTCCCTCTGCTTCCATA ATGAGGAAAAATGGTACTGAAACTCAGAAGAGAGCCCTCCATTTGAAGGACATGTCTGGC CGAAGTGTTGAATTAACTCTATGGGGAAATTTCTGCAATGCGGAAGGACAAAGGCTGCAA AATATGTGTGATTCTGGGGTATTTCCTGTTCTGGCTGTGAAATCTGCCAGGGTTAATGAT TTCAATGGGAAAGCAGTGGGGACTATTTCTACCAGCCAACTGTTCATAGAGCCAGATTTT CCAGAGGCTCGCAAGCTTAAAGAATGGTTTGACAAGGAAGGGAGGAACACCCCTTCTGTC TCTATTTCCAGAGAAGTAACAAGTATGGGCAGAACAGATGTTCGAAAGACTATTTCTCAA ATCAAAGATGAGAGGCTAGGGACTTCAGAAAAGCCAGATTGGATTACTGTCTGTGCAACT GTTTCTTTCATAAAAGTTGATAATTTTTGCTATACAGCATGCCCCATTATGATTGGTGAT CGTCAATGCAACAAGAAGGTTACGAACAATGGAGATGGGAAATGGCGATGTGAGAGGTGT GATCAGTCTGTTGATGATTGTGACTACAGGTATATTCTTCAGTTCCAGATACAGGACCAT ACTGGCTTGACATGGGTAACTGCATTCCAGGAATGCGGTGAGGAGATCATGGGCATATCT GCGAAAAATCTGTATTATTTGAAATATGAAGAACAAGATGATGAAAAATTTGGAGAAATC CTACGCGGGGTTCTTTTTACTAAATATTCATTCAAATTGAAAGTGAAGGAGGAGATATTC AGTGATGAACAACGTGTGAAGTCTACTGTTGTCAAAGCAGAGAAGGTAAATTTCTCTTCT GAGTCCCGGTTTCTTTTGGATATGGTGGAGAAGCATAAAGTAGAAGACTCCACTTTTCCC CTCAAATCAGAAAATGTTATTTCCAATGGGGGAATGACTAATCCTGGACTTGGGAATGTT GGAATTAGACAGTCCACACCATCTGTTAACTATTCTGGAAATGCTAGCAATGCTGGTAGA GATTTTGGGTTCCCGGCAAACCAAGGGGTTCAGCATGGGAACCAATATGGTAGCTCTGGT CTTTCTGCAACTGGTTCAACTGGTATGTATCAGAGTTGCAACAGCTGTGGTGGTACTGGC CATAGCTCTTCAAACTGCCCTAGTGTCATGCACTCCCCGAGACAGTCATCAGGAGGGGGC TATGTCAGCAGGGCATCCACTGGCCCAAGTGCTGGAGGCACGACTGGTGAGTGCTATAAA TGCCATCAATTCGGACACTGGGCAAGGGACTGTCCTGGTTTGAACACTGGTCCTCCAGCT TATGGAAGCAGTGGTGTCAACTCAGGGAGTTACAGCAGCTTTGCAAAGCAACGGGTTGGC GGCTTTTAA

Peptide Sequence

PEP ID	VIT_02s0033g01170.t01
PEP Infomation	pep chromosome:12X:2:16545560:16552676:-1 gene:VIT_02s0033g01170 transcript:VIT_02s0033g01170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:F6I092]
Sequence	MGVNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQG MLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQ GGTAGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYHANS FSSNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAP ARQPQSAYQQPPPMYTNRGPVARNEAAARIIPIAALNPYQGRWTIKARVTAKGELRHYNN PRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLR NDHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASI MRKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVND FNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTISQ IKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERC DQSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEI LRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFP LKSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFPANQGVQHGNQYGSSG LSATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYK CHQFGHWARDCPGLNTGPPAYGSSGVNSGSYSSFAKQRVGGF

Transcript Sequence

Transcript ID	VIT_02s0033g01170.t01
Transcript Infomation	cdna chromosome:12X:2:16545560:16552676:-1 gene:VIT_02s0033g01170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:F6I092]
Sequence	ATGGGCGTTAATCTGACCGAAGGCGCCATCTCGATGCTTTGCAGCGGCGACGCGCAAGGG TCCGATGTGAAGCCGGTGCTGCAAGTGGCGGACATCAGATTGGTGAATACTCAGCAGCAG AGCAACAGCAACGAAAGGTTTCGGATACTGCTGTCGGATGGGTGCCATCTGCAGCAGGGG ATGCTGGCGACGCAGAGGAACGAGTTGGTGAAATCCGGGAGGTTGCAGAAGGGGTCGGTT GTTCAGTTGACTCAGTTTGTCTGCAACGTCATCAAGGATCGCATGATTATTATTATCATT GATTTGGATGTGATACTTGAAAAGTGTGATCCTATTGGGGAACCAAAACAATATGTGCAA GGTGGAACTGCTGGTGGTGTTGCTCCTATTGCAAGAACTTCAGCGCCCATGCCATCCTCA GTGGACCATCCAGGGACAGTGCTGGGAAATCCTCAATCTTTTGGCAATAGTTCACTCACT GGTGGCTCTGCTGCTAAACCAAATATGGCTGGGGTAGCTTCTCCATACCATGCTAATTCT TTTTCCAGCAATCCTGACTCAGGACGATTTGCTGGAACAAATGCACCTCCGATGTACAGC AAAATGCAACCTGACGCTGGAATTCCTGCATCAGCAGCTTCAACTGGATCATATGGTGAC CAGAGTACAGGTTTTCGGAACAATAAAGTAGAAGTTTCACGGGCTCCTTATAATGCTCCT GCACGCCAGCCTCAGTCTGCATATCAGCAGCCACCTCCAATGTACACAAATAGAGGACCT GTGGCTAGGAATGAAGCTGCTGCCAGAATAATTCCAATTGCTGCTCTTAATCCTTATCAG GGAAGGTGGACAATTAAGGCCAGAGTTACTGCAAAGGGAGAACTTCGGCACTATAATAAT CCTCGGGGTGATGGCAAAGTATTCTCTTTTGATCTTCTGGACTCGGATGGTGGAGAAATT AGGGTAACATGTTTCAATGCTGTGGCTGATCAATTCTACAATCAGATTGAAACTGGTAAA GTGTATTTAATTTCCAAGGGGAGCCTGAAACCTGCTCAAAAAACTTTCAATCACCTTCGC AATGATCATGAGATATTCTTAGAGAGTACATCAACAATCCAGCCTTGCTTTGATGATGAC AACTCAATCCCGAGGCAACAATTTCACTTCCGGTCCATCAGTGATGTTGAAAGCATGGAG AACAACAGTGTTGTGGATGTAATTGGTGTGGTCTCTTTTATCAGTCCCTCTGCTTCCATA ATGAGGAAAAATGGTACTGAAACTCAGAAGAGAGCCCTCCATTTGAAGGACATGTCTGGC CGAAGTGTTGAATTAACTCTATGGGGAAATTTCTGCAATGCGGAAGGACAAAGGCTGCAA AATATGTGTGATTCTGGGGTATTTCCTGTTCTGGCTGTGAAATCTGCCAGGGTTAATGAT TTCAATGGGAAAGCAGTGGGGACTATTTCTACCAGCCAACTGTTCATAGAGCCAGATTTT CCAGAGGCTCGCAAGCTTAAAGAATGGTTTGACAAGGAAGGGAGGAACACCCCTTCTGTC TCTATTTCCAGAGAAGTAACAAGTATGGGCAGAACAGATGTTCGAAAGACTATTTCTCAA ATCAAAGATGAGAGGCTAGGGACTTCAGAAAAGCCAGATTGGATTACTGTCTGTGCAACT GTTTCTTTCATAAAAGTTGATAATTTTTGCTATACAGCATGCCCCATTATGATTGGTGAT CGTCAATGCAACAAGAAGGTTACGAACAATGGAGATGGGAAATGGCGATGTGAGAGGTGT GATCAGTCTGTTGATGATTGTGACTACAGGTATATTCTTCAGTTCCAGATACAGGACCAT ACTGGCTTGACATGGGTAACTGCATTCCAGGAATGCGGTGAGGAGATCATGGGCATATCT GCGAAAAATCTGTATTATTTGAAATATGAAGAACAAGATGATGAAAAATTTGGAGAAATC CTACGCGGGGTTCTTTTTACTAAATATTCATTCAAATTGAAAGTGAAGGAGGAGATATTC AGTGATGAACAACGTGTGAAGTCTACTGTTGTCAAAGCAGAGAAGGTAAATTTCTCTTCT GAGTCCCGGTTTCTTTTGGATATGGTGGAGAAGCATAAAGTAGAAGACTCCACTTTTCCC CTCAAATCAGAAAATGTTATTTCCAATGGGGGAATGACTAATCCTGGACTTGGGAATGTT GGAATTAGACAGTCCACACCATCTGTTAACTATTCTGGAAATGCTAGCAATGCTGGTAGA GATTTTGGGTTCCCGGCAAACCAAGGGGTTCAGCATGGGAACCAATATGGTAGCTCTGGT CTTTCTGCAACTGGTTCAACTGGTATGTATCAGAGTTGCAACAGCTGTGGTGGTACTGGC CATAGCTCTTCAAACTGCCCTAGTGTCATGCACTCCCCGAGACAGTCATCAGGAGGGGGC TATGTCAGCAGGGCATCCACTGGCCCAAGTGCTGGAGGCACGACTGGTGAGTGCTATAAA TGCCATCAATTCGGACACTGGGCAAGGGACTGTCCTGGTTTGAACACTGGTCCTCCAGCT TATGGAAGCAGTGGTGTCAACTCAGGGAGTTACAGCAGCTTTGCAAAGCAACGGGTTGGC GGCTTTTAAACTCAGGGAATTAAAGTCCACAAATTTGTATAAGCTGGGTTTTGCTGAATC AAAGGTTGGTGGCTTTTAAACTTGGGGGAGAATGACAGTACACAAATTTGTATGGTTTTG TCAATATCATGTTCCAATAGGATTTTGGGTTGCTGAGTTCCTTCTGTACAGCAGATGATT GCAATCCATAACTTGTGTCTAACACAAGGATCAGAGCAGTCAAATCCTAGCTTTAGAGCT GTGTCATGGAATCCTGTTGCGAGGTCTTCTACTTTAATGTCAACGCATTCCTGTAATATA TTTTCTGATGTGGGCTTTTCAGGTACTTGACTATCATTTTGGAACTGGTTCTGCTTTCTT TCAGTTTTCTATTTATTTTTACTTATCTTTTGTTTTTTTCATTTCTCTCCATCGTTTCTT TAGCTTGAACATATGATTAGTATGATTAGGGTTCAAAGATGTTTGAAAAGCTTGACGAAA CCTTATGGCTGCAATAGGGCTTTGGTTGTGTTTATATTTGCCGTCTGCAGAGACAATGCT GAGCATCTTATCTAGGTTTCTAACCTGGATGAATGATTATGAATTGAGCTTTGGCAG