Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0033g00120.t01
CDS Infomation

cds chromosome:12X:2:13593068:13673561:1 gene:VIT_02s0033g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGCGTCGAATGTGGTGCACGAGGGATGGATGGTGCGGTACGGACTGAGGAAGATC
GGCACATCCTACATCCATATGCGGTATTTCGTGTTGGAGTCGCGTCTGCTTGCTTACTAC
AAGAGAAAGCCTGTGCAAGATGCGGTTCCGATCAAGACGCTTCTAATTGGTGGGAACTGT
AGGGTGGAAGACAGAGGGTTGAAGACTCACCGTGGACATATGGTTTATGTTTTGTCTATT
TACAACAAGAAAGAGAAGAACCATCAAATCATGATGGCAGCATTCAATATCCAGGAGGCA
TTAATCTGGAAAGAAAAAATTGAGGCTGTAATTGATCAGCATCAGGACTCACAAGTTGCA
AATGGAAATAAATATATTTCATTTGAATATAAATCTGGGATGGATAATGGAAGGGCTGCT
TCCTCATCTGACCATGAAAGTCAGTTTAGTGCAGAGGATGATGAAGAAGATACTCATCGT
GCTTTGGTTCGGAGAAAAACAATTGGAAATGATTTTCCTGACTCAGTGTTTGACTGGACT
CGAGAAATGGATTCAGAATTGTTAAACCAGGATATCAACAATCAAGCCTTTTCCTCTGAT
CAAAAAAAAGAAAAAAACAATCAAGCCTTCCCCAAAAAGCATTGGCGTCTTCTCCAATGC
CAAAATGGACTTCGAATTTTTGAAGAGCTTCTTGAAGTTGATTACCTTCCAAGGAGCTGT
AGTAGAGCAATGAAAGCTGTAGGGGTTGTGAAGGCAACCTGTGAAGAAATATTTGAGCTT
GTAATGAGCATGGATGGAACACGGTTTGAGTGGGATTGCAGTTTCCAATATGGCAGCTTA
GTGGAGGAGGTAGATGGACATACAGCTATTCTCTATCATAGGCTTCAGCTGGGCTGGTTC
CCTATGTTTGTGTGGCCTCGTGACCTTTGCTATGTGCGTTATTGGTGTCGAAATGATGAT
GGAAGTTATGTTGTGTTATTTCGTTCTAGGGAGCACGAGAACTGTGGTCCGCAACCAGGA
TGTGTGCGTGCCCATCTTGAAAGTGGGGGATTCATCATTTCCCCTCTAAAACCTCGAAAT
GGGAGGCCCAGAACACAGGTTCAGCATCTTATGCAAATTGATCTGAAAGGATGGGGCACT
GGTTATATTTCATCATTTCAGCAACATTGTGTCCTTCAGATGTTAAATAGTGTTGCTGGA
CTGCGTGAGTGGTTTTCTCAGACGGATAAAAGGAATGCTCTGCCAAGAATTCCTGTTATG
GTCAATATGGCCTCAACTTCTTTTACTTCAGAGAAGAATCAGAAGCCACAGGAGTCTTCT
GATCAATTGAATGCTACAAGTAGGAACTCAATGATGATGGATGAATACTCTGATGAAGAT
GAAGAATTTCAAGCACCCGAGACAGAACAAGAGGCATACTCAATGAGTCTTCCGAATGAA
GTCAAAGGAACAGCCATGGAAGAAGAACCCCAAGATAAAATTGATGTCTCATGTTTTTCG
GGCAATCTACGACGTGATGACCGTGATAAGGGTCGTGACTGCTGGACGATATCTGATGGG
AACAACTTCAGAGTTCGTAGCAAGCATTTTTGTTATGACAAAACGAAGATTCCTGCAGGG
AAACATCTTATGGATCTTGTTGCTGTTGATTGGTTCAAAGACTCAAAACGGATCGACCAT
GTTGCTAGGCGACAAGGCTGTGCAGCACAAGTTGCATCAGAGAAAGGACTTTTCTCTATT
GTCATAAACCTGCAAGTACCCGGTTCAACACACTACAGTATGATATTTTATTTTGTAACT
AAGGAATTGCTAACTGGATCCCTGTTGCAACGATTTGTTGATGGTTATGATGAGTTCCGA
AATAGCAGGCTGAAGCTCATCCCATCAGTTCCCAAGGCTCCATGGATGGTGCGCCGGATT
GTTGGAAGCACCCCTCATTTCCTAGGAAAAGTAGTTGATTGCAATTATATCCGTGGTCCA
AAGTACTTGGAGATTGATGTTGATTTTGGTTCTTCAACTGTTGTTGATGGAGCTTTGGCC
TTTGTAAATGGTGCAATTCCTAACTTGGTTGTTGACATGGCTTTCCTTGTACAGGGAAAC
ACTGAGGATGAGTTGCCGGAGAGGTTGATCGGCGCAGTCCGGGTTTCCCGTGTAGATTTT
TCATCAGCTATAGTCCCAAAATTGGACCCATATACATATGCTTGA

Peptide Sequence

PEP ID

VIT_02s0033g00120.t01
PEP Infomation

pep chromosome:12X:2:13593068:13673561:1 gene:VIT_02s0033g00120 transcript:VIT_02s0033g00120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVASNVVHEGWMVRYGLRKIGTSYIHMRYFVLESRLLAYYKRKPVQDAVPIKTLLIGGNC
RVEDRGLKTHRGHMVYVLSIYNKKEKNHQIMMAAFNIQEALIWKEKIEAVIDQHQDSQVA
NGNKYISFEYKSGMDNGRAASSSDHESQFSAEDDEEDTHRALVRRKTIGNDFPDSVFDWT
REMDSELLNQDINNQAFSSDQKKEKNNQAFPKKHWRLLQCQNGLRIFEELLEVDYLPRSC
SRAMKAVGVVKATCEEIFELVMSMDGTRFEWDCSFQYGSLVEEVDGHTAILYHRLQLGWF
PMFVWPRDLCYVRYWCRNDDGSYVVLFRSREHENCGPQPGCVRAHLESGGFIISPLKPRN
GRPRTQVQHLMQIDLKGWGTGYISSFQQHCVLQMLNSVAGLREWFSQTDKRNALPRIPVM
VNMASTSFTSEKNQKPQESSDQLNATSRNSMMMDEYSDEDEEFQAPETEQEAYSMSLPNE
VKGTAMEEEPQDKIDVSCFSGNLRRDDRDKGRDCWTISDGNNFRVRSKHFCYDKTKIPAG
KHLMDLVAVDWFKDSKRIDHVARRQGCAAQVASEKGLFSIVINLQVPGSTHYSMIFYFVT
KELLTGSLLQRFVDGYDEFRNSRLKLIPSVPKAPWMVRRIVGSTPHFLGKVVDCNYIRGP
KYLEIDVDFGSSTVVDGALAFVNGAIPNLVVDMAFLVQGNTEDELPERLIGAVRVSRVDF
SSAIVPKLDPYTYA

Transcript Sequence

Transcript ID

VIT_02s0033g00120.t01
Transcript Infomation

cdna chromosome:12X:2:13593068:13673561:1 gene:VIT_02s0033g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGAGTAGGAGAAAGTGAGTGATTGTTGAATTTGTGGAGATCACGAGATGTGGGTAGTAG
GAGAAAGTGAGAGAGTGATTGTTGAATTTGTGGAGATCACGAGATGGTGGCGTCGAATGT
GGTGCACGAGGGATGGATGGTGCGGTACGGACTGAGGAAGATCGGCACATCCTACATCCA
TATGCGGTATTTCGTGTTGGAGTCGCGTCTGCTTGCTTACTACAAGAGAAAGCCTGTGCA
AGATGCGGTTCCGATCAAGACGCTTCTAATTGGTGGGAACTGTAGGGTGGAAGACAGAGG
GTTGAAGACTCACCGTGGACATATGGTTTATGTTTTGTCTATTTACAACAAGAAAGAGAA
GAACCATCAAATCATGATGGCAGCATTCAATATCCAGGAGGCATTAATCTGGAAAGAAAA
AATTGAGGCTGTAATTGATCAGCATCAGGACTCACAAGTTGCAAATGGAAATAAATATAT
TTCATTTGAATATAAATCTGGGATGGATAATGGAAGGGCTGCTTCCTCATCTGACCATGA
AAGTCAGTTTAGTGCAGAGGATGATGAAGAAGATACTCATCGTGCTTTGGTTCGGAGAAA
AACAATTGGAAATGATTTTCCTGACTCAGTGTTTGACTGGACTCGAGAAATGGATTCAGA
ATTGTTAAACCAGGATATCAACAATCAAGCCTTTTCCTCTGATCAAAAAAAAGAAAAAAA
CAATCAAGCCTTCCCCAAAAAGCATTGGCGTCTTCTCCAATGCCAAAATGGACTTCGAAT
TTTTGAAGAGCTTCTTGAAGTTGATTACCTTCCAAGGAGCTGTAGTAGAGCAATGAAAGC
TGTAGGGGTTGTGAAGGCAACCTGTGAAGAAATATTTGAGCTTGTAATGAGCATGGATGG
AACACGGTTTGAGTGGGATTGCAGTTTCCAATATGGCAGCTTAGTGGAGGAGGTAGATGG
ACATACAGCTATTCTCTATCATAGGCTTCAGCTGGGCTGGTTCCCTATGTTTGTGTGGCC
TCGTGACCTTTGCTATGTGCGTTATTGGTGTCGAAATGATGATGGAAGTTATGTTGTGTT
ATTTCGTTCTAGGGAGCACGAGAACTGTGGTCCGCAACCAGGATGTGTGCGTGCCCATCT
TGAAAGTGGGGGATTCATCATTTCCCCTCTAAAACCTCGAAATGGGAGGCCCAGAACACA
GGTTCAGCATCTTATGCAAATTGATCTGAAAGGATGGGGCACTGGTTATATTTCATCATT
TCAGCAACATTGTGTCCTTCAGATGTTAAATAGTGTTGCTGGACTGCGTGAGTGGTTTTC
TCAGACGGATAAAAGGAATGCTCTGCCAAGAATTCCTGTTATGGTCAATATGGCCTCAAC
TTCTTTTACTTCAGAGAAGAATCAGAAGCCACAGGAGTCTTCTGATCAATTGAATGCTAC
AAGTAGGAACTCAATGATGATGGATGAATACTCTGATGAAGATGAAGAATTTCAAGCACC
CGAGACAGAACAAGAGGCATACTCAATGAGTCTTCCGAATGAAGTCAAAGGAACAGCCAT
GGAAGAAGAACCCCAAGATAAAATTGATGTCTCATGTTTTTCGGGCAATCTACGACGTGA
TGACCGTGATAAGGGTCGTGACTGCTGGACGATATCTGATGGGAACAACTTCAGAGTTCG
TAGCAAGCATTTTTGTTATGACAAAACGAAGATTCCTGCAGGGAAACATCTTATGGATCT
TGTTGCTGTTGATTGGTTCAAAGACTCAAAACGGATCGACCATGTTGCTAGGCGACAAGG
CTGTGCAGCACAAGTTGCATCAGAGAAAGGACTTTTCTCTATTGTCATAAACCTGCAAGT
ACCCGGTTCAACACACTACAGTATGATATTTTATTTTGTAACTAAGGAATTGCTAACTGG
ATCCCTGTTGCAACGATTTGTTGATGGTTATGATGAGTTCCGAAATAGCAGGCTGAAGCT
CATCCCATCAGTTCCCAAGGCTCCATGGATGGTGCGCCGGATTGTTGGAAGCACCCCTCA
TTTCCTAGGAAAAGTAGTTGATTGCAATTATATCCGTGGTCCAAAGTACTTGGAGATTGA
TGTTGATTTTGGTTCTTCAACTGTTGTTGATGGAGCTTTGGCCTTTGTAAATGGTGCAAT
TCCTAACTTGGTTGTTGACATGGCTTTCCTTGTACAGGGAAACACTGAGGATGAGTTGCC
GGAGAGGTTGATCGGCGCAGTCCGGGTTTCCCGTGTAGATTTTTCATCAGCTATAGTCCC
AAAATTGGACCCATATACATATGCTTGAGTTGAAACATTGAATTTTATACAAAATCTTTT
GTTTGTTTCAGGTATGCAGACATATATGTATATTAATATTGCTAGTTCGACTTTATCAAA
AGATTTGTTAGAAATAAACAATGTTTTTAGAATGGGATTGAATATTGAATTAGAAAAATT
ACGTATCTTAGTAGCGGACAAATGAGCATGGGAGGCAGGAACAGGCAAATGAGTTTAGAA
AGAAGGAACTTGGACCAGATGAATGGGGAGCAACAAGTTTTTGGTCAACTGATGGTTGAC
CAATTTGTG