Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g05140.t01
CDS Infomation

cds chromosome:12X:2:4625091:4628481:-1 gene:VIT_02s0025g05140 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A5ADV7]
Sequence

ATGGCAGTGCATCTTCACTCCACGCCCTCTTCTTCTTCATCTCTACACTCCCGAACCAGA
GTCTCTCAGCCGCCTCTTAGTTGCGCGACCAAGCTCTTTTCAGGATTGAAGCTTCAATCT
GCAAGTACGTTTGGTACTGGAAAGCCGAACTTGACAGTTGAATTCTTCAACAAAGTTCAT
AAGAGCGTCCAATCCAGGACTAGTGACAGTAAATCGACACGAGCACGTGTTCGAATGATG
CCTATAGGGACCCCAAGAGTGCCCTATAGAACTCCTGGTGAGGGAACTTGGCAATGGGTT
GATTTGTGGAATGCCCTGTACCGGGAACGAGTTATCTACATTGGACAACATATAGATGAA
GAATTTAGCAACCAACTATTAGCCACGATGTTGTACCTTGACAGCATTGAATCTTCCAAA
AGGATGTTTTTTTATATTAACAGTCCTGGTGGAGATCTTACTCCAAGCTTGGCTATATAT
GATACCATGCAAAGCTTGAAAAGTCCTGTTGGCACCAATTGTTTGGGTTTTGCATATAAC
CTAGCTACCTTTCTTCTAGCAGCTGGAGAAAAGGGTAATCGCTTGGCAATGCCTCTTTCA
AGGATTGCACTACAATCACCAGCTGGAGCTGCTCGTGGTCAGGCTGATGACATTCGTAAT
GAAGCAAATGAGCTTCTTAGAATCAGAGATTACCTTTTTTCAGAGTTGGCCAATAAGACG
GGCCAGCCCATCGATAAGATTAACAAGGATTTAAGGCGGATGAAACGCTTCAATGCCCAG
GAGGCTCTTGAATATGGGCTCATTGATCGTATATTAAGGCCACCCCGAGTTAAAGCTGAT
GCACCACGCAAAGATGCTGGAACTGGTCTCGGTTAG

Peptide Sequence

PEP ID

VIT_02s0025g05140.t01
PEP Infomation

pep chromosome:12X:2:4625091:4628481:-1 gene:VIT_02s0025g05140 transcript:VIT_02s0025g05140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A5ADV7]
Sequence

MAVHLHSTPSSSSSLHSRTRVSQPPLSCATKLFSGLKLQSASTFGTGKPNLTVEFFNKVH
KSVQSRTSDSKSTRARVRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIYIGQHIDE
EFSNQLLATMLYLDSIESSKRMFFYINSPGGDLTPSLAIYDTMQSLKSPVGTNCLGFAYN
LATFLLAAGEKGNRLAMPLSRIALQSPAGAARGQADDIRNEANELLRIRDYLFSELANKT
GQPIDKINKDLRRMKRFNAQEALEYGLIDRILRPPRVKADAPRKDAGTGLG

Transcript Sequence

Transcript ID

VIT_02s0025g05140.t01
Transcript Infomation

cdna chromosome:12X:2:4625091:4628481:-1 gene:VIT_02s0025g05140 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A5ADV7]
Sequence

TTCGCTTTGGGTTCCTTCTCTCTCGCCAAAATGGCAGTGCATCTTCACTCCACGCCCTCT
TCTTCTTCATCTCTACACTCCCGAACCAGAGTCTCTCAGCCGCCTCTTAGTTGCGCGACC
AAGCTCTTTTCAGGATTGAAGCTTCAATCTGCAAGTACGTTTGGTACTGGAAAGCCGAAC
TTGACAGTTGAATTCTTCAACAAAGTTCATAAGAGCGTCCAATCCAGGACTAGTGACAGT
AAATCGACACGAGCACGTGTTCGAATGATGCCTATAGGGACCCCAAGAGTGCCCTATAGA
ACTCCTGGTGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTGTACCGGGAACGA
GTTATCTACATTGGACAACATATAGATGAAGAATTTAGCAACCAACTATTAGCCACGATG
TTGTACCTTGACAGCATTGAATCTTCCAAAAGGATGTTTTTTTATATTAACAGTCCTGGT
GGAGATCTTACTCCAAGCTTGGCTATATATGATACCATGCAAAGCTTGAAAAGTCCTGTT
GGCACCAATTGTTTGGGTTTTGCATATAACCTAGCTACCTTTCTTCTAGCAGCTGGAGAA
AAGGGTAATCGCTTGGCAATGCCTCTTTCAAGGATTGCACTACAATCACCAGCTGGAGCT
GCTCGTGGTCAGGCTGATGACATTCGTAATGAAGCAAATGAGCTTCTTAGAATCAGAGAT
TACCTTTTTTCAGAGTTGGCCAATAAGACGGGCCAGCCCATCGATAAGATTAACAAGGAT
TTAAGGCGGATGAAACGCTTCAATGCCCAGGAGGCTCTTGAATATGGGCTCATTGATCGT
ATATTAAGGCCACCCCGAGTTAAAGCTGATGCACCACGCAAAGATGCTGGAACTGGTCTC
GGTTAGTGTTTTTGTTTTATTGCCAACAAATTGGCTGATAACTATTGAGCAACCCAGAAA
GTCTCCGAAGTTCATTTATGTCCTTGTATAATAAGTTGTTTAGTGAGGAATTGATGCATG
AGTTTATTATTGTGATTGCTAGGAATTTTATCGGCCATTGAAGACTTATAGAATTTTTTT
TTTTCTCAAAGCAAGGTTTTACATGAATTTTCCATTGCCAGGCCACTTTCACCATTATTA
TACTGGGATCTTGTATTCTAATTTATTGGGTCTGATCAAATAAATTTTCAGGTACAATGC
CCC