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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g04700.t01
CDS Infomation

cds chromosome:12X:2:4249303:4250807:-1 gene:VIT_02s0025g04700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:D7TWA0]
Sequence

ATGGCTTCTTCCCTTCACTCATGGGGCTGCAGGTTCCTCTTCATGGGATTGGTATTCACA
ATCATTGCCAAATCAACCCTCGCTGTTGCACCTGTCTTCAGGCCAAGCCGATGGGCACTT
GCGCATGCCACCTTTTATGGCGACGACACCGCCTCCGAGACCATGGGAGGAGCATGTGGC
TATGGAAACTTGTTCCTTAACGGTTACGGGACAGACACAGTGGCTTTGAGCTCCACACTG
TTTAACAATGGATATTCTTGTGGGAGTTGTTACCAGATCAAGTGTGTTCAGTCAAGTGCA
TGCTATAAAGGGTCCCCATACACCACAGTCACTGCTACAAACCTTTGCCCACCTAATTGG
GCCCAGGACTCCAATGCCGGTGGCTGGTGCAACCCACCACGGGTCCATTTCGACATGTCC
AAGCCCGCCTTCATGAAAATTGCTCAGTGGAAGGCTGGCATTATCCCAGTCATGTACCGC
AGAGTACCATGTGTTAAGCGTGGCGGGCTTCAATTTTCTTTCCAAGGGAACGGATACTGG
CTGTTGGTATATGTGATGAATGTTGGTGGAGGAGGAGATATCGCGAGCATGTGGGTGAAG
GGAAGCAAAACAGGGTGGATTAGTATGAGCCACAACTGGGGGGCCTCATACCAGGCGTTT
GCAACTCTGAAAGGCCAAGCTCTTTCTTTTAAGCTCATCTCCTACTCAACCAAGCAGATT
CTAGTAGCAAACAATGTGGCTCCCTCTAACTGGAATGTAGGAATGACTTACAAGGCCAAT
GTGAACTTCCATTGA

Peptide Sequence

PEP ID

VIT_02s0025g04700.t01
PEP Infomation

pep chromosome:12X:2:4249303:4250807:-1 gene:VIT_02s0025g04700 transcript:VIT_02s0025g04700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:D7TWA0]
Sequence

MASSLHSWGCRFLFMGLVFTIIAKSTLAVAPVFRPSRWALAHATFYGDDTASETMGGACG
YGNLFLNGYGTDTVALSSTLFNNGYSCGSCYQIKCVQSSACYKGSPYTTVTATNLCPPNW
AQDSNAGGWCNPPRVHFDMSKPAFMKIAQWKAGIIPVMYRRVPCVKRGGLQFSFQGNGYW
LLVYVMNVGGGGDIASMWVKGSKTGWISMSHNWGASYQAFATLKGQALSFKLISYSTKQI
LVANNVAPSNWNVGMTYKANVNFH

Transcript Sequence

Transcript ID

VIT_02s0025g04700.t01
Transcript Infomation

cdna chromosome:12X:2:4249303:4250807:-1 gene:VIT_02s0025g04700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:D7TWA0]
Sequence

ATGGCTTCTTCCCTTCACTCATGGGGCTGCAGGTTCCTCTTCATGGGATTGGTATTCACA
ATCATTGCCAAATCAACCCTCGCTGTTGCACCTGTCTTCAGGCCAAGCCGATGGGCACTT
GCGCATGCCACCTTTTATGGCGACGACACCGCCTCCGAGACCATGGGAGGAGCATGTGGC
TATGGAAACTTGTTCCTTAACGGTTACGGGACAGACACAGTGGCTTTGAGCTCCACACTG
TTTAACAATGGATATTCTTGTGGGAGTTGTTACCAGATCAAGTGTGTTCAGTCAAGTGCA
TGCTATAAAGGGTCCCCATACACCACAGTCACTGCTACAAACCTTTGCCCACCTAATTGG
GCCCAGGACTCCAATGCCGGTGGCTGGTGCAACCCACCACGGGTCCATTTCGACATGTCC
AAGCCCGCCTTCATGAAAATTGCTCAGTGGAAGGCTGGCATTATCCCAGTCATGTACCGC
AGAGTACCATGTGTTAAGCGTGGCGGGCTTCAATTTTCTTTCCAAGGGAACGGATACTGG
CTGTTGGTATATGTGATGAATGTTGGTGGAGGAGGAGATATCGCGAGCATGTGGGTGAAG
GGAAGCAAAACAGGGTGGATTAGTATGAGCCACAACTGGGGGGCCTCATACCAGGCGTTT
GCAACTCTGAAAGGCCAAGCTCTTTCTTTTAAGCTCATCTCCTACTCAACCAAGCAGATT
CTAGTAGCAAACAATGTGGCTCCCTCTAACTGGAATGTAGGAATGACTTACAAGGCCAAT
GTGAACTTCCATTGAT