Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g04520.t01
CDS Infomation

cds chromosome:12X:2:4020519:4024475:-1 gene:VIT_02s0025g04520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACATAGCACAGATTGGAAAATCAAGCGAGCTTTCAACCTGGTCCTGCAACTGTTAT
AAGACCACGGGCTTGACTGAACCAATTTTGGAGTTGACCCAAGTCTCAAATTTGAAAGAC
CGATATGTTCTTGGAGAGCAATTGGGGTGTGGGCAGTTTGGTGTCATTAGAGCTTGCTCT
GATAAGTTGACCGGTGAGATGTTGGCTTGCAAATCCATCGCCAAGGAGAGATTGACGACA
AGTGATGATGTGTGCAGTGTCAAGCTTGAGATTGAAATAATGACGAGGTTATCTGGGCAC
CCAAATGTTGTAGATCTCAAGGCAGTTTATGAGGAAGAGGATTATGTGCATTTAGTGATG
GAGTTATGTGCAGGTGGAGAGCTTTTTCACAGGCTTGAGAAGCAGGGGATGTTCTCTGAG
TGTGAGGCTAGGGATATTTTTAGGCATCTGATGCAAGTTGTTATGTATTGTCATGACAAA
GGTGTTGTTCACCGAGATTTGAAGCCGGAAAACATCCTCTTGGCCACAAAGTCTTCATCC
TCGCCGATTAAATTGGCAGACTTTGGTCTTGCAACCTATATCAAACCTGGGCAGAGTTTG
CATGGGACTGTAGGGAGTCCATTTTATATAGCTCCTGAGGTACTGGCTGGGGGTTATAAT
CAGGCTGCTGATGTGTGGAGTACCGGGGTTATCCTGTACATACTCCTTAGCGGCATGCCA
CCATTTTGGGGGAAAACCAAGTCAAGGATATTTGATGCTGTTAGGGCAGCAGATCTGTGG
TTCCCTCCTAATCCATGGGATTATATATCTGCATCTGCCAAGGAGTTAATCACTGGAATG
CTGTGTGTAGATCCTTCCAAGAGGCTCACTGCTGCACAGGTTCTCGCTCACTCCTGGATG
AAGGATTTTGTGGAGTCAAGTCAAGAACCATACAAGCGTAAGGATCCAAGATCTGGGCAA
CTGGAACTGGGTGGCAGCTCTTTCTCTACTCCTTTGATTGCCAGGAATCAGGACTATAGC
TTCAGTTATGAATCACCCATAACTAGTGATGGCCAAATGGGAACTTCACCTGCATTTACA
TGCAGATCATCATTTTCTACTTTCCTGGTTGACAACAATGCACCTTGCTCAGTATCTGGA
GGTTTTTCTTTTAGCAGCTGCTGTGAATCAGCTGCACGAGAATTCCCATCTCCAGTTCCC
TCACTGCCAAGCTTTACCTTCTTCAGTCCAAGTTCTGAAATTGATAGAGGAAATCACCTG
CCAGCGTATGAAGCCAACTTGTCAACCTTGGATGACACAAGTGGAGAATCAAGGTTGTCC
AAGGCACTTGTGTTTCCAGATTCCCCGCTTCCTGTAAGGCATGACATAGGAGAAACAGAA
CATAGGACAGAAATCCGGAGGGGAGGGACAAGTGGGTACAAGGCTTCAGTCATCCACAGC
AAAAGGAATCACACTATTGGACTGGGTGAGCAAGATCAGCTTGACCTCATCGTGACCGAA
TCAGTTATCCGCTGGGCATCATGCACACATATCCAGGGTGCGCCATCTCTTAGGTCCTCA
CTTGTCTGCTAA

Peptide Sequence

PEP ID

VIT_02s0025g04520.t01
PEP Infomation

pep chromosome:12X:2:4020519:4024475:-1 gene:VIT_02s0025g04520 transcript:VIT_02s0025g04520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDIAQIGKSSELSTWSCNCYKTTGLTEPILELTQVSNLKDRYVLGEQLGCGQFGVIRACS
DKLTGEMLACKSIAKERLTTSDDVCSVKLEIEIMTRLSGHPNVVDLKAVYEEEDYVHLVM
ELCAGGELFHRLEKQGMFSECEARDIFRHLMQVVMYCHDKGVVHRDLKPENILLATKSSS
SPIKLADFGLATYIKPGQSLHGTVGSPFYIAPEVLAGGYNQAADVWSTGVILYILLSGMP
PFWGKTKSRIFDAVRAADLWFPPNPWDYISASAKELITGMLCVDPSKRLTAAQVLAHSWM
KDFVESSQEPYKRKDPRSGQLELGGSSFSTPLIARNQDYSFSYESPITSDGQMGTSPAFT
CRSSFSTFLVDNNAPCSVSGGFSFSSCCESAAREFPSPVPSLPSFTFFSPSSEIDRGNHL
PAYEANLSTLDDTSGESRLSKALVFPDSPLPVRHDIGETEHRTEIRRGGTSGYKASVIHS
KRNHTIGLGEQDQLDLIVTESVIRWASCTHIQGAPSLRSSLVC

Transcript Sequence

Transcript ID

VIT_02s0025g04520.t01
Transcript Infomation

cdna chromosome:12X:2:4020519:4024475:-1 gene:VIT_02s0025g04520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGATTTGATAATGTTGGAATATAGAAGTGAAGTTTTGATTGGTCTCTTCTAATAATCAG
AATTGTGATAGTTTGGGATGGACATAGCACAGATTGGAAAATCAAGCGAGCTTTCAACCT
GGTCCTGCAACTGTTATAAGACCACGGGCTTGACTGAACCAATTTTGGAGTTGACCCAAG
TCTCAAATTTGAAAGACCGATATGTTCTTGGAGAGCAATTGGGGTGTGGGCAGTTTGGTG
TCATTAGAGCTTGCTCTGATAAGTTGACCGGTGAGATGTTGGCTTGCAAATCCATCGCCA
AGGAGAGATTGACGACAAGTGATGATGTGTGCAGTGTCAAGCTTGAGATTGAAATAATGA
CGAGGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAGGAAGAGGATT
ATGTGCATTTAGTGATGGAGTTATGTGCAGGTGGAGAGCTTTTTCACAGGCTTGAGAAGC
AGGGGATGTTCTCTGAGTGTGAGGCTAGGGATATTTTTAGGCATCTGATGCAAGTTGTTA
TGTATTGTCATGACAAAGGTGTTGTTCACCGAGATTTGAAGCCGGAAAACATCCTCTTGG
CCACAAAGTCTTCATCCTCGCCGATTAAATTGGCAGACTTTGGTCTTGCAACCTATATCA
AACCTGGGCAGAGTTTGCATGGGACTGTAGGGAGTCCATTTTATATAGCTCCTGAGGTAC
TGGCTGGGGGTTATAATCAGGCTGCTGATGTGTGGAGTACCGGGGTTATCCTGTACATAC
TCCTTAGCGGCATGCCACCATTTTGGGGGAAAACCAAGTCAAGGATATTTGATGCTGTTA
GGGCAGCAGATCTGTGGTTCCCTCCTAATCCATGGGATTATATATCTGCATCTGCCAAGG
AGTTAATCACTGGAATGCTGTGTGTAGATCCTTCCAAGAGGCTCACTGCTGCACAGGTTC
TCGCTCACTCCTGGATGAAGGATTTTGTGGAGTCAAGTCAAGAACCATACAAGCGTAAGG
ATCCAAGATCTGGGCAACTGGAACTGGGTGGCAGCTCTTTCTCTACTCCTTTGATTGCCA
GGAATCAGGACTATAGCTTCAGTTATGAATCACCCATAACTAGTGATGGCCAAATGGGAA
CTTCACCTGCATTTACATGCAGATCATCATTTTCTACTTTCCTGGTTGACAACAATGCAC
CTTGCTCAGTATCTGGAGGTTTTTCTTTTAGCAGCTGCTGTGAATCAGCTGCACGAGAAT
TCCCATCTCCAGTTCCCTCACTGCCAAGCTTTACCTTCTTCAGTCCAAGTTCTGAAATTG
ATAGAGGAAATCACCTGCCAGCGTATGAAGCCAACTTGTCAACCTTGGATGACACAAGTG
GAGAATCAAGGTTGTCCAAGGCACTTGTGTTTCCAGATTCCCCGCTTCCTGTAAGGCATG
ACATAGGAGAAACAGAACATAGGACAGAAATCCGGAGGGGAGGGACAAGTGGGTACAAGG
CTTCAGTCATCCACAGCAAAAGGAATCACACTATTGGACTGGGTGAGCAAGATCAGCTTG
ACCTCATCGTGACCGAATCAGTTATCCGCTGGGCATCATGCACACATATCCAGGGTGCGC
CATCTCTTAGGTCCTCACTTGTCTGCTAAAGATCATTACACAGTGGGTGCTACAATTACA
ATACACTCATACACAAGGGGAAGGGGAAGGGGAAGATAAATTAAAATTATGGCTACAAAC
AGGAATGAGGGAATGGGACTCACTTGAGAACTTGATGAAGATATTGATCAATCTGAGGAG
CTGAACTCTGGGGCACAGGGCCTATCTATCTGACTTGTAGTTCATGTAGTGAGATAATCA
AAAGAGTAATGATGCTTTTTTTCTCAGTGAGTACTTTGGAATTCAGTTTGTTGACTCCAT
AAATCTTTATGACCTAACTGGAAATATCAAACATTGTTTGCAACAACAATATTAATTGGG
GAAGGAAGAGTTATTCC