Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g04420.t01
CDS Infomation

cds chromosome:12X:2:3893849:3895803:-1 gene:VIT_02s0025g04420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6HUH6]
Sequence

ATGTGTCAGTTACCTTCATCTGCTGTCGCTTATAAGTTCCGTTCAGACCAAACTGGGTTG
TTGTCTGCCGTAGAACAGGAACCCCACATGCTCACTCCTTTGGTCCCCAAGGCCCCAACA
CTTGATGATCAGCCTCATGGACAAGAACAAAACCCCAGTAAAACCCACCTCTCTCTTGCG
CTTACAGAAGCCAGACACATAGCCAGTATAGCTTTTCCCATGATATTAACGGGTCTTTTA
CTCTACTCCCGTTCCATGATTTCCATGCTCTTCCTCGGTCGCCTAGGGGAGCTTGCCCTA
GCAGGCGGTTCACTCGCGATTGGATTCGCTAACATCACCGGATATTCTATTCTCTCTGGC
CTTGCTATGGGAATGGAACCAATTTGTGGGCAAGCTTTTGGAGCTCAGAGATATAAGCTT
CTTGGCCTCACCTTGCAGAGAACGGTGCTTTTGCTTCTTTTAACGTCAATTCCTATAGCT
TTTCTATGGTTTAACATGAAGGAAATTCTGCTCTTCTGTGGTCAAGATGAAGATATTGCC
ACCGAAGCTCAATCCTACATTCTTTATTCTCTTCCTGACCTTGTCGCACAGTCGTTTCTC
CACCCTCTGCGTATCTATCTTCGAACCCAGTCCATAACACTGCCCCTAACCTACTGTGCA
ACTCTCGCAATTCTTCTCCACATCCCCATCAATTACTTTCTCGTTTCAGTGCTTGATCTC
GGAATCAAAGGCGTTGCTCTAAGCGGAATTTGGACAAACCTCAACCTCGTAGGATCCTTG
ATAGCCTACGTTGTAGTATCGAGAGTTTACAAGAAAACTTGGGGAGGTGTCTCCTCTGAA
TGCTTGAGAGACTGGAAATCTCTCTTGAATTTAGCTGTTCCCAGCTGCATTTCGGTGTGT
TTAGAATGGTGGTGGTACGAAATCATGATCTTGCTATGTGGGCTATTACTCAATCCTCGA
GCAACCGTGGCTTCAATGGGCATTCTGATCCAAACCACAGCTCTCATCTACATTTTCCCG
TCTTCTCTCAGCTTCAGCTTATCAACAAGGGTCGGAAACGAACTGGGTGCTAACCGTCCC
GAGAAAGCGCGATTGGCTGCAATAGTTGGCCTCTCCTCTAGCTTCATATTGGGATTTCTG
GCACTGTTTTTCGCTGTAATGGTCAGGAAAACATGGGCCACCATGTTCACTCAAGACCCC
GAGATTCTCACATTAACATCAATGGTCCTACCTATAATTGGACTATGCGAGCTCGGAAAC
TGCCCACAAACAACAGGCTGTGGTGCCCTCAGAGGCACAGCTCGGCCTAAATTGGGAGCC
AACATCAACCTAGGCTGCTTCTATCTAGTGGGCATGCCAGTTGCAGTATGGCTAGGTTTC
TTCGCAGGGTTCGACTTCAAAGGCCTATGGCTGGGTCTGCTGGCCGCGCAGGGCTCATGC
GCAGTGACAATGTTGTTTGTTCTGTTTCAGACCAATTGGGACCAACAAGCCCAGAGAGCC
AAGGAGCTGACTGGAACCGGCTCTGATGACGATGAAGAGAGTGTGACATTGAAGGATGAA
ACCACCCAGGACTCCACGAATTCGTTAGTGTAA

Peptide Sequence

PEP ID

VIT_02s0025g04420.t01
PEP Infomation

pep chromosome:12X:2:3893849:3895803:-1 gene:VIT_02s0025g04420 transcript:VIT_02s0025g04420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6HUH6]
Sequence

MCQLPSSAVAYKFRSDQTGLLSAVEQEPHMLTPLVPKAPTLDDQPHGQEQNPSKTHLSLA
LTEARHIASIAFPMILTGLLLYSRSMISMLFLGRLGELALAGGSLAIGFANITGYSILSG
LAMGMEPICGQAFGAQRYKLLGLTLQRTVLLLLLTSIPIAFLWFNMKEILLFCGQDEDIA
TEAQSYILYSLPDLVAQSFLHPLRIYLRTQSITLPLTYCATLAILLHIPINYFLVSVLDL
GIKGVALSGIWTNLNLVGSLIAYVVVSRVYKKTWGGVSSECLRDWKSLLNLAVPSCISVC
LEWWWYEIMILLCGLLLNPRATVASMGILIQTTALIYIFPSSLSFSLSTRVGNELGANRP
EKARLAAIVGLSSSFILGFLALFFAVMVRKTWATMFTQDPEILTLTSMVLPIIGLCELGN
CPQTTGCGALRGTARPKLGANINLGCFYLVGMPVAVWLGFFAGFDFKGLWLGLLAAQGSC
AVTMLFVLFQTNWDQQAQRAKELTGTGSDDDEESVTLKDETTQDSTNSLV

Transcript Sequence

Transcript ID

VIT_02s0025g04420.t01
Transcript Infomation

cdna chromosome:12X:2:3893849:3895803:-1 gene:VIT_02s0025g04420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6HUH6]
Sequence

CCCCAAAAGCCTCTCTTTATCTCTCTTTCACTCTCTCTCTGTGTCTCAACTCAAGCACCC
ATGTGTCAGTTACCTTCATCTGCTGTCGCTTATAAGTTCCGTTCAGACCAAACTGGGTTG
TTGTCTGCCGTAGAACAGGAACCCCACATGCTCACTCCTTTGGTCCCCAAGGCCCCAACA
CTTGATGATCAGCCTCATGGACAAGAACAAAACCCCAGTAAAACCCACCTCTCTCTTGCG
CTTACAGAAGCCAGACACATAGCCAGTATAGCTTTTCCCATGATATTAACGGGTCTTTTA
CTCTACTCCCGTTCCATGATTTCCATGCTCTTCCTCGGTCGCCTAGGGGAGCTTGCCCTA
GCAGGCGGTTCACTCGCGATTGGATTCGCTAACATCACCGGATATTCTATTCTCTCTGGC
CTTGCTATGGGAATGGAACCAATTTGTGGGCAAGCTTTTGGAGCTCAGAGATATAAGCTT
CTTGGCCTCACCTTGCAGAGAACGGTGCTTTTGCTTCTTTTAACGTCAATTCCTATAGCT
TTTCTATGGTTTAACATGAAGGAAATTCTGCTCTTCTGTGGTCAAGATGAAGATATTGCC
ACCGAAGCTCAATCCTACATTCTTTATTCTCTTCCTGACCTTGTCGCACAGTCGTTTCTC
CACCCTCTGCGTATCTATCTTCGAACCCAGTCCATAACACTGCCCCTAACCTACTGTGCA
ACTCTCGCAATTCTTCTCCACATCCCCATCAATTACTTTCTCGTTTCAGTGCTTGATCTC
GGAATCAAAGGCGTTGCTCTAAGCGGAATTTGGACAAACCTCAACCTCGTAGGATCCTTG
ATAGCCTACGTTGTAGTATCGAGAGTTTACAAGAAAACTTGGGGAGGTGTCTCCTCTGAA
TGCTTGAGAGACTGGAAATCTCTCTTGAATTTAGCTGTTCCCAGCTGCATTTCGGTGTGT
TTAGAATGGTGGTGGTACGAAATCATGATCTTGCTATGTGGGCTATTACTCAATCCTCGA
GCAACCGTGGCTTCAATGGGCATTCTGATCCAAACCACAGCTCTCATCTACATTTTCCCG
TCTTCTCTCAGCTTCAGCTTATCAACAAGGGTCGGAAACGAACTGGGTGCTAACCGTCCC
GAGAAAGCGCGATTGGCTGCAATAGTTGGCCTCTCCTCTAGCTTCATATTGGGATTTCTG
GCACTGTTTTTCGCTGTAATGGTCAGGAAAACATGGGCCACCATGTTCACTCAAGACCCC
GAGATTCTCACATTAACATCAATGGTCCTACCTATAATTGGACTATGCGAGCTCGGAAAC
TGCCCACAAACAACAGGCTGTGGTGCCCTCAGAGGCACAGCTCGGCCTAAATTGGGAGCC
AACATCAACCTAGGCTGCTTCTATCTAGTGGGCATGCCAGTTGCAGTATGGCTAGGTTTC
TTCGCAGGGTTCGACTTCAAAGGCCTATGGCTGGGTCTGCTGGCCGCGCAGGGCTCATGC
GCAGTGACAATGTTGTTTGTTCTGTTTCAGACCAATTGGGACCAACAAGCCCAGAGAGCC
AAGGAGCTGACTGGAACCGGCTCTGATGACGATGAAGAGAGTGTGACATTGAAGGATGAA
ACCACCCAGGACTCCACGAATTCGTTAGTGTAAAAAATTGGGCTCATCACATTGCGTGTG
ATGGCTAAAGCCTACGACCATCCCTTATTGGATTTCAACAGGGGAGTTGCCGTACACTGA
CCTTGTACTCTACTATTCAAATTCAATCAACATAGAATAGTCGGTCCGTGCTAGGACAAA
TTTTTTTGGTTCATTTCCGTTGTTCACAATTTTTGATTATTTGTAAATAGGATAAGATTG
AAATGTAAGAGAGTTGTTAATCGTTAGGGCCCTTTCTTCTAATTCTTTTGTTTGTCTGTG
TCCCGGTCAAAACTCAAAAGCACTTGCAATACTTC