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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g04200.t01
CDS Infomation

cds chromosome:12X:2:3727245:3728781:-1 gene:VIT_02s0025g04200 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7TW55]
Sequence

ATGAAAGAAGAAAAAGACTTGGTGGTGATTGCTTGTAGGTTAATGGCTGGCGTTTCACCT
GCAGCGGCTCTTTCTCCAGCAACACAGCCATTACCAACAGCATCTCCGGTAATACAGCCG
GTATCAACACCATCTCCATCAACACAGCTGTTTCCAACACCATCTCCTTTCTCCTTCTCA
GTTGCCACTACAGGGTGGAGCTCTAGACCCTCTGTCTATTTTTCCCATTGCTTCCTCCGA
AGCTTGGCTCTTCTTTTCTCTTTTGTCTCTGCTCTCTCCCTCACGGTCACGGCCCCATCA
AGTGGACGAGCTGGCTTCACAAAGTACCCAGAATTAACGTACTGTTTGGTTGTAACCATT
TTGGCTCTCACTTACTCAGCCTTCCAACTATGTAAAGGTGTTTGTGACATTACCCACAAA
GGCTTTCTCATCTCAGACAGGGTGTCCGACTACAGTAGCTTCATTCTTGATCAGTTGGTG
GGTTATCTTCTTGCATCCTCTTCTTCGGTGATAATACCAGCCATTCAGCGGCTGGAACAA
ACTGCACTCTGGAAGGCAGGCATAGTCTCTGTTTGCATGTCCTTTGCAGCTTTCCTTGTT
ACCGCAATCTGTGCCCTCTTTTCAGGCTACAAACTTTGTAAGAGAGTCATATGGTGA

Peptide Sequence

PEP ID

VIT_02s0025g04200.t01
PEP Infomation

pep chromosome:12X:2:3727245:3728781:-1 gene:VIT_02s0025g04200 transcript:VIT_02s0025g04200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7TW55]
Sequence

MKEEKDLVVIACRLMAGVSPAAALSPATQPLPTASPVIQPVSTPSPSTQLFPTPSPFSFS
VATTGWSSRPSVYFSHCFLRSLALLFSFVSALSLTVTAPSSGRAGFTKYPELTYCLVVTI
LALTYSAFQLCKGVCDITHKGFLISDRVSDYSSFILDQLVGYLLASSSSVIIPAIQRLEQ
TALWKAGIVSVCMSFAAFLVTAICALFSGYKLCKRVIW

Transcript Sequence

Transcript ID

VIT_02s0025g04200.t01
Transcript Infomation

cdna chromosome:12X:2:3727245:3728781:-1 gene:VIT_02s0025g04200 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7TW55]
Sequence

CCCTTCCATTCTTCAGGAATATTATCTCTAAAGAGATAGAAAAGAGAGGGCGCAATGAAA
GAAGAAAAAGACTTGGTGGTGATTGCTTGTAGGTTAATGGCTGGCGTTTCACCTGCAGCG
GCTCTTTCTCCAGCAACACAGCCATTACCAACAGCATCTCCGGTAATACAGCCGGTATCA
ACACCATCTCCATCAACACAGCTGTTTCCAACACCATCTCCTTTCTCCTTCTCAGTTGCC
ACTACAGGGTGGAGCTCTAGACCCTCTGTCTATTTTTCCCATTGCTTCCTCCGAAGCTTG
GCTCTTCTTTTCTCTTTTGTCTCTGCTCTCTCCCTCACGGTCACGGCCCCATCAAGTGGA
CGAGCTGGCTTCACAAAGTACCCAGAATTAACGTACTGTTTGGTTGTAACCATTTTGGCT
CTCACTTACTCAGCCTTCCAACTATGTAAAGGTGTTTGTGACATTACCCACAAAGGCTTT
CTCATCTCAGACAGGGTGTCCGACTACAGTAGCTTCATTCTTGATCAGTTGGTGGGTTAT
CTTCTTGCATCCTCTTCTTCGGTGATAATACCAGCCATTCAGCGGCTGGAACAAACTGCA
CTCTGGAAGGCAGGCATAGTCTCTGTTTGCATGTCCTTTGCAGCTTTCCTTGTTACCGCA
ATCTGTGCCCTCTTTTCAGGCTACAAACTTTGTAAGAGAGTCATATGGTGATGCCATCCT
GGTGTAAATAGTTCCCCCATTATTAATCTGAACTTCTCTGCTTCAATAAATAGGAAATGT
AATAACACAGAAGTTCCTCTATCATGCTTACACTATTAGTTTTTTCAGTA