Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g04020.t01
CDS Infomation

cds chromosome:12X:2:3522976:3526324:-1 gene:VIT_02s0025g04020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTAGCCATGTTAGCAGAAGGAACCAGCTTCTTCGATGTCTTCTTGCCTTTCCTCCTC
CTCCTCCCACTTCTGGTCTTTCTCATCCTAAAGCTTTTAAAAGATTCATCTTCGCTCAAA
TCTCCACCACTCCCACCAGGACCTTCTCCATGGCCAATCTTAGGCAATCTTTTGCATCTG
GGAAACATGCCTCACATCAGTTTAGCTCGCTTTAGCCAGTCCTATGGTCCTCTCATCTCG
CTAAGACTCGGATCCCAAATCTTGGTGGTGGCATCAACATCCTCCGCCGCCATGGAAATT
CTCAAGACACATGATCGTGTTCTATCTGGTAGATATGTTCCTCACGCAGTACCAGCCAAG
AATTCTGAAATCAACCCCATGTCTCTTGGATGGGCAGTTGAGTGCAATGGTGCATGGAAG
AATCTAAGGACAGTTTGTAGGGCTGAACTTTTCTCAACCAAAGTAATGGAGTCTCAAGCA
TGGGTGGGAGAGAAGAAGGTGATGGAGATGGTGAGATTTGTGAGCACAAAGGAGGGGGAG
GTGATGAAAGTTGGAGAAGTGGTGTTTGCTACTGTACTTAATACCCTGACTACTGTTCTT
ATGTCCAGAGATTTTATCAGCTTTGAGGATGATAATAAGGATGGAGGCATGAAAGGACTT
GTAAGGAAAATGGTGATGGCCATGGCTGCTCCGAATTTGGATGATTTTTATTTAATTTTC
AGTGGATTGGATCTTCAAGGTCTGAACAAGAAGACCAAGGAGCTGATTGCAAGGATTTGT
TCTATGTGGGAGTCTGTCATCAGAGAGAGAAGAGAAGGTGCAAGCGATGACCCAAGCAAG
CAGGACTTCTTGAATATTCTGATCCGCAGCGGCTACTCGGATGATCAAATCAATCAATTG
TTCATGGAGTTGCTTACTGCAGGGGCAGACACCAGTAGTTCAACATTGGAGTGGGCAATG
GCAGAACTGATAAAAAGTCCAGAATCCATGAAGAAAGTCCATGAAGAACTTGCAAGAGAA
ATCAGTGATAATCTGCCAAAAGCATCTGATCTACCTCACCTACCATACCTCCAAGCCTGT
GTCAAAGAAACCCTGAGGCTGCACCCCTCGGCACCATTGCTCCTTCCTCGCCGTGCATCA
GTCTCATGTGAAGTTATGAATTATACCATTCCAAAGGACTCTCAAATATGGGTAAATGCC
TGGGCAATTGGGAGAGACCCCATGAATTGGGAAGACCCTCTAGTGTTTAAACCAGAGCGC
TTCCTCAACTCAGCTGTAGACTTCAAAGGGAATAATCTAGAATTCATACCCTTTGGTGCT
GGAAGGAGAATATGCCCTGGTCTGCCCATGGCTGCAAGGCTTCTTCCTTTGATTCTTGCC
TCCTTGACCCATTTCTTTGATTGGTCTCTTCCAAATGGAACCACTCCAGATGAGCTAGAC
ATGAACGATAAGTTCGGTGTAACATTGCAGAAGGAACAACCTCTACTCATCATTCCTAAA
GTTCGAAAATGA

Peptide Sequence

PEP ID

VIT_02s0025g04020.t01
PEP Infomation

pep chromosome:12X:2:3522976:3526324:-1 gene:VIT_02s0025g04020 transcript:VIT_02s0025g04020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVAMLAEGTSFFDVFLPFLLLLPLLVFLILKLLKDSSSLKSPPLPPGPSPWPILGNLLHL
GNMPHISLARFSQSYGPLISLRLGSQILVVASTSSAAMEILKTHDRVLSGRYVPHAVPAK
NSEINPMSLGWAVECNGAWKNLRTVCRAELFSTKVMESQAWVGEKKVMEMVRFVSTKEGE
VMKVGEVVFATVLNTLTTVLMSRDFISFEDDNKDGGMKGLVRKMVMAMAAPNLDDFYLIF
SGLDLQGLNKKTKELIARICSMWESVIRERREGASDDPSKQDFLNILIRSGYSDDQINQL
FMELLTAGADTSSSTLEWAMAELIKSPESMKKVHEELAREISDNLPKASDLPHLPYLQAC
VKETLRLHPSAPLLLPRRASVSCEVMNYTIPKDSQIWVNAWAIGRDPMNWEDPLVFKPER
FLNSAVDFKGNNLEFIPFGAGRRICPGLPMAARLLPLILASLTHFFDWSLPNGTTPDELD
MNDKFGVTLQKEQPLLIIPKVRK

Transcript Sequence

Transcript ID

VIT_02s0025g04020.t01
Transcript Infomation

cdna chromosome:12X:2:3522976:3526324:-1 gene:VIT_02s0025g04020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTACTTTCCCTCCTCATCCCAATCGAATTCATGGTAGCCATGTTAGCAGAAGGAACCAG
CTTCTTCGATGTCTTCTTGCCTTTCCTCCTCCTCCTCCCACTTCTGGTCTTTCTCATCCT
AAAGCTTTTAAAAGATTCATCTTCGCTCAAATCTCCACCACTCCCACCAGGACCTTCTCC
ATGGCCAATCTTAGGCAATCTTTTGCATCTGGGAAACATGCCTCACATCAGTTTAGCTCG
CTTTAGCCAGTCCTATGGTCCTCTCATCTCGCTAAGACTCGGATCCCAAATCTTGGTGGT
GGCATCAACATCCTCCGCCGCCATGGAAATTCTCAAGACACATGATCGTGTTCTATCTGG
TAGATATGTTCCTCACGCAGTACCAGCCAAGAATTCTGAAATCAACCCCATGTCTCTTGG
ATGGGCAGTTGAGTGCAATGGTGCATGGAAGAATCTAAGGACAGTTTGTAGGGCTGAACT
TTTCTCAACCAAAGTAATGGAGTCTCAAGCATGGGTGGGAGAGAAGAAGGTGATGGAGAT
GGTGAGATTTGTGAGCACAAAGGAGGGGGAGGTGATGAAAGTTGGAGAAGTGGTGTTTGC
TACTGTACTTAATACCCTGACTACTGTTCTTATGTCCAGAGATTTTATCAGCTTTGAGGA
TGATAATAAGGATGGAGGCATGAAAGGACTTGTAAGGAAAATGGTGATGGCCATGGCTGC
TCCGAATTTGGATGATTTTTATTTAATTTTCAGTGGATTGGATCTTCAAGGTCTGAACAA
GAAGACCAAGGAGCTGATTGCAAGGATTTGTTCTATGTGGGAGTCTGTCATCAGAGAGAG
AAGAGAAGGTGCAAGCGATGACCCAAGCAAGCAGGACTTCTTGAATATTCTGATCCGCAG
CGGCTACTCGGATGATCAAATCAATCAATTGTTCATGGAGTTGCTTACTGCAGGGGCAGA
CACCAGTAGTTCAACATTGGAGTGGGCAATGGCAGAACTGATAAAAAGTCCAGAATCCAT
GAAGAAAGTCCATGAAGAACTTGCAAGAGAAATCAGTGATAATCTGCCAAAAGCATCTGA
TCTACCTCACCTACCATACCTCCAAGCCTGTGTCAAAGAAACCCTGAGGCTGCACCCCTC
GGCACCATTGCTCCTTCCTCGCCGTGCATCAGTCTCATGTGAAGTTATGAATTATACCAT
TCCAAAGGACTCTCAAATATGGGTAAATGCCTGGGCAATTGGGAGAGACCCCATGAATTG
GGAAGACCCTCTAGTGTTTAAACCAGAGCGCTTCCTCAACTCAGCTGTAGACTTCAAAGG
GAATAATCTAGAATTCATACCCTTTGGTGCTGGAAGGAGAATATGCCCTGGTCTGCCCAT
GGCTGCAAGGCTTCTTCCTTTGATTCTTGCCTCCTTGACCCATTTCTTTGATTGGTCTCT
TCCAAATGGAACCACTCCAGATGAGCTAGACATGAACGATAAGTTCGGTGTAACATTGCA
GAAGGAACAACCTCTACTCATCATTCCTAAAGTTCGAAAATGATTCCTTCACATGCAATT
ATATTCCTAATTTCCCGAGCAAACATCTCCTCTACTTTCATCCTCACTGGGCTATCCAAT
GGAAGACTATAATCAATTGAATCAAATATGGCAGAGTAGTATCTCAGTG