Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g03290.t01
CDS Infomation

cds chromosome:12X:2:2809918:2813519:1 gene:VIT_02s0025g03290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAAGCGTGAATGGAGATACGAGAAGTATGAACAGCGCTTTGGAGACTATAAACGCT
GCTGCAACTGCGATCGCCTCAGCTGAGAATCGTGTGCCTCAACCTACCGTTCAGAAAAGA
AGATGGGGGAGCTGCTGGGGTGAATATTGGTGTTTTAGATCTCCTAAAGACAAACGTATT
GGGCATGCAGTCCTTGCTCCTGAATCGAGAGCTCCTGGAAGTGGTGTCCCTGCAGCTGAA
AATCTGACACAGGCACCCACCATAGTGCTACCCTTTGTTGCTCCTCCCTCATCTCCGGCA
TCTTTCCTTCAATCGGAACCTCCTTCTGCAACTCAATCACCATCTGGGTTATTGTCCCTC
ACCTCCATTAATGCCAATATATATTCTCCAGGCGGGCCTGCCTCCATTTTTGCCATTGGA
CCTTATGCCCACGAGACCCAGCTAGTCTCACCCCCTGTGTTCTCAACCTTCACCACTGAA
CCATCAACTGCTCCCTTCACTCCTCCCCCTGAGTCAGTCCACTTGACCACACCCTCTTCC
CCTGAAGTGCCATTTGCTCAACTCTTTGATCCAAACAACCGCAATGGTGAGGCTGGCCAT
AGATTTCTATTATCTCAATATGAATTTCAGTCCTATCAACTTTACCCTGGAAGCCCAGTT
GGCCACCTTATCTCACCGAGCTCAGGGATCTCAGGTTCTGGCACCTCCTCTCCCTTTCCT
GACCGTGACTTTGTTTGTAGTGGTAGTTCCCAATTCCTTGAATTCCGAGCAGGTGGACCT
CCCAAGCTCCTGACCCTTGATAAACTGTCCAACCATGAGTGGGGATCACGGATAGGTTCT
GGTTCAATCACCCCGGATGCTCTGGGTCCACCATCTCGTGATGGTTCTGTTCTGGATCGT
CAGGTTTCTGATGTGATACATCCACCATCTGGTGATGATTCTGTTCTGGATCGCCAGATT
TCTGATGTTGCTTCACATTCACTTTCAGACAGTGGATGCCCCAACAATGAAATTATGGTT
GATCATAGAGTCTCATTTGAGTTGACTGCAGAAGACGTCGTCAGATGTGTTGAAAAGGAC
TCAGCAGCTCTAGTTAAAGCTGTATCGGCTTCTCTGCAAAATCCAGCAACAGTTGAAATA
GATGAAAATTCAAGGGAAGTGGTTGTTGATTCTGAAGGTCGTGTTGGGGAAACAGCCAAT
AACCCACCAGAGAAAGCTCCAGAAGATGCAAATGGGGAGGAGGGACAACCTCATCATAAG
CAACGCTCCATCACTCTTGGGTCTGCTAAAGAATTCAATTTTGACAATGCTGATGGAGGA
CATTCAGATAAGCCCAATATTAGCTCCGACTGGTGGGCCAATGAGAAGGTTGTAGGGAAG
GAGGTTGGCGCCAGTAAGAATTGGTCCATCTTCCATATGATGCAGCCAAGTGTGAGCTAA

Peptide Sequence

PEP ID

VIT_02s0025g03290.t01
PEP Infomation

pep chromosome:12X:2:2809918:2813519:1 gene:VIT_02s0025g03290 transcript:VIT_02s0025g03290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRSVNGDTRSMNSALETINAAATAIASAENRVPQPTVQKRRWGSCWGEYWCFRSPKDKRI
GHAVLAPESRAPGSGVPAAENLTQAPTIVLPFVAPPSSPASFLQSEPPSATQSPSGLLSL
TSINANIYSPGGPASIFAIGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPESVHLTTPSS
PEVPFAQLFDPNNRNGEAGHRFLLSQYEFQSYQLYPGSPVGHLISPSSGISGSGTSSPFP
DRDFVCSGSSQFLEFRAGGPPKLLTLDKLSNHEWGSRIGSGSITPDALGPPSRDGSVLDR
QVSDVIHPPSGDDSVLDRQISDVASHSLSDSGCPNNEIMVDHRVSFELTAEDVVRCVEKD
SAALVKAVSASLQNPATVEIDENSREVVVDSEGRVGETANNPPEKAPEDANGEEGQPHHK
QRSITLGSAKEFNFDNADGGHSDKPNISSDWWANEKVVGKEVGASKNWSIFHMMQPSVS

Transcript Sequence

Transcript ID

VIT_02s0025g03290.t01
Transcript Infomation

cdna chromosome:12X:2:2809918:2813519:1 gene:VIT_02s0025g03290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGGGAGAGGGAGAGGGAGAGATTTGAAGGTGGCTTCATAAATCTGAATTCTTGGTTTC
TTCTCTCTTTTTCTTCTCCAAAATCTCTGTTTGGTTCCTCTGAATTTTTTCTTTTCATTT
TCTGTTTCTCAATCGAATTCGGATTACGTATTGAATTTTCTCGGGAAAATTTCGCATTTT
CGCGAGAAAATTTGAGGAAGGCCGGATTCGCGGATGAAACGAGACGTTTCTCGGGAGAAT
TAAGTTCGAGGAGCGGAGATGAGAAGCGTGAATGGAGATACGAGAAGTATGAACAGCGCT
TTGGAGACTATAAACGCTGCTGCAACTGCGATCGCCTCAGCTGAGAATCGTGTGCCTCAA
CCTACCGTTCAGAAAAGAAGATGGGGGAGCTGCTGGGGTGAATATTGGTGTTTTAGATCT
CCTAAAGACAAACGTATTGGGCATGCAGTCCTTGCTCCTGAATCGAGAGCTCCTGGAAGT
GGTGTCCCTGCAGCTGAAAATCTGACACAGGCACCCACCATAGTGCTACCCTTTGTTGCT
CCTCCCTCATCTCCGGCATCTTTCCTTCAATCGGAACCTCCTTCTGCAACTCAATCACCA
TCTGGGTTATTGTCCCTCACCTCCATTAATGCCAATATATATTCTCCAGGCGGGCCTGCC
TCCATTTTTGCCATTGGACCTTATGCCCACGAGACCCAGCTAGTCTCACCCCCTGTGTTC
TCAACCTTCACCACTGAACCATCAACTGCTCCCTTCACTCCTCCCCCTGAGTCAGTCCAC
TTGACCACACCCTCTTCCCCTGAAGTGCCATTTGCTCAACTCTTTGATCCAAACAACCGC
AATGGTGAGGCTGGCCATAGATTTCTATTATCTCAATATGAATTTCAGTCCTATCAACTT
TACCCTGGAAGCCCAGTTGGCCACCTTATCTCACCGAGCTCAGGGATCTCAGGTTCTGGC
ACCTCCTCTCCCTTTCCTGACCGTGACTTTGTTTGTAGTGGTAGTTCCCAATTCCTTGAA
TTCCGAGCAGGTGGACCTCCCAAGCTCCTGACCCTTGATAAACTGTCCAACCATGAGTGG
GGATCACGGATAGGTTCTGGTTCAATCACCCCGGATGCTCTGGGTCCACCATCTCGTGAT
GGTTCTGTTCTGGATCGTCAGGTTTCTGATGTGATACATCCACCATCTGGTGATGATTCT
GTTCTGGATCGCCAGATTTCTGATGTTGCTTCACATTCACTTTCAGACAGTGGATGCCCC
AACAATGAAATTATGGTTGATCATAGAGTCTCATTTGAGTTGACTGCAGAAGACGTCGTC
AGATGTGTTGAAAAGGACTCAGCAGCTCTAGTTAAAGCTGTATCGGCTTCTCTGCAAAAT
CCAGCAACAGTTGAAATAGATGAAAATTCAAGGGAAGTGGTTGTTGATTCTGAAGGTCGT
GTTGGGGAAACAGCCAATAACCCACCAGAGAAAGCTCCAGAAGATGCAAATGGGGAGGAG
GGACAACCTCATCATAAGCAACGCTCCATCACTCTTGGGTCTGCTAAAGAATTCAATTTT
GACAATGCTGATGGAGGACATTCAGATAAGCCCAATATTAGCTCCGACTGGTGGGCCAAT
GAGAAGGTTGTAGGGAAGGAGGTTGGCGCCAGTAAGAATTGGTCCATCTTCCATATGATG
CAGCCAAGTGTGAGCTAACTACAACTCATCCCCGAGGTACCTCCCATTCTCCTGGAGGCA
TCGCTAGTGGGGGTTGTGTACTAAACAGAATAATTGATAAATCAAATTGTAGAAAAATTT
TGGGTTTTGAATTGGAAGCAAGAACGCATAGCAGGACTGACCCATAAACGAAGGCTGTTT
TTGAAGGACTTCTTGACCTGAAAAATGGGTAGCAGATGGAAATGTTTTGTTAGGGCTTAG
TATGAATAGTGCAATATTTTCCTCTCACGCAGAAACACAAACTAACAGCACTCTTCAGAC
ATTTTGTATGTTTAGTCGTTTTCCTTCTCATTTGTAATGTAATATAAATAATATGATAGA
ACAGTTGTAACAGTGATGTTGATCATGATTAATGATTATACTGATACTTTTTAACTCA