Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g03280.t01
CDS Infomation

cds chromosome:12X:2:2804180:2807528:1 gene:VIT_02s0025g03280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTACAAAACCTTGCTAGGAAGTCAAGGATTCCGAAAAGGCATGGATCTTTATTTTAAG
AGGCATGATGGGCAAGCTGTAACCTGTGAAGATTTCTTTGCTGCCATGAGAGATGCAAAT
GATGCAGATTTTGCTAATTTCTTGTTGTGGTACTCCCAAGCTGGTACGCCTCTCGTGAAG
GTTACTTCTTCCTACAATGCTGAAGCCCATACTTACTCTTTGAAGTTTAGTCAAGAGGTT
CCACCAACTCCAGGACAGCCAGTGAAAGAACCAATGTTCATTCCTGTTGCAGTAGGTTTC
CTGGACTCAACTGGCAAGGAGATGCCCCTCTCATCTGTGTATCATGATGGGACTTTGCAG
TCTGTTGTGAGCAATGATCAGCCAACTTACACTACAGTTCTTCGAGTAACAAAGAAAGAA
GAAGAATTTTTGTTCTCTGATATATCTGAGAAGCCAATTGCATCTCTTTTGCGGGGCTAC
AGTGCTCCTATTCGTCTGGACACTGATCTCACGGACAGCGATTTGTTTTTCCTTCTTGCT
CATGATTCAGATGAGTTCAACCGTTGGGAGGCTGGGCAGGTGTTGGCAAGGAAGCTGATG
CTTGGTTTAGTGGCTGATTTCCAACAAAATAGACCATTGGTTCTGAATCCAAAGTTTGTG
CATGGGCTCAAAAGCATACTTCTTGACTCAAGCTTGGATAAAGAATTCATTGCAAAGGCA
ATAACACTGCCGGGTGAAGGGGAGATCATGGACATTATGGAAGTTGCCGATCCTGATGCA
GTGCATGCTGTTCGATCTTTCATCAGGAAGCAGCTGGCGTCTGAACTGAGAGCAGAGCTC
CTTAGCACAGTTGAAAAGAATAGGAGCTCGGAGGATTATGTGTTTAACCATCCTAATATG
GCTAGACGTGCACTGAAGAATGTTGCCCTTGGATATCTTGCATTATTGGATGATCCAGAA
CTCACCGAGCTTGCATTGCACGAATATAGAACTGCTGCAAATATGACTGAACAGTTTGCA
GCTCTGGCTGCCATAGCCCAGATCCCTGGTAAGACCCGTGATGATGTATTGGCTGACTTC
TACAGCAAGTGGCAGCAAGACTTTTTGGTTGTCAATAAATGGTTTGCCCTTCAAGCCATG
GCAGACATTCCTCAGAATGTTGAGAATGTTCGTAACCTCTTAAACCATCCAGCTTTTGAC
TTACGTAATCCAAACAAGGTATACTCGCTGATTGGAGGATTCTGTGGATCTCCTGTGAAT
TTCCACGCAAAGGACGGGTCAGGCTATAAGTTCTTGGGAGAAATGGTGGTGCAACTGGAT
AAGATCAACCCTCAGGTGGCCTCTCGCATGGTGTCTGCCTTCTCAAGATGGAAGCGTTAT
GATGATACTCGGAAAAGCCTTGCGAAGGCACAGTTGGAGATGATAGTAGCCTGCAATGGA
CTGTCTGAGAATGTGTATGAAATTGCCTCCAAAAGCTTAGCTGCTTAA

Peptide Sequence

PEP ID

VIT_02s0025g03280.t01
PEP Infomation

pep chromosome:12X:2:2804180:2807528:1 gene:VIT_02s0025g03280 transcript:VIT_02s0025g03280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPLVK
VTSSYNAEAHTYSLKFSQEVPPTPGQPVKEPMFIPVAVGFLDSTGKEMPLSSVYHDGTLQ
SVVSNDQPTYTTVLRVTKKEEEFLFSDISEKPIASLLRGYSAPIRLDTDLTDSDLFFLLA
HDSDEFNRWEAGQVLARKLMLGLVADFQQNRPLVLNPKFVHGLKSILLDSSLDKEFIAKA
ITLPGEGEIMDIMEVADPDAVHAVRSFIRKQLASELRAELLSTVEKNRSSEDYVFNHPNM
ARRALKNVALGYLALLDDPELTELALHEYRTAANMTEQFAALAAIAQIPGKTRDDVLADF
YSKWQQDFLVVNKWFALQAMADIPQNVENVRNLLNHPAFDLRNPNKVYSLIGGFCGSPVN
FHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWKRYDDTRKSLAKAQLEMIVACNG
LSENVYEIASKSLAA

Transcript Sequence

Transcript ID

VIT_02s0025g03280.t01
Transcript Infomation

cdna chromosome:12X:2:2804180:2807528:1 gene:VIT_02s0025g03280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGAAGTCAAGGATTCCGAAAAGGC
ATGGATCTTTATTTTAAGAGGCATGATGGGCAAGCTGTAACCTGTGAAGATTTCTTTGCT
GCCATGAGAGATGCAAATGATGCAGATTTTGCTAATTTCTTGTTGTGGTACTCCCAAGCT
GGTACGCCTCTCGTGAAGGTTACTTCTTCCTACAATGCTGAAGCCCATACTTACTCTTTG
AAGTTTAGTCAAGAGGTTCCACCAACTCCAGGACAGCCAGTGAAAGAACCAATGTTCATT
CCTGTTGCAGTAGGTTTCCTGGACTCAACTGGCAAGGAGATGCCCCTCTCATCTGTGTAT
CATGATGGGACTTTGCAGTCTGTTGTGAGCAATGATCAGCCAACTTACACTACAGTTCTT
CGAGTAACAAAGAAAGAAGAAGAATTTTTGTTCTCTGATATATCTGAGAAGCCAATTGCA
TCTCTTTTGCGGGGCTACAGTGCTCCTATTCGTCTGGACACTGATCTCACGGACAGCGAT
TTGTTTTTCCTTCTTGCTCATGATTCAGATGAGTTCAACCGTTGGGAGGCTGGGCAGGTG
TTGGCAAGGAAGCTGATGCTTGGTTTAGTGGCTGATTTCCAACAAAATAGACCATTGGTT
CTGAATCCAAAGTTTGTGCATGGGCTCAAAAGCATACTTCTTGACTCAAGCTTGGATAAA
GAATTCATTGCAAAGGCAATAACACTGCCGGGTGAAGGGGAGATCATGGACATTATGGAA
GTTGCCGATCCTGATGCAGTGCATGCTGTTCGATCTTTCATCAGGAAGCAGCTGGCGTCT
GAACTGAGAGCAGAGCTCCTTAGCACAGTTGAAAAGAATAGGAGCTCGGAGGATTATGTG
TTTAACCATCCTAATATGGCTAGACGTGCACTGAAGAATGTTGCCCTTGGATATCTTGCA
TTATTGGATGATCCAGAACTCACCGAGCTTGCATTGCACGAATATAGAACTGCTGCAAAT
ATGACTGAACAGTTTGCAGCTCTGGCTGCCATAGCCCAGATCCCTGGTAAGACCCGTGAT
GATGTATTGGCTGACTTCTACAGCAAGTGGCAGCAAGACTTTTTGGTTGTCAATAAATGG
TTTGCCCTTCAAGCCATGGCAGACATTCCTCAGAATGTTGAGAATGTTCGTAACCTCTTA
AACCATCCAGCTTTTGACTTACGTAATCCAAACAAGGTATACTCGCTGATTGGAGGATTC
TGTGGATCTCCTGTGAATTTCCACGCAAAGGACGGGTCAGGCTATAAGTTCTTGGGAGAA
ATGGTGGTGCAACTGGATAAGATCAACCCTCAGGTGGCCTCTCGCATGGTGTCTGCCTTC
TCAAGATGGAAGCGTTATGATGATACTCGGAAAAGCCTTGCGAAGGCACAGTTGGAGATG
ATAGTAGCCTGCAATGGACTGTCTGAGAATGTGTATGAAATTGCCTCCAAAAGCTTAGCT
GCTTAAGAATCTATTATTTTACCTCCACTCTTTTTTAATAGGCTATGAATCGGTCAAACT
GTGTTGTGGAAAGCTGGTTTCCCATATAGAAAATATAAATAAAATGACCAGGATGTGTTG
TGGTTGGTGGGATCTTTAATAAAATATGATATCCCCCTCACACTTCACATACTGGTGGAA
GTGCCTTGTGTTATAGAAACTATTTTCATCA