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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g03180.t01
CDS Infomation

cds chromosome:12X:2:2716422:2718224:1 gene:VIT_02s0025g03180 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HUA7]
Sequence

ATGGCTGGATTGAAGAGTTTCGACACATGGAGCCCTGTTATTGTAATGTTAGCTGTTGAT
TTTGCCTTCGCGGTTGTAAATATACTTCTCAAGGAAGTCCTCAATGCAGAAATGAACCAT
TTGGTCCTCATCACATACCGGCAATCAATTTCTACCATTTTCTTGGTCCCCATTGGATAC
TTTTGGGAAAGGAATAGCCGACCCAAGCTCACACTTCGGATCTTATGTTACCTCTTCTTC
AGCGCTCTTGTCGGGGCATCACTGACACAATACTTCTTCCTTCTTGGGATTCAATACACA
TCTGCTACTTTCGCATGTGCTTTTATCAACATGGTCCCTGCAATCACATTTATAATGTCA
TTACCTTTTGGATTAGAGATTGTGAACATAAAAACCAACAGGGGGAGAGCAAAATTAATT
GGAACCTTGGTATGTATCTGTGGAGCCATGATACTGACTCTTTACAAAGGAATGCCTTTA
GTTAAATATTCGCGTCCAGAAGCTCCATCTCCAACCATGGATCAGGCTATCAGCTTGAGC
TCGGGTAAGAAGACAGAGAGATGGACCGTTGGCTCAATAGCTTTGATGGGAGGCACCCTG
TTGTGGTCTTCATGGTTTCTTATTCAGTCAAACATTGGCAAGCTATACCCATGTCAGTAT
TCGAGCACTGCCATCATGTCCTTCTTTGGTGCCATTCAATCAGCAGTCATTAGTTTGTCC
ATGGACAGAAACCTTTCCTTGTGGATTCTGAAAGGGAAAACAGAAATATTAACAGTTATT
TATGCTGGAGTGGTAGGGTCTGGCTTATGCTATGTGGCAATGTCATGGTGTGTCAAGAAG
AGGGGCCCTGTCTTCACTGCAGCATTCAGTCCCCTGGTTCAGATAATGGCAGTCATGTTT
GATATCCCTATTCTGCATGAGCAACTCCATCTTGGAAGTGTGCTAGGATCGGCCACTGTA
ATTGCTGGATTATACATTCTTTTGTGGGGTAAGAAGAAGGATGCAGAGAATTCCTCAATG
GAACTAGTCCAAGAAGCTGAAGAAGTTAAGGACCAAGAGGCACAGTTACAAGTAACCACA
ATCACGAGTGGTTCAAGGTGCCCCTGA

Peptide Sequence

PEP ID

VIT_02s0025g03180.t01
PEP Infomation

pep chromosome:12X:2:2716422:2718224:1 gene:VIT_02s0025g03180 transcript:VIT_02s0025g03180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HUA7]
Sequence

MAGLKSFDTWSPVIVMLAVDFAFAVVNILLKEVLNAEMNHLVLITYRQSISTIFLVPIGY
FWERNSRPKLTLRILCYLFFSALVGASLTQYFFLLGIQYTSATFACAFINMVPAITFIMS
LPFGLEIVNIKTNRGRAKLIGTLVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLS
SGKKTERWTVGSIALMGGTLLWSSWFLIQSNIGKLYPCQYSSTAIMSFFGAIQSAVISLS
MDRNLSLWILKGKTEILTVIYAGVVGSGLCYVAMSWCVKKRGPVFTAAFSPLVQIMAVMF
DIPILHEQLHLGSVLGSATVIAGLYILLWGKKKDAENSSMELVQEAEEVKDQEAQLQVTT
ITSGSRCP

Transcript Sequence

Transcript ID

VIT_02s0025g03180.t01
Transcript Infomation

cdna chromosome:12X:2:2716422:2718224:1 gene:VIT_02s0025g03180 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HUA7]
Sequence

CTGTGACTCCTAGTTTGCTGAAGTGGATGGCTGGATTGAAGAGTTTCGACACATGGAGCC
CTGTTATTGTAATGTTAGCTGTTGATTTTGCCTTCGCGGTTGTAAATATACTTCTCAAGG
AAGTCCTCAATGCAGAAATGAACCATTTGGTCCTCATCACATACCGGCAATCAATTTCTA
CCATTTTCTTGGTCCCCATTGGATACTTTTGGGAAAGGAATAGCCGACCCAAGCTCACAC
TTCGGATCTTATGTTACCTCTTCTTCAGCGCTCTTGTCGGGGCATCACTGACACAATACT
TCTTCCTTCTTGGGATTCAATACACATCTGCTACTTTCGCATGTGCTTTTATCAACATGG
TCCCTGCAATCACATTTATAATGTCATTACCTTTTGGATTAGAGATTGTGAACATAAAAA
CCAACAGGGGGAGAGCAAAATTAATTGGAACCTTGGTATGTATCTGTGGAGCCATGATAC
TGACTCTTTACAAAGGAATGCCTTTAGTTAAATATTCGCGTCCAGAAGCTCCATCTCCAA
CCATGGATCAGGCTATCAGCTTGAGCTCGGGTAAGAAGACAGAGAGATGGACCGTTGGCT
CAATAGCTTTGATGGGAGGCACCCTGTTGTGGTCTTCATGGTTTCTTATTCAGTCAAACA
TTGGCAAGCTATACCCATGTCAGTATTCGAGCACTGCCATCATGTCCTTCTTTGGTGCCA
TTCAATCAGCAGTCATTAGTTTGTCCATGGACAGAAACCTTTCCTTGTGGATTCTGAAAG
GGAAAACAGAAATATTAACAGTTATTTATGCTGGAGTGGTAGGGTCTGGCTTATGCTATG
TGGCAATGTCATGGTGTGTCAAGAAGAGGGGCCCTGTCTTCACTGCAGCATTCAGTCCCC
TGGTTCAGATAATGGCAGTCATGTTTGATATCCCTATTCTGCATGAGCAACTCCATCTTG
GAAGTGTGCTAGGATCGGCCACTGTAATTGCTGGATTATACATTCTTTTGTGGGGTAAGA
AGAAGGATGCAGAGAATTCCTCAATGGAACTAGTCCAAGAAGCTGAAGAAGTTAAGGACC
AAGAGGCACAGTTACAAGTAACCACAATCACGAGTGGTTCAAGGTGCCCCTGA