Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_02s0025g02790.t01
CDS Infomation	cds chromosome:12X:2:2418048:2426185:-1 gene:VIT_02s0025g02790 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:F6HU86]
Sequence	ATGGCGACTCTGACTGCTTCTCACTTCGTATCAAGAACATCGCATGTCAACGGCACCCAG GAAAGCTCGGGCTCGGAGACGAAGTCGTTGGCGCAGATTGGGCTGAGGGGCCAGCGCGCC ACGCACAATGGCTTGAGGCGGTTGAGTGCGAGGACAACTGTGGGGAGGAGCAAGGGGTAT AAGTCTGAGAATGGCAAGGGTTTGCCTTCCGGAGCTATTGTATGTCGAAGTGGGATGAAC TTGGTGTTTGTGGGATGCGAGGTTGGTCCCTGGAGCAAAACCGGTGGTCTTGGTGATGTT CTCGGTGGTCTGCCGCCGGCCATGGCGGCTCGTGGGCACAGGGTTATGTCTGTGAGTCCA CGCTATGACCAGTACAAAGATGCATGGGATACCTGTGTGGTTGTTGAGATTCCAGTTGGG GACAGAATTGAAACTGTTCGCTTTTTCCACTGCTACAAAAGAGGAGTTGATCGTGTCTTC GTGGATCATCCCTGGTTCCTTGAGAAGGTATGGGGAAAAACTGGATCCAAAATTTATGGC CCTAGCGCAGGAGTAGACTACATCGACAATCAAATGCGATTCAGCTTGTTTTGCCAGGCT GTTCTGGAGGCACCACGGATTCTGAATCTAAACAGCAGCAAATATTTCTCAGGACCATAT GGAGAGGATGTTGTCTTCATTGCTAATGACTGGCACACTGCTATTCTTCCATGCTACCTC AAATCAATGTACCAATCTAGTGGAATTTACAGAAATGCCAAGGTAGTGTTTTGCATCCAC AACATTGCCTACCAAGGAAGATTTGCCTTTTCTGATTTCGGATTCCTCAATCTGCCAGAT AGATTCAAGAGCTCTTTTGATTTTATGGATGGGTATAAAAAGCCTGTGAAAGGAAGGAAA ATCAACTGGATGAAGGCTGGAATACTAGAAGCAGACAGAGTTGTAACTGTGAGCCCATAC TACGCCGAGGAACTTGTTTCTGGTGAAGCCAAAGGTGTGGAATTGGACAACATCATTCGG AAGGCTACCATTACTGGAATTGTGAATGGTATGGATGTCCAGGAGTGGAATCCATCCACA GACAAACACATTGGCATTCATTACAATGCCACAACTGTGATGGATGCAAAAGCTCTACTG AAGGAAGCTCTTCAGGCAGAAGTTGGGTTGCCCGTGGACAGGAATATCCCACTGATAGGC TTTATTGGTAGACTAGAAGAGCAGAAAGGTTCAGATATTCTAGCAGCAGCCATTCCAAAA TTCATTGATGAGGATGTTCAGATTGTTGTCCTTGGAACTGGCAAAAAGGCCATGGAGAAA CAGATCGAACAGCTGGAGATTAAATATCCTAACAAGGCCATAGGAGTAGCGAAATTTAAT GTTTCATTGGCCCATATGATCACTGCTGGGGCTGATTTCATGTTGATCCCAAGTAGATTT GAACCATGTGGTCTCATTCAGTTGCATGCTATGAGATATGGAACGGTGCCTATTTGTGCC GCAACTGGTGGGCTTGTCGACACTGTTAAAGAGGGTTTTACAGGATTCCATATGGGACCC TTCAATGTTGAATGTGATAGGATTGACCCAGCTGATGTAGATGCAGTAGCAATAACCGTA AAGAGAGCTCTTGCTACTTATGGCACTGCTGCTTTGGGAGAGATGATACAAAACTGCATG GCCCTAGATCTTTCCTGGAAGGGACCATCCAAGAACTGGGAAGAGCTGCTACTCAGCCTG GGGCCTGCTGGTTGCCAACCTGGTATAGAAGGGGAGGAGATTGCGCCTCTCGCCAAGGAA AATGTTGCCACTCCTTGA

Peptide Sequence

PEP ID	VIT_02s0025g02790.t01
PEP Infomation	pep chromosome:12X:2:2418048:2426185:-1 gene:VIT_02s0025g02790 transcript:VIT_02s0025g02790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:F6HU86]
Sequence	MATLTASHFVSRTSHVNGTQESSGSETKSLAQIGLRGQRATHNGLRRLSARTTVGRSKGY KSENGKGLPSGAIVCRSGMNLVFVGCEVGPWSKTGGLGDVLGGLPPAMAARGHRVMSVSP RYDQYKDAWDTCVVVEIPVGDRIETVRFFHCYKRGVDRVFVDHPWFLEKVWGKTGSKIYG PSAGVDYIDNQMRFSLFCQAVLEAPRILNLNSSKYFSGPYGEDVVFIANDWHTAILPCYL KSMYQSSGIYRNAKVVFCIHNIAYQGRFAFSDFGFLNLPDRFKSSFDFMDGYKKPVKGRK INWMKAGILEADRVVTVSPYYAEELVSGEAKGVELDNIIRKATITGIVNGMDVQEWNPST DKHIGIHYNATTVMDAKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILAAAIPK FIDEDVQIVVLGTGKKAMEKQIEQLEIKYPNKAIGVAKFNVSLAHMITAGADFMLIPSRF EPCGLIQLHAMRYGTVPICAATGGLVDTVKEGFTGFHMGPFNVECDRIDPADVDAVAITV KRALATYGTAALGEMIQNCMALDLSWKGPSKNWEELLLSLGPAGCQPGIEGEEIAPLAKE NVATP

Transcript Sequence

Transcript ID	VIT_02s0025g02790.t01
Transcript Infomation	cdna chromosome:12X:2:2418048:2426185:-1 gene:VIT_02s0025g02790 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:F6HU86]
Sequence	AAGTTCCCTTGGGTTACGGAGCATCTTCTAATTAACGTGCCAGATTGGTTGTGAGACGTG AATGACACCTCTTTTAATATCCAATTAGGCGAGCAATGCTTCGCGTGATTGGGACAAGAT TTTATTGTTTCGTTTTATATCTTTCGTATCTCAAACTTTACGGTCACGATTTAGTCCAAT TGTAGAAATTCTTGGCGTGTTATTGTTTATTACCTACTTGTATGTAAAGAATTTGCATAT GGTAGTGAGTCCATGGATGTATCCCGTGATTCAGTAAAATGCATTGATCTGACTTTAGAT TATCTAAGGATCGTTGTCTTCTGGGAAAGAGACAGAGAATTTGTGCATGCGTCTCTGTTT CGAATTGTGGGGTTAAATTCTTTGTAAACAATCATTATATTAATTATTTCAACAGAAAGG AAGAATGTGCTGAAAGAATATGCCCTTCTTTGAATTGGACCACCCCCACCACGTTTCCCT GTGGCCTCTCCACTCTTTCGACTACTTTCTTTCTTCCTTGTCTTCTAGCCCTAGCCCGCT TTTTCAGCATCACTAAAAATGGCGACTCTGACTGCTTCTCACTTCGTATCAAGAACATCG CATGTCAACGGCACCCAGGAAAGCTCGGGCTCGGAGACGAAGTCGTTGGCGCAGATTGGG CTGAGGGGCCAGCGCGCCACGCACAATGGCTTGAGGCGGTTGAGTGCGAGGACAACTGTG GGGAGGAGCAAGGGGTATAAGTCTGAGAATGGCAAGGGTTTGCCTTCCGGAGCTATTGTA TGTCGAAGTGGGATGAACTTGGTGTTTGTGGGATGCGAGGTTGGTCCCTGGAGCAAAACC GGTGGTCTTGGTGATGTTCTCGGTGGTCTGCCGCCGGCCATGGCGGCTCGTGGGCACAGG GTTATGTCTGTGAGTCCACGCTATGACCAGTACAAAGATGCATGGGATACCTGTGTGGTT GTTGAGATTCCAGTTGGGGACAGAATTGAAACTGTTCGCTTTTTCCACTGCTACAAAAGA GGAGTTGATCGTGTCTTCGTGGATCATCCCTGGTTCCTTGAGAAGGTATGGGGAAAAACT GGATCCAAAATTTATGGCCCTAGCGCAGGAGTAGACTACATCGACAATCAAATGCGATTC AGCTTGTTTTGCCAGGCTGTTCTGGAGGCACCACGGATTCTGAATCTAAACAGCAGCAAA TATTTCTCAGGACCATATGGAGAGGATGTTGTCTTCATTGCTAATGACTGGCACACTGCT ATTCTTCCATGCTACCTCAAATCAATGTACCAATCTAGTGGAATTTACAGAAATGCCAAG GTAGTGTTTTGCATCCACAACATTGCCTACCAAGGAAGATTTGCCTTTTCTGATTTCGGA TTCCTCAATCTGCCAGATAGATTCAAGAGCTCTTTTGATTTTATGGATGGGTATAAAAAG CCTGTGAAAGGAAGGAAAATCAACTGGATGAAGGCTGGAATACTAGAAGCAGACAGAGTT GTAACTGTGAGCCCATACTACGCCGAGGAACTTGTTTCTGGTGAAGCCAAAGGTGTGGAA TTGGACAACATCATTCGGAAGGCTACCATTACTGGAATTGTGAATGGTATGGATGTCCAG GAGTGGAATCCATCCACAGACAAACACATTGGCATTCATTACAATGCCACAACTGTGATG GATGCAAAAGCTCTACTGAAGGAAGCTCTTCAGGCAGAAGTTGGGTTGCCCGTGGACAGG AATATCCCACTGATAGGCTTTATTGGTAGACTAGAAGAGCAGAAAGGTTCAGATATTCTA GCAGCAGCCATTCCAAAATTCATTGATGAGGATGTTCAGATTGTTGTCCTTGGAACTGGC AAAAAGGCCATGGAGAAACAGATCGAACAGCTGGAGATTAAATATCCTAACAAGGCCATA GGAGTAGCGAAATTTAATGTTTCATTGGCCCATATGATCACTGCTGGGGCTGATTTCATG TTGATCCCAAGTAGATTTGAACCATGTGGTCTCATTCAGTTGCATGCTATGAGATATGGA ACGGTGCCTATTTGTGCCGCAACTGGTGGGCTTGTCGACACTGTTAAAGAGGGTTTTACA GGATTCCATATGGGACCCTTCAATGTTGAATGTGATAGGATTGACCCAGCTGATGTAGAT GCAGTAGCAATAACCGTAAAGAGAGCTCTTGCTACTTATGGCACTGCTGCTTTGGGAGAG ATGATACAAAACTGCATGGCCCTAGATCTTTCCTGGAAGGGACCATCCAAGAACTGGGAA GAGCTGCTACTCAGCCTGGGGCCTGCTGGTTGCCAACCTGGTATAGAAGGGGAGGAGATT GCGCCTCTCGCCAAGGAAAATGTTGCCACTCCTTGAGGGCAGGCCGCCCTTAATGCCGCT AATGCTATCCATTGACTACCTCATCCATGTACCAGCAAATAGCCCTTAGCTGTGTTGATA AGCTCCAGTTTCACACGAGCTACGGATCTGTTAAAAACTTGGTTTGCAGGAGTTAGGGTG TGTTGAAGGTGGATGATAGCGGGGGTGCAAGTAAATAATGCATTGAAAATAGTATGTGGC TACGCTATCTTTGTGTTGGAGTTGAGAAAGCTCTCACTTCAGAAGCAGAGTAAATAAAAA TATGTAGTTCTTTCTTCCATTTGAAGCTCCTCTAGGTATGCTAACAGCCTAGCCCATGTA TAATACTTCAGTTTGTAATGCGAGTTTTCAAAAATCTTTTGCCGCAATGTTTCTGCTGTT CGATGGCAAAAAGAATGGTT