Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g02570.t01
CDS Infomation

cds chromosome:12X:2:2231728:2233589:-1 gene:VIT_02s0025g02570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACACAGGTTGAGAGCTTGTGGGTTTTGGCTCTTGCTGCCAAATGCAGAGCTTTC
TCTTCTGAAACTGTCCTCGTTTTTGGGTTTGCGCTGTGTTTGGTTTGGTTTGCTGTGGTT
TTGTCCCACTGGGCTTACCCGGGAGGCCAAGCTTGGGGGAGGTACTGGAGCAAGAGAGGA
AGTAAAGCTGAGGCCATCATCCCAGGGCCGCGAGGGCTTCCAGTGGTGGGGAGCATGAGT
CTCATGGTGAACCTCGCTCATCACAACCTCGCGGCTGCTGCCGAGCGGCTAGGAGCGATG
AGGCTCATGGCGTTCAGCCTTGGCGAGACTCGAGCCATCGTTACGAGCAACCCAGACGTG
GCGAAAGAGATTTTGAACAGCTCGGCGTTTGCGGATCGGCCAGTGAAGGAGTGTGCGTAC
AGTCTGATGTTCAACCGCGCAATTGGATTCGCTCCCTATGGAGTTTACTGGCGAACCCTG
CGGAGAATTGCCGCCACCCATCTCTTCTCTCCCAAACAAATCACTGCCTCGGAGACTCAG
AGGTCCGAAATCGCTGCCCAGATGGTGTCACTCGTTGGCAGCTGTATTGGAGACATCCGC
GTCCGCGATATTCTGAAGCGAGCTTCACTTCACCACATGATGTCCTCCGTATTCGGAAGC
AAATACCGACTGGGTTCCTCAAATTCCGAAACGGATGAACTTAGTAGACTCGTCGAAGAA
GGCTACGATCTCCTTGGCAAGCTCAACTGGTCCGACCACCTCCCTTGGCTTGCAGGGCTC
GACCCTCAGAAAATCCGATTCAGATGCTCCAAACTCGTCCCCAGAGTGAATCGGTTCGTG
AACCGGATCATCACTGAACATAGAGCTCAACCCGGCCCAACAACCCGAGATTTCGTCGAT
GTCCTACTCTCCCTTCAACAACCCGATAAGTTGTTGGATTCCGATATAATCGCCGTCTTA
TGGGAGATGATATTTCGGGGAACGGATACGGTGGCAGTTTTGATAGAGTGGATACTCGCA
AGGATGGTACTCCACCCTGAGTGCCAATCAAGGGTCCACGATGAGCTGGATAGGGTGGTC
GGAAAGTCACGGCCGGTGAAGGAATCCGACATTCCGGCGATGGTATACCTGGCGGCGGTC
GTGAAGGAGGTTCTGAGGCTGCACCCACCGGGCCCACTGCTCTCGTGGGCCCGTTTATCA
ATCACAGATACCACGGTGGATGGCTATCACGTGCCTGCCGGGTCCACAGCGATGGTTAAC
ATGTGGGCCATCACACGGGATCCACGAGTGTGGTCAGATCCACTCGACTTCACGCCCGAC
AGATTCGTGACCACCCCTGCTGACGTGGAATTCTCCTTGTTTGGATCCGATCTCAGGCTC
GCTCCATTCGGGTCGGGCAGAAGAACCTGCCCCGGAAAGACCCTTGGCTTGACCACAGCC
ACCTTTTGGGTGGCGTCGCTGTTACATGAGTTCGAGTGGGTTCCATCCGACCCAAACCCG
GTGGATCTATCCGAAGTGCTGAGGCTATCCTGCGAAATGGCACACCCTCTGACTGTGAGG
GTGCGGCCCAGGCGAATATGA

Peptide Sequence

PEP ID

VIT_02s0025g02570.t01
PEP Infomation

pep chromosome:12X:2:2231728:2233589:-1 gene:VIT_02s0025g02570 transcript:VIT_02s0025g02570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTQVESLWVLALAAKCRAFSSETVLVFGFALCLVWFAVVLSHWAYPGGQAWGRYWSKRG
SKAEAIIPGPRGLPVVGSMSLMVNLAHHNLAAAAERLGAMRLMAFSLGETRAIVTSNPDV
AKEILNSSAFADRPVKECAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFSPKQITASETQ
RSEIAAQMVSLVGSCIGDIRVRDILKRASLHHMMSSVFGSKYRLGSSNSETDELSRLVEE
GYDLLGKLNWSDHLPWLAGLDPQKIRFRCSKLVPRVNRFVNRIITEHRAQPGPTTRDFVD
VLLSLQQPDKLLDSDIIAVLWEMIFRGTDTVAVLIEWILARMVLHPECQSRVHDELDRVV
GKSRPVKESDIPAMVYLAAVVKEVLRLHPPGPLLSWARLSITDTTVDGYHVPAGSTAMVN
MWAITRDPRVWSDPLDFTPDRFVTTPADVEFSLFGSDLRLAPFGSGRRTCPGKTLGLTTA
TFWVASLLHEFEWVPSDPNPVDLSEVLRLSCEMAHPLTVRVRPRRI

Transcript Sequence

Transcript ID

VIT_02s0025g02570.t01
Transcript Infomation

cdna chromosome:12X:2:2231728:2233589:-1 gene:VIT_02s0025g02570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACACAGGTTGAGAGCTTGTGGGTTTTGGCTCTTGCTGCCAAATGCAGAGCTTTC
TCTTCTGAAACTGTCCTCGTTTTTGGGTTTGCGCTGTGTTTGGTTTGGTTTGCTGTGGTT
TTGTCCCACTGGGCTTACCCGGGAGGCCAAGCTTGGGGGAGGTACTGGAGCAAGAGAGGA
AGTAAAGCTGAGGCCATCATCCCAGGGCCGCGAGGGCTTCCAGTGGTGGGGAGCATGAGT
CTCATGGTGAACCTCGCTCATCACAACCTCGCGGCTGCTGCCGAGCGGCTAGGAGCGATG
AGGCTCATGGCGTTCAGCCTTGGCGAGACTCGAGCCATCGTTACGAGCAACCCAGACGTG
GCGAAAGAGATTTTGAACAGCTCGGCGTTTGCGGATCGGCCAGTGAAGGAGTGTGCGTAC
AGTCTGATGTTCAACCGCGCAATTGGATTCGCTCCCTATGGAGTTTACTGGCGAACCCTG
CGGAGAATTGCCGCCACCCATCTCTTCTCTCCCAAACAAATCACTGCCTCGGAGACTCAG
AGGTCCGAAATCGCTGCCCAGATGGTGTCACTCGTTGGCAGCTGTATTGGAGACATCCGC
GTCCGCGATATTCTGAAGCGAGCTTCACTTCACCACATGATGTCCTCCGTATTCGGAAGC
AAATACCGACTGGGTTCCTCAAATTCCGAAACGGATGAACTTAGTAGACTCGTCGAAGAA
GGCTACGATCTCCTTGGCAAGCTCAACTGGTCCGACCACCTCCCTTGGCTTGCAGGGCTC
GACCCTCAGAAAATCCGATTCAGATGCTCCAAACTCGTCCCCAGAGTGAATCGGTTCGTG
AACCGGATCATCACTGAACATAGAGCTCAACCCGGCCCAACAACCCGAGATTTCGTCGAT
GTCCTACTCTCCCTTCAACAACCCGATAAGTTGTTGGATTCCGATATAATCGCCGTCTTA
TGGGAGATGATATTTCGGGGAACGGATACGGTGGCAGTTTTGATAGAGTGGATACTCGCA
AGGATGGTACTCCACCCTGAGTGCCAATCAAGGGTCCACGATGAGCTGGATAGGGTGGTC
GGAAAGTCACGGCCGGTGAAGGAATCCGACATTCCGGCGATGGTATACCTGGCGGCGGTC
GTGAAGGAGGTTCTGAGGCTGCACCCACCGGGCCCACTGCTCTCGTGGGCCCGTTTATCA
ATCACAGATACCACGGTGGATGGCTATCACGTGCCTGCCGGGTCCACAGCGATGGTTAAC
ATGTGGGCCATCACACGGGATCCACGAGTGTGGTCAGATCCACTCGACTTCACGCCCGAC
AGATTCGTGACCACCCCTGCTGACGTGGAATTCTCCTTGTTTGGATCCGATCTCAGGCTC
GCTCCATTCGGGTCGGGCAGAAGAACCTGCCCCGGAAAGACCCTTGGCTTGACCACAGCC
ACCTTTTGGGTGGCGTCGCTGTTACATGAGTTCGAGTGGGTTCCATCCGACCCAAACCCG
GTGGATCTATCCGAAGTGCTGAGGCTATCCTGCGAAATGGCACACCCTCTGACTGTGAGG
GTGCGGCCCAGGCGAATATGATAGCTCAGATTAGATTCCAACATGATGTAAATACATGCA
AGTGGCTTTAGATCTCAACCGTCCACTCCACCTCCTCCTCCTCTTTTCCTTTTTTGTGAG
TCGAATGTTTTGCCATGCTAGCTAGCATAAAGTGTACTTTTTCTTTTCTTTCATGTACAC
CATATATGTGGCAGTGTATCCTAAGTTCAACTCCTTAAATC