Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g02090.t01
CDS Infomation

cds chromosome:12X:2:1865312:1872618:-1 gene:VIT_02s0025g02090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGGGACTGGTTTCCGTCAAGACTCCGCCGGATGCATCCCCGCTGACGATTTCTGTT
ACGGAAGCCGGATCGGTTTCTGAATCACGAAATTCTAAATTCGCATCTTCGACTCCAAAG
AAGACTCCATCGCCATCCACTTCGCGATCCAGGCCCTCGCCGGATCGGAAGAAGAAGCCG
CCGGAGAGTCCGGTTTTGGACGAGTCCTCGCTGGATAATCCGGATCTCGGTCCTTTCCTT
CTGAAGCTGGCGCGCGACGCCATCGCGTCCGGGGACGGGCCAAACAAAGCGTTGGAGTAC
GCGCTCCGGGCGTCGAAGTCATTCGAGCGTTGCGCGGCGGAGGGGGAGCCCAGTTTGGAC
CTGGCGATGAGTTTGCACGTTGTGGCGGCGATTTACTGCAGTTTGGGAAGGTTTGAAGAG
GCGATTCCGGTGCTAGAGCGGGCGATTGGGGTGCCGGAGGTGGCGAGAGGTGCGGATCAC
GCGCTTGCGGCGTTTTCGGGGTATATGCAGCTCGGAGATACGTTTTCGATGCTTGGACAG
GTTGAACGGTCGATTCATTGTTACGAGGAAGGGTTGAAGATACAGATTGAGGCTTTGGGA
GAGACGGATCCCAGAGTTGGAGAGACTTGCAGGTACTTAGCCGAGGCCCGTGTTCAAGCA
ATGCAATTTGATGAAGCTGAAAGCCTATGCAAGAAAACTCTTGAGATTCACAGTGTGCAC
AGTGAACCAGCATCTCTTGAAGAGGCAGCTGATCGTCGGCTGATGGCCCTCATATGTGAG
GCAAAGGGAGATTATGAATCAGCCCTTGAGCATCTTGTTCTTGCCAGCATGGCAATGATT
GCCAATGGACAAGACAATGAGGTTGCTGCTATTGATGTCAGCATTGGTAACATTTATCTT
TCCCTTTGCCGCTATGATGAGGCTATCTTCTCTTACCAGAAGGCCCTCACTGTCTTCAAA
TCATCAAGAGGTGACAACCATCCTTCTGTTGCCTCTGTTTTTGTACGCCTTGCTGAACTA
TACTACAAGACAGGAAAGCTTCGGGAGTCCGGATCTTACTGTGAAAATGCACTGAGGATA
TATGCAAAACCTGTGCCAGGAACCACAGCAGAAGAGATTGCAGGTGGAATGACTGAAATT
TCAGCCATTTATGAGTCTATAAATGAGCCTGAGGAAGCACTAAAGCTCTTGCAGAAGGCA
CTGAAATTGTTGGAGGATAAACCAGGACAACAAAGCACAATTGCAGGAATAGAAGCACGG
ATGGGTGTAATGTTTTACTTGGTTGGGAGGTATGGTGAAGCACGGAGCTCTTTTGAGAGT
GCTGTAGCGAAACTTAGGGCCAGTGGGGAGAGGAAATCACCCTTCTTTGGGGTCGTGTTG
AACCAGATGGGATTGGCTTGTGTACAGTTGTTCAAGATAGATGAGGCTGTTGAGTTGTTT
GAAGAAGCAAGGGGAATACTTGAAAAGGAGTGTGGTCCATGTCACCAAGATACCATTGGA
GTATATACCAATCTCGCGGCAACTTATGATGCTATGGGCAGAGTCGAAGATGCAATTGAG
ATACTGGAGTATGTTCTCAAATTGAGAGAAGAACAGCTTGGAACAGCAAACCCTGATTTT
GATGATGAGAAGAAAAGGTTATCTGAGCTCCTGAAGGAAGCAGGCAAGGCCCGTAACAGA
AAAGCAAAGTCTCTGCAAAACCTCATTGATCCTAACTCCAAGAGGACAAAAAAAGAAACA
AAGAGATGGTCTGGTTTAGGTTTCAGAATTGGATAA

Peptide Sequence

PEP ID

VIT_02s0025g02090.t01
PEP Infomation

pep chromosome:12X:2:1865312:1872618:-1 gene:VIT_02s0025g02090 transcript:VIT_02s0025g02090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPGLVSVKTPPDASPLTISVTEAGSVSESRNSKFASSTPKKTPSPSTSRSRPSPDRKKKP
PESPVLDESSLDNPDLGPFLLKLARDAIASGDGPNKALEYALRASKSFERCAAEGEPSLD
LAMSLHVVAAIYCSLGRFEEAIPVLERAIGVPEVARGADHALAAFSGYMQLGDTFSMLGQ
VERSIHCYEEGLKIQIEALGETDPRVGETCRYLAEARVQAMQFDEAESLCKKTLEIHSVH
SEPASLEEAADRRLMALICEAKGDYESALEHLVLASMAMIANGQDNEVAAIDVSIGNIYL
SLCRYDEAIFSYQKALTVFKSSRGDNHPSVASVFVRLAELYYKTGKLRESGSYCENALRI
YAKPVPGTTAEEIAGGMTEISAIYESINEPEEALKLLQKALKLLEDKPGQQSTIAGIEAR
MGVMFYLVGRYGEARSSFESAVAKLRASGERKSPFFGVVLNQMGLACVQLFKIDEAVELF
EEARGILEKECGPCHQDTIGVYTNLAATYDAMGRVEDAIEILEYVLKLREEQLGTANPDF
DDEKKRLSELLKEAGKARNRKAKSLQNLIDPNSKRTKKETKRWSGLGFRIG

Transcript Sequence

Transcript ID

VIT_02s0025g02090.t01
Transcript Infomation

cdna chromosome:12X:2:1865312:1872618:-1 gene:VIT_02s0025g02090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTGTAATCTCCATAATCAAACTCATAATCCAAATCTAAATCTTCAATCCTCTCTTTCTC
TCTCTCTCTCTGATTTTTATTGTCAGATTTGCTGATTTGATTTTTTGAATCTTCTTCAAA
GGTTTGAATCCAGAACTCCCAGATCTCCTTGGATCACGATGCCGGGACTGGTTTCCGTCA
AGACTCCGCCGGATGCATCCCCGCTGACGATTTCTGTTACGGAAGCCGGATCGGTTTCTG
AATCACGAAATTCTAAATTCGCATCTTCGACTCCAAAGAAGACTCCATCGCCATCCACTT
CGCGATCCAGGCCCTCGCCGGATCGGAAGAAGAAGCCGCCGGAGAGTCCGGTTTTGGACG
AGTCCTCGCTGGATAATCCGGATCTCGGTCCTTTCCTTCTGAAGCTGGCGCGCGACGCCA
TCGCGTCCGGGGACGGGCCAAACAAAGCGTTGGAGTACGCGCTCCGGGCGTCGAAGTCAT
TCGAGCGTTGCGCGGCGGAGGGGGAGCCCAGTTTGGACCTGGCGATGAGTTTGCACGTTG
TGGCGGCGATTTACTGCAGTTTGGGAAGGTTTGAAGAGGCGATTCCGGTGCTAGAGCGGG
CGATTGGGGTGCCGGAGGTGGCGAGAGGTGCGGATCACGCGCTTGCGGCGTTTTCGGGGT
ATATGCAGCTCGGAGATACGTTTTCGATGCTTGGACAGGTTGAACGGTCGATTCATTGTT
ACGAGGAAGGGTTGAAGATACAGATTGAGGCTTTGGGAGAGACGGATCCCAGAGTTGGAG
AGACTTGCAGGTACTTAGCCGAGGCCCGTGTTCAAGCAATGCAATTTGATGAAGCTGAAA
GCCTATGCAAGAAAACTCTTGAGATTCACAGTGTGCACAGTGAACCAGCATCTCTTGAAG
AGGCAGCTGATCGTCGGCTGATGGCCCTCATATGTGAGGCAAAGGGAGATTATGAATCAG
CCCTTGAGCATCTTGTTCTTGCCAGCATGGCAATGATTGCCAATGGACAAGACAATGAGG
TTGCTGCTATTGATGTCAGCATTGGTAACATTTATCTTTCCCTTTGCCGCTATGATGAGG
CTATCTTCTCTTACCAGAAGGCCCTCACTGTCTTCAAATCATCAAGAGGTGACAACCATC
CTTCTGTTGCCTCTGTTTTTGTACGCCTTGCTGAACTATACTACAAGACAGGAAAGCTTC
GGGAGTCCGGATCTTACTGTGAAAATGCACTGAGGATATATGCAAAACCTGTGCCAGGAA
CCACAGCAGAAGAGATTGCAGGTGGAATGACTGAAATTTCAGCCATTTATGAGTCTATAA
ATGAGCCTGAGGAAGCACTAAAGCTCTTGCAGAAGGCACTGAAATTGTTGGAGGATAAAC
CAGGACAACAAAGCACAATTGCAGGAATAGAAGCACGGATGGGTGTAATGTTTTACTTGG
TTGGGAGGTATGGTGAAGCACGGAGCTCTTTTGAGAGTGCTGTAGCGAAACTTAGGGCCA
GTGGGGAGAGGAAATCACCCTTCTTTGGGGTCGTGTTGAACCAGATGGGATTGGCTTGTG
TACAGTTGTTCAAGATAGATGAGGCTGTTGAGTTGTTTGAAGAAGCAAGGGGAATACTTG
AAAAGGAGTGTGGTCCATGTCACCAAGATACCATTGGAGTATATACCAATCTCGCGGCAA
CTTATGATGCTATGGGCAGAGTCGAAGATGCAATTGAGATACTGGAGTATGTTCTCAAAT
TGAGAGAAGAACAGCTTGGAACAGCAAACCCTGATTTTGATGATGAGAAGAAAAGGTTAT
CTGAGCTCCTGAAGGAAGCAGGCAAGGCCCGTAACAGAAAAGCAAAGTCTCTGCAAAACC
TCATTGATCCTAACTCCAAGAGGACAAAAAAAGAAACAAAGAGATGGTCTGGTTTAGGTT
TCAGAATTGGATAAAGGATCGTCTTTCACTTACTCTCTGTTTTCTCACACGTGCGCATTC
TGTACCATAGAAGACAATGTATAGGGTTGTAATTTGGTGAGGCTTCCTGTTTCTTGAGCT
TGAGATCTCGGTTTGTTTTTCTTTCTGTTAATTATTTGATTGAATATTTGTGTTGTGACC
CTGAAACCGTTCATTGAGAAAAAATTCATTTGGAGTGAATAAATT