Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_02s0025g01610.t01
CDS Infomation

cds chromosome:12X:2:1560083:1563233:-1 gene:VIT_02s0025g01610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGTGGCTGCTGTTGCATCGAGTCCCATTCGCGGTGAATCGGTACATTCACCGGGT
TTTTTCCATGGCCAACCAGAGCCTTGCTCCAGCGAATCAATCCTAGTTTATCTCACTGTC
GCCGGTTCTGTGATTCCTCTGCGTGTTTTGGAGTCCGATTCGATAGCGTCAGTGAAATTT
AGGATCCAGATATGTCAAGGGTTTGTAGTGAAGAAACAGAAGCTAGTTTTTGGGGGAAGA
GAGTTAGCAAGAAACGATTCTCTTGTTAGGGATTACGGTGTCACCAGTGGGAATGTTCTG
CATTTGGTTCTTAAGCTATCAGATCTCCTGGCCATCACCGTTAGAACCGCATGTGGGAAG
GAATTCGAGTTTCATGTGGATAGATATAGTAATGTTGGGTACCTCAAGCAACGAATTGTA
AAAACCAGGAAATGCTTTGTTGATCTTGAGGATCATGAATTTTTCTGCAATGGAAATAAG
CTGGATGACCAGGTTCTCATTGATGATATCTGTACCAGTGATCCTATCATTCATCTGTTG
GTTCAGAAATCGGCTAAGGTCAGAGCCAAGCCTGTTGACAAAGATTTTGAGCTATCAGTT
GTTGCAGAAGATAGAAATGAAGGGACAAGAGATGGAGCCAATGAAGGAGAGAATCGATCT
GAGGAGCAGCTTCAGGTTGTGGAGAAGGAGCCACCAGATAGAGATTTCTGGTTGGAACCT
ATCATTGTTAATCCGAAGCTCAAGTTCCCTTCATTTATTTGGGATTTGATCAACTCCACA
TTTGATGGATTGGACAGTGGGAACCACCCAATCTTATCGTCTGAGGGAACCGGAGGAACT
TATTTCATGCAAGATTCGTTGGGTCTCAAGTATGTTTCTGTTTTCAAGCCCATGGATGAG
GAGCCCATGGCTGTTAATAATCCTAGAGGGTTGCCTGCATCCTCAAATGGTGAAGGATTG
AAAAGGGGGACAAGAGTAGGAGAAGGAGCAGTGAGGGAAGTTGCAGCATACGTACTGGAT
CATCCGAAGAGTGGGCCTCGATTGTTTTCAGATGAAGAGATTGGCTTTGCAGGTGTTCCA
CCTACTGTAATGGTTCAGTGCTTGCACAAAGGATTGAACCATCCAGAAGGGTATGAGTGC
TCAGAAGAGAAGGTCAAGATTGGATCATTGCAGAAGTTCATGAACAGCCATGGAAGTTGC
GAGGACATGGGCCCTGGGGCTTTCCCTGTAGAGGAGGTCCATAAGATTAGTGTTTTTGAT
ATAAGAATGGCGAATACAGATAGGCATGCTGGGAATATTCTGGTGAACAAAGAGGGTAAA
GATGGCCAGATTGTGCTTATTCCAATTGATCACGGATATTGCTTGCCTGAGAATTTTGAA
GATTGCACTTTTGATTGGCTTTACTGGCCACAAGCCCGCCAGCCTTTCTCCCTGGACACC
ATTGACTACATAAACTCACTGGATGCTGAGCAAGATATCGCACTTCTGAAATTCTGTGGT
TGGGAGCTTTCCCTTGAATGTGCCCGCACGCTTCGCATCTCCACCATGCTTCTGAAGAAA
GGTGCACAGAGGGGTCTTACTCCTTTTGTAATTGGAAGCATCATGTGCAGAGTAACCTTG
AACAAGGAATCTGTCATTGAGGAGATTGTTCAGGAAGCCCAGGATTCCTTGCTTCCTGGA
ATGAGTGAAGCTGCATTTCTTGAGACCATCTCCCAGCTGATTGATACCCGACTTGACAAG
CTTATGAAATAA

Peptide Sequence

PEP ID

VIT_02s0025g01610.t01
PEP Infomation

pep chromosome:12X:2:1560083:1563233:-1 gene:VIT_02s0025g01610 transcript:VIT_02s0025g01610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVAAVASSPIRGESVHSPGFFHGQPEPCSSESILVYLTVAGSVIPLRVLESDSIASVKF
RIQICQGFVVKKQKLVFGGRELARNDSLVRDYGVTSGNVLHLVLKLSDLLAITVRTACGK
EFEFHVDRYSNVGYLKQRIVKTRKCFVDLEDHEFFCNGNKLDDQVLIDDICTSDPIIHLL
VQKSAKVRAKPVDKDFELSVVAEDRNEGTRDGANEGENRSEEQLQVVEKEPPDRDFWLEP
IIVNPKLKFPSFIWDLINSTFDGLDSGNHPILSSEGTGGTYFMQDSLGLKYVSVFKPMDE
EPMAVNNPRGLPASSNGEGLKRGTRVGEGAVREVAAYVLDHPKSGPRLFSDEEIGFAGVP
PTVMVQCLHKGLNHPEGYECSEEKVKIGSLQKFMNSHGSCEDMGPGAFPVEEVHKISVFD
IRMANTDRHAGNILVNKEGKDGQIVLIPIDHGYCLPENFEDCTFDWLYWPQARQPFSLDT
IDYINSLDAEQDIALLKFCGWELSLECARTLRISTMLLKKGAQRGLTPFVIGSIMCRVTL
NKESVIEEIVQEAQDSLLPGMSEAAFLETISQLIDTRLDKLMK

Transcript Sequence

Transcript ID

VIT_02s0025g01610.t01
Transcript Infomation

cdna chromosome:12X:2:1560083:1563233:-1 gene:VIT_02s0025g01610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTCACCGACGTTCAACCCGGAGGAGAAAAACTCGCCGAAGATCGCACCTGTGAATTGGT
GACCAAAACGAGCCTAATTTTGGAAAAAGTGGAAAATCGGTTCGATTCATCGCCAATCAA
TTGCCATCTCTGCAGCACCTCTCTTTCATTTTCTTGTTCTCCAATATAAGTTCTTATCCT
TCACTCTTTGGCCTCTGATTCTTCCCCTTTTGGTAAGAATCCACTCTCCATTTCCATTTC
TCTAGGTTATCAAAATTTCCCAGTTCATCTCACTCTCTGAAACCCTTAATGCACATATTT
TCATAGGTTTGGAAGCCCCGGGAGCTGAAATTTGTGAATTTGATATCTGGATTGTGGTTG
ATTTGAGTGATGCAGTTCGATTCCTGAGGCTGTTGGAGGTTTTTGAGAGTTTGAGTTGTT
GAATCTTTGGAATTGTAATTCCTTTGTTGGGAATTTTAGATTTTCGCCTTTTTCCAATTT
TTGATTTGTGTATAGCTTTGTATCTTTGATGTTCTGTGTATTTGGGTTTGAAGGATTCAG
TGGATTTCATTGTTAATGGTCTTGTTGTATTGAATCATTCATACCTATTGATTGATGGGT
ACTGAAGCTTGTAATTTGAATTAGGCAAAAGAAGGTTCAGGGTTTCTGGGCTTTGAGAAA
AATGTCTGTGGCTGCTGTTGCATCGAGTCCCATTCGCGGTGAATCGGTACATTCACCGGG
TTTTTTCCATGGCCAACCAGAGCCTTGCTCCAGCGAATCAATCCTAGTTTATCTCACTGT
CGCCGGTTCTGTGATTCCTCTGCGTGTTTTGGAGTCCGATTCGATAGCGTCAGTGAAATT
TAGGATCCAGATATGTCAAGGGTTTGTAGTGAAGAAACAGAAGCTAGTTTTTGGGGGAAG
AGAGTTAGCAAGAAACGATTCTCTTGTTAGGGATTACGGTGTCACCAGTGGGAATGTTCT
GCATTTGGTTCTTAAGCTATCAGATCTCCTGGCCATCACCGTTAGAACCGCATGTGGGAA
GGAATTCGAGTTTCATGTGGATAGATATAGTAATGTTGGGTACCTCAAGCAACGAATTGT
AAAAACCAGGAAATGCTTTGTTGATCTTGAGGATCATGAATTTTTCTGCAATGGAAATAA
GCTGGATGACCAGGTTCTCATTGATGATATCTGTACCAGTGATCCTATCATTCATCTGTT
GGTTCAGAAATCGGCTAAGGTCAGAGCCAAGCCTGTTGACAAAGATTTTGAGCTATCAGT
TGTTGCAGAAGATAGAAATGAAGGGACAAGAGATGGAGCCAATGAAGGAGAGAATCGATC
TGAGGAGCAGCTTCAGGTTGTGGAGAAGGAGCCACCAGATAGAGATTTCTGGTTGGAACC
TATCATTGTTAATCCGAAGCTCAAGTTCCCTTCATTTATTTGGGATTTGATCAACTCCAC
ATTTGATGGATTGGACAGTGGGAACCACCCAATCTTATCGTCTGAGGGAACCGGAGGAAC
TTATTTCATGCAAGATTCGTTGGGTCTCAAGTATGTTTCTGTTTTCAAGCCCATGGATGA
GGAGCCCATGGCTGTTAATAATCCTAGAGGGTTGCCTGCATCCTCAAATGGTGAAGGATT
GAAAAGGGGGACAAGAGTAGGAGAAGGAGCAGTGAGGGAAGTTGCAGCATACGTACTGGA
TCATCCGAAGAGTGGGCCTCGATTGTTTTCAGATGAAGAGATTGGCTTTGCAGGTGTTCC
ACCTACTGTAATGGTTCAGTGCTTGCACAAAGGATTGAACCATCCAGAAGGGTATGAGTG
CTCAGAAGAGAAGGTCAAGATTGGATCATTGCAGAAGTTCATGAACAGCCATGGAAGTTG
CGAGGACATGGGCCCTGGGGCTTTCCCTGTAGAGGAGGTCCATAAGATTAGTGTTTTTGA
TATAAGAATGGCGAATACAGATAGGCATGCTGGGAATATTCTGGTGAACAAAGAGGGTAA
AGATGGCCAGATTGTGCTTATTCCAATTGATCACGGATATTGCTTGCCTGAGAATTTTGA
AGATTGCACTTTTGATTGGCTTTACTGGCCACAAGCCCGCCAGCCTTTCTCCCTGGACAC
CATTGACTACATAAACTCACTGGATGCTGAGCAAGATATCGCACTTCTGAAATTCTGTGG
TTGGGAGCTTTCCCTTGAATGTGCCCGCACGCTTCGCATCTCCACCATGCTTCTGAAGAA
AGGTGCACAGAGGGGTCTTACTCCTTTTGTAATTGGAAGCATCATGTGCAGAGTAACCTT
GAACAAGGAATCTGTCATTGAGGAGATTGTTCAGGAAGCCCAGGATTCCTTGCTTCCTGG
AATGAGTGAAGCTGCATTTCTTGAGACCATCTCCCAGCTGATTGATACCCGACTTGACAA
GCTTATGAAATAATTGTCATGGGGTTTATATTATAGGTATATAACTATATATATGTATGT
AGAGTTGAAATGACCAGTCCATTTTTTGGGTGGACCGCTGAGTTGTATGAAATGCCAATG
GCTTCTGACCACTACACTGGTGAAGCCTTGACTTTCTTTCACTTCTGTTCTTTCCATTGT
TGAGACTATTAAGAAGTTGAACAGAGGATTAAGCTTATGAATAATATCCGTTCTGTTCGG
TTTTCATGTA